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IVF0024062 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024062
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPhotosystem I iron-sulfur center
Genome locationchr03:3439745..3439990
RNA-Seq ExpressionIVF0024062
SyntenyIVF0024062
Gene Ontology termsGO:0009773 - photosynthetic electron transport in photosystem I (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009055 - electron transfer activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR017491 - Photosystem I protein PsaC
IPR017896 - 4Fe-4S ferredoxin-type, iron-sulphur binding domain
IPR017900 - 4Fe-4S ferredoxin, iron-sulphur binding, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
YP_001122848.1 photosystem I subunit VII [Phaseolus vulgaris]1.14e-5088.89Show/hide
Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQI S PRT+DC G KRCES CPT FLSVR+YLWHETTRS+GLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
YP_009138437.1 photosystem I subunit VII [Lathyrus davidii]3.27e-5087.65Show/hide
Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
        M+HSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQI S PRT+DC G KRCES CPT FLSVR+YLWHETTRS+GLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
YP_009141471.1 photosystem I subunit VII [Lathyrus tingitanus]8.03e-5190.12Show/hide
Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQI S PRT+DC G KRCES CPT FLSVRIYLWHETTRS+GLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
YP_009334710.1 photosystem I subunit VII [Camassia scilloides]3.27e-5087.65Show/hide
Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQI S PRT+DC G KRCES CPT FLSVR+YLWHETTRS+GL+Y
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
YP_009528483.1 photosystem I subunit VII [Capsicum baccatum var. praetermissum]2.30e-5088.89Show/hide
Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPW GCKAKQI STPRT+DC G KRCES CPT FLSVR+YLWHETTRS+GLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
TrEMBL top hitse value%identityAlignment
A0A0F6NKX4 Photosystem I iron-sulfur center1.4e-3790.12Show/hide
Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQI S PRT+DC G KRCES CPT FLSVRIYLWHETTRS+GLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
A0A218KGA0 Photosystem I iron-sulfur center1.9e-3788.89Show/hide
Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQI S PRT+DC G KRCES CPT FLSVR+YLWHETTRS+GLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
A0A410HFC6 Photosystem I iron-sulfur center1.9e-3788.89Show/hide
Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQI S PRT+DC G KRCES CPT FLSVR+YLWHETTRS+GLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
D5MAH2 Photosystem I iron-sulfur center1.9e-3788.89Show/hide
Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQI S PRT+DC G KRCES CPT FLSVR+YLWHETTRS+GLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
G3ETV0 Photosystem I iron-sulfur center1.9e-3788.89Show/hide
Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQI S PRT+DC G KRCES CPT FLSVR+YLWHETTRS+GLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
SwissProt top hitse value%identityAlignment
A4GGE7 Photosystem I iron-sulfur center5.1e-4088.89Show/hide
Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQI S PRT+DC G KRCES CPT FLSVR+YLWHETTRS+GLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
A4QJG7 Photosystem I iron-sulfur center3.3e-3987.65Show/hide
Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPW GCKAKQI S PRT+DC G KRCES CPT FLSVR+YLWHETTRS+GLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
A4QJQ1 Photosystem I iron-sulfur center3.3e-3987.65Show/hide
Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPW GCKAKQI S PRT+DC G KRCES CPT FLSVR+YLWHETTRS+GLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
P10793 Photosystem I iron-sulfur center5.1e-4088.89Show/hide
Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQI S PRT+DC G KRCES CPT FLSVR+YLWHETTRS+GLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
P42046 Photosystem I iron-sulfur center5.1e-4088.89Show/hide
Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQI S PRT+DC G KRCES CPT FLSVR+YLWHETTRS+GLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
Arabidopsis top hitse value%identityAlignment
ATCG01060.1 iron-sulfur cluster binding;electron carriers;4 iron, 4 sulfur cluster binding2.4e-4087.65Show/hide
Query:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY
        MSHSVKIYDTCIGCTQCVRACPTDVLEMIPW GCKAKQI S PRT+DC G KRCES CPT FLSVR+YLWHETTRS+GLAY
Subjt:  MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACATTCAGTAAAGATTTATGATACATGTATAGGATGTACTCAATGTGTTCGAGCTTGCCCCACAGATGTATTAGAAATGATACCTTGGGGCGGATGTAAAGCTAA
ACAAATAGTTTCGACTCCACGAACGAAAGATTGTTTTGGTAGTAAGAGATGTGAATCTGACTGTCCGACAACTTTTTTGAGTGTTCGCATTTATTTATGGCATGAAACAA
CTCGAAGCATAGGTCTAGCTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACATTCAGTAAAGATTTATGATACATGTATAGGATGTACTCAATGTGTTCGAGCTTGCCCCACAGATGTATTAGAAATGATACCTTGGGGCGGATGTAAAGCTAA
ACAAATAGTTTCGACTCCACGAACGAAAGATTGTTTTGGTAGTAAGAGATGTGAATCTGACTGTCCGACAACTTTTTTGAGTGTTCGCATTTATTTATGGCATGAAACAA
CTCGAAGCATAGGTCTAGCTTATTGA
Protein sequenceShow/hide protein sequence
MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWGGCKAKQIVSTPRTKDCFGSKRCESDCPTTFLSVRIYLWHETTRSIGLAY