CuGenDBv2

Gene ID	IVF0024127
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	EAF domain-containing protein
Genome location	chr10:16506020..16514448
RNA-Seq Expression	IVF0024127
Synteny	IVF0024127
Gene Ontology terms	GO:0034243 - regulation of transcription elongation from RNA polymerase II promoter (biological process) GO:0045893 - positive regulation of transcription, DNA-templated (biological process) GO:0032783 - ELL-EAF complex (cellular component) GO:0003711 - transcription elongation regulator activity (molecular function)
InterPro domains	IPR019194 - Transcription elongation factor Eaf, N-terminal IPR027093 - EAF family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035866.1 ELL-associated factor 2 [Cucumis melo var. makuwa]

1.62e-185

85.59

Show/hide

Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF
        MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP
        RLERLHRA                                                 PRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP
Subjt:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP

Query:  VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
        VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
Subjt:  VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE

Query:  GRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
        GRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
Subjt:  GRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

XP_004148178.1 ELL-associated factor 2 [Cucumis sativus]

7.62e-211

94.71

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Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF
        MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSF+GSSEDYK+NDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP
        RLERLHRAVNQLRHLRQPGESAAA A   A  TTAGVAAPAA P++ASVLHSLTPPEPRLSPPVTKV+KPMHMGRSSFPTMPVEVERIDIGEPGNAGAK 
Subjt:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP

Query:  VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
         VASKGLT+YSSDPPN SVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVE GFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
Subjt:  VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE

Query:  GRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
        GRAEQSSSSSSSGSGSGSSSGSSSASSDSE SDEDSVTSI
Subjt:  GRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

XP_008454810.1 PREDICTED: ELL-associated factor 2 [Cucumis melo]

2.54e-226

100

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Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF
        MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP
        RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP
Subjt:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP

Query:  VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
        VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
Subjt:  VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE

Query:  GRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
        GRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
Subjt:  GRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

XP_022939831.1 ELL-associated factor 1 [Cucurbita moschata]

6.42e-175

77.93

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Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF
        MANN  EEPKTAPQPDRWY+LSLGPSF +ESSNKFCT RYEFKPASIDKTKPG LKKTKENRVT+EFQN+Q GKPN++F+GSSEDYK+NDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP
        RLERLHRAV QLRHLRQPGES+AAA  A ++T             SAS LHSLTPPEPRLSPP  KV KPMHMGR SFP++ VEVE+IDIGEPGN GAKP
Subjt:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP

Query:  VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
        VVASKG  DYSSDPPN S  SPG KNDDEHQDIDIDDIFGSVSSDD NNAEE++V+ GFDIN+PH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
Subjt:  VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE

Query:  GRA------------------EQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
        GR                   EQSSSSSSS SGSGSSSGSSS SSDSEG+DEDSVTSI
Subjt:  GRA------------------EQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

XP_038893321.1 ELL-associated factor 2-like [Benincasa hispida]

5.58e-193

85.56

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Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF
        MANN  EEPKTAPQPDRWYNLSLGPSFKDESSNKFCT RYEFKPASIDKTKPG LKKTKENRVTVEFQN+Q GKPN++F+GSSEDYK+NDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSS--ASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGA
        RLERLHRAV QLRHLRQPGESAAAAA A  TTT  GVAAPA T +S  AS LHSLTPPEPRLSPPV KVAKPMHMGR SFPTMPVEVERIDIGEPGN GA
Subjt:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSS--ASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGA

Query:  KPVVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVN
        K VVASKGL DYSSDPPN S SSPGLKNDDEHQDIDIDD+FGSV SDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVN
Subjt:  KPVVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVN

Query:  AEGRA------------------EQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
        AEGR                   +QSSSSSSSGSGSGSSSGSSS SSDSEGSDEDSVTSI
Subjt:  AEGRA------------------EQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KM56 EAF domain-containing protein

8.4e-164

94.71

Show/hide

Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF
        MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSF+GSSEDYK+NDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP
        RLERLHRAVNQLRHLRQPGESAAA A   A  TTAGVAAPAA P++ASVLHSLTPPEPRLSPPVTKV+KPMHMGRSSFPTMPVEVERIDIGEPGNAGAK 
Subjt:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP

Query:  VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
         VASKGLT+YSSDPPN SVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVE GFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
Subjt:  VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE

Query:  GRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
        GRAEQSSSSSSSGSGSGSSSGSSSASSDSE SDEDSVTSI
Subjt:  GRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

A0A1S3C0N3 ELL-associated factor 2

1.3e-175

100

Show/hide

Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF
        MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP
        RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP
Subjt:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP

Query:  VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
        VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
Subjt:  VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE

Query:  GRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
        GRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
Subjt:  GRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

A0A5A7T0X1 ELL-associated factor 2

1.5e-144

85.59

Show/hide

Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF
        MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP
        RLERLHRA                                                 PRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP
Subjt:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP

Query:  VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
        VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
Subjt:  VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE

Query:  GRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
        GRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
Subjt:  GRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

A0A6J1FGX9 ELL-associated factor 1

6.7e-137

77.93

Show/hide

Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF
        MANN  EEPKTAPQPDRWY+LSLGPSF +ESSNKFCT RYEFKPASIDKTKPG LKKTKENRVT+EFQN+Q GKPN++F+GSSEDYK+NDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP
        RLERLHRAV QLRHLRQPGES+AAA  A ++T             SAS LHSLTPPEPRLSPP  KV KPMHMGR SFP++ VEVE+IDIGEPGN GAKP
Subjt:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP

Query:  VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
        VVASKG  DYSSDPPN S  SPG KNDDEHQDIDIDDIFGSVSSDD NNAEE++V+ GFDIN+PH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
Subjt:  VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE

Query:  GRA------------------EQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
        GR                   EQSSSSSSS SGSGSSSGSSS SSDSEG+DEDSVTSI
Subjt:  GRA------------------EQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

A0A6J1JWD6 ELL-associated factor 1

9.7e-136

78.21

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Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF
        MANN  EEPKTAPQPDRWY+LSLGPSF +ESSNKFCT RYEFKPASIDKTKPG LKKTKENRVT+EFQN+Q GKPN++F+GSSEDYK+NDAVLFFDGETF
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP
        RLERLHRAV QLRHLRQPGES+A           AGVAA ++T  SAS LHSLTPPEPRLSPP  KV KPMHMGR SFP++ VEVE+IDIGEPGN GAK 
Subjt:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP

Query:  VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
        VVASKG  DYSSDPPN S  SPG KNDDEHQDIDIDDIFGSVSSDD NNAEE++V+ GFDIN+PH NDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE
Subjt:  VVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAE

Query:  GRA------------------EQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI
        GR                   EQSSSSSSS SGSGSSSGSSS SSDSEG+DEDSVTSI
Subjt:  GRA------------------EQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDSVTSI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G71080.1 RNA polymerase II transcription elongation factor

4.3e-67

50.96

Show/hide

Query:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF
        M+N+  +EP TAP+ D+WY+L LG S KD+SS+KFCT RYEFKPASIDK + G + K K+NRV+VEFQN+QPGKP ++F GSSEDYK++DAVLFFDGE F
Subjt:  MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETF

Query:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP
        RLERLHRAV QLRH+R PGESAAA+ +A                          P E RLS PV + AK   + RS  P +PVEVERI+IG+P N+ A+P
Subjt:  RLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKP

Query:  VVASKGLTDYSSDPPNASVSSP-GLKND--DEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQ--NDTDDEIADV-DDSGDEAEKGPNAAEALR
                   ++  N   +SP   KND  DEHQ+ID+ +IFGS + ++ +NAE+E  + G  +   ++  + T++EIADV DDSG E EKG NAAEALR
Subjt:  VVASKGLTDYSSDPPNASVSSP-GLKND--DEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQ--NDTDDEIADV-DDSGDEAEKGPNAAEALR

Query:  AQVNAEGRAEQSSSSS------------------SSGSGSGSSSGSSSASSDSEGS-DEDSVTSI
        AQVNAE +  Q+SSSS                  SSGSGSG  S S S+S  S GS DED V S+
Subjt:  AQVNAEGRAEQSSSSS------------------SSGSGSGSSSGSSSASSDSEGS-DEDSVTSI

AT5G38050.1 RNA polymerase II transcription elongation factor

1.6e-42

41.11

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Query:  NNIPEEPKTAPQPDRWYNLSLGPSFKDES---SNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDY--KDNDAVLFFDG
        +N  EEPK AP+P+RWYN++LGP+  + +   S KFCT RYEFKPASID TKPG L K+K+N+VT+EFQN+Q  KP + F G SEDY  +D DA+LFFDG
Subjt:  NNIPEEPKTAPQPDRWYNLSLGPSFKDES---SNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDY--KDNDAVLFFDG

Query:  ETFRLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAG
        E FRLE+LHR+V +L+ LR P ESA+A+   T                             ++ PPV K               PV++  IDI  P    
Subjt:  ETFRLERLHRAVNQLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAG

Query:  AKPVVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETG---FDINIPHQND-TDDEIADVDDSGDEAEKGPNAAEAL
                                      D  +D++I+D       ++      +  +TG    DIN+PH  +  DDEIA VD + DE+ KG NAAEAL
Subjt:  AKPVVASKGLTDYSSDPPNASVSSPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETG---FDINIPHQND-TDDEIADVDDSGDEAEKGPNAAEAL

Query:  RAQVNAEGRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDS
        RAQVNAE R E+S  SSSSGSG  S S  S   S   GS   S
Subjt:  RAQVNAEGRAEQSSSSSSSGSGSGSSSGSSSASSDSEGSDEDS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGAACAACATCCCAGAAGAACCGAAGACCGCGCCCCAGCCCGATCGGTGGTATAACCTATCCCTTGGTCCTTCATTCAAGGATGAATCGTCCAACAAATTTTGCAC
TTTTCGATATGAGTTTAAACCGGCTTCAATTGATAAAACGAAGCCGGGGTGGCTGAAAAAGACCAAGGAAAATAGGGTTACTGTTGAATTTCAAAACAGTCAACCTGGGA
AACCCAATTTGTCGTTTATTGGTAGTAGTGAGGATTATAAGGATAATGATGCCGTTTTGTTTTTTGATGGTGAGACGTTCCGGTTGGAGCGGCTGCACAGAGCGGTCAAT
CAGCTTCGGCACCTTCGACAGCCAGGCGAATCTGCTGCTGCCGCTGCCACTGCCACTGCCACTACCACTACCGCAGGCGTTGCTGCCCCTGCTGCCACTCCCAGCTCTGC
TTCTGTCCTTCATTCTTTGACACCGCCGGAGCCTCGGTTATCTCCTCCAGTCACTAAAGTTGCCAAACCTATGCATATGGGTCGAAGCAGTTTTCCTACCATGCCGGTAG
AGGTGGAGCGAATAGATATTGGAGAGCCAGGAAATGCAGGTGCAAAACCTGTTGTTGCTAGTAAAGGCCTTACTGATTACTCATCAGATCCACCAAATGCATCTGTTTCC
TCTCCAGGCCTGAAGAATGATGATGAGCATCAAGATATAGATATTGACGATATTTTCGGGTCTGTTTCATCTGATGATGGAAATAATGCTGAAGAAGAAAGAGTTGAGAC
TGGGTTCGATATAAATATACCACATCAGAACGATACGGATGATGAGATTGCTGATGTGGATGATAGTGGCGATGAAGCCGAGAAGGGACCTAACGCTGCAGAAGCCCTCA
GAGCTCAGGTTAATGCAGAAGGTAGGGCCGAGCAGAGCTCAAGTTCTAGTAGTAGCGGATCAGGCAGTGGCAGCAGCAGTGGAAGTAGTAGTGCCAGCAGTGATAGTGAA
GGTAGTGATGAGGATTCGGTTACCTCAATTTAA

mRNA sequence

Show/hide mRNA sequence

AAAAAGCTTAATGCTTTTCCGTCTGATTCTCTCCATCTACGACGGTTTTTCTCTCCCGCTCTCCTAATCGCAGCTCACCGCCGTTTGTTAGGCAAAATCCGCCCACAACA
TCAGTTCACAAGCCTCGTGTTCCCTCTATTTTGCCATTCGTCTGCGTTACCCACGACTCATTTGTACCTTCAATCGACTTACTCTTCGATCTCTCAATTCTCATCCAATT
TGGAATACTCTACACGAAGGGAATTCAGTTCTCTTCACGGTTTCAGCTTGAAAAGACTCGTTAGTTCCGGACCGTCCATTCAAGGTTTCAAGGCGACTCCATATCAGAAA
TTTTCTTCATAACTATTTGAATCAGTAATGGCGAACAACATCCCAGAAGAACCGAAGACCGCGCCCCAGCCCGATCGGTGGTATAACCTATCCCTTGGTCCTTCATTCAA
GGATGAATCGTCCAACAAATTTTGCACTTTTCGATATGAGTTTAAACCGGCTTCAATTGATAAAACGAAGCCGGGGTGGCTGAAAAAGACCAAGGAAAATAGGGTTACTG
TTGAATTTCAAAACAGTCAACCTGGGAAACCCAATTTGTCGTTTATTGGTAGTAGTGAGGATTATAAGGATAATGATGCCGTTTTGTTTTTTGATGGTGAGACGTTCCGG
TTGGAGCGGCTGCACAGAGCGGTCAATCAGCTTCGGCACCTTCGACAGCCAGGCGAATCTGCTGCTGCCGCTGCCACTGCCACTGCCACTACCACTACCGCAGGCGTTGC
TGCCCCTGCTGCCACTCCCAGCTCTGCTTCTGTCCTTCATTCTTTGACACCGCCGGAGCCTCGGTTATCTCCTCCAGTCACTAAAGTTGCCAAACCTATGCATATGGGTC
GAAGCAGTTTTCCTACCATGCCGGTAGAGGTGGAGCGAATAGATATTGGAGAGCCAGGAAATGCAGGTGCAAAACCTGTTGTTGCTAGTAAAGGCCTTACTGATTACTCA
TCAGATCCACCAAATGCATCTGTTTCCTCTCCAGGCCTGAAGAATGATGATGAGCATCAAGATATAGATATTGACGATATTTTCGGGTCTGTTTCATCTGATGATGGAAA
TAATGCTGAAGAAGAAAGAGTTGAGACTGGGTTCGATATAAATATACCACATCAGAACGATACGGATGATGAGATTGCTGATGTGGATGATAGTGGCGATGAAGCCGAGA
AGGGACCTAACGCTGCAGAAGCCCTCAGAGCTCAGGTTAATGCAGAAGGTAGGGCCGAGCAGAGCTCAAGTTCTAGTAGTAGCGGATCAGGCAGTGGCAGCAGCAGTGGA
AGTAGTAGTGCCAGCAGTGATAGTGAAGGTAGTGATGAGGATTCGGTTACCTCAATTTAATGGAAATGAAGCTGATGAAATCTTGAGCTTTGAGAAGCCATCTTCTGATG
TATGCAAAAATTGTTCTCACTAGATCACATTCATTTTTTTTTTCTCCTCTTTTCTAGTATAAGAATTGGCGTGATGGTAAATGAAATCTCCAAACATCACAAGAGGGAAA
TGTAAGTTAATTATCATTAAGTTCACCTGAACTTTGATGTCATTTAATGTTATGTAAAAATTCTTCAGAATAATTGAATTGTAACATAAATTTTAAAATGCAG

Protein sequence

Show/hide protein sequence

MANNIPEEPKTAPQPDRWYNLSLGPSFKDESSNKFCTFRYEFKPASIDKTKPGWLKKTKENRVTVEFQNSQPGKPNLSFIGSSEDYKDNDAVLFFDGETFRLERLHRAVN
QLRHLRQPGESAAAAATATATTTTAGVAAPAATPSSASVLHSLTPPEPRLSPPVTKVAKPMHMGRSSFPTMPVEVERIDIGEPGNAGAKPVVASKGLTDYSSDPPNASVS
SPGLKNDDEHQDIDIDDIFGSVSSDDGNNAEEERVETGFDINIPHQNDTDDEIADVDDSGDEAEKGPNAAEALRAQVNAEGRAEQSSSSSSSGSGSGSSSGSSSASSDSE
GSDEDSVTSI

IVF0024127 (gene) of Melon (IVF77) v1 genome