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IVF0024149 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024149
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr12:11439807..11440100
RNA-Seq ExpressionIVF0024149
SyntenyIVF0024149
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035440.1 uncharacterized protein E6C27_scaffold285G00630 [Cucumis melo var. makuwa]1.15e-64100Show/hide
Query:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIEWWFNPKP
        MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIEWWFNPKP
Subjt:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIEWWFNPKP
KAA0039167.1 uncharacterized protein E6C27_scaffold121G00700 [Cucumis melo var. makuwa]1.32e-5395.56Show/hide
Query:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIE
        MLF+GKCEIRWISESRV NEA+DSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFN+NRYQSSSITSDRTIEEEEKIE
Subjt:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIE
KAA0054315.1 uncharacterized protein E6C27_scaffold24G00360 [Cucumis melo var. makuwa]5.38e-5395.56Show/hide
Query:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIE
        MLF+GKCEIRWISESRV NEA+DSEKDEKDNDGRDRDVVYASSSMPSSPKNALI TRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIE
Subjt:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIE
KAA0056673.1 uncharacterized protein E6C27_scaffold288G002080 [Cucumis melo var. makuwa]5.42e-4493.59Show/hide
Query:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSIT
        MLF+GKCEIRWISES V NEA+DSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFN+NRYQSSSIT
Subjt:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSIT
KAA0061741.1 uncharacterized protein E6C27_scaffold212G001160 [Cucumis melo var. makuwa]1.32e-5395.56Show/hide
Query:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIE
        MLF+GKCEIRWIS+SRV NEA+DSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIE
Subjt:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIE
TrEMBL top hitse value%identityAlignment
A0A5A7SWM4 Uncharacterized protein1.1e-47100Show/hide
Query:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIEWWFNPKP
        MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIEWWFNPKP
Subjt:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIEWWFNPKP
A0A5A7UKV8 Uncharacterized protein7.0e-3995.56Show/hide
Query:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIE
        MLF+GKCEIRWISESRV NEA+DSEKDEKDNDGRDRDVVYASSSMPSSPKNALI TRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIE
Subjt:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIE
A0A5A7UL90 Uncharacterized protein2.2e-3293.59Show/hide
Query:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSIT
        MLF+GKCEIRWISES V NEA+DSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFN+NRYQSSSIT
Subjt:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSIT
A0A5A7V7N3 Uncharacterized protein2.4e-3995.56Show/hide
Query:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIE
        MLF+GKCEIRWIS+SRV NEA+DSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIE
Subjt:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIE
A0A5D3DUF5 Uncharacterized protein2.4e-3995.56Show/hide
Query:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIE
        MLF+GKCEIRWISESRV NEA+DSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFN+NRYQSSSITSDRTIEEEEKIE
Subjt:  MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTTCCAAGGAAAATGTGAAATTAGATGGATCTCTGAATCTCGTGTCGAAAATGAAGCGAAAGATTCAGAGAAAGATGAAAAGGACAACGACGGAAGAGATAGAGA
TGTGGTTTATGCGTCGTCTTCCATGCCATCGTCGCCAAAAAATGCTCTCATTCCGACAAGGTGTAGATTTACACCAAATCATTCGTCCTTTAACGATAACCGGTATCAGA
GTTCTTCGATTACAAGTGACAGAACTATCGAAGAAGAAGAGAAAATAGAGTGGTGGTTCAACCCTAAACCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTTCCAAGGAAAATGTGAAATTAGATGGATCTCTGAATCTCGTGTCGAAAATGAAGCGAAAGATTCAGAGAAAGATGAAAAGGACAACGACGGAAGAGATAGAGA
TGTGGTTTATGCGTCGTCTTCCATGCCATCGTCGCCAAAAAATGCTCTCATTCCGACAAGGTGTAGATTTACACCAAATCATTCGTCCTTTAACGATAACCGGTATCAGA
GTTCTTCGATTACAAGTGACAGAACTATCGAAGAAGAAGAGAAAATAGAGTGGTGGTTCAACCCTAAACCCTAA
Protein sequenceShow/hide protein sequence
MLFQGKCEIRWISESRVENEAKDSEKDEKDNDGRDRDVVYASSSMPSSPKNALIPTRCRFTPNHSSFNDNRYQSSSITSDRTIEEEEKIEWWFNPKP