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IVF0024157 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024157
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein, putative, Ty3-gypsy subclass
Genome locationchr11:14576946..14577152
RNA-Seq ExpressionIVF0024157
SyntenyIVF0024157
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025418.1 uncharacterized protein E6C27_scaffold417G00010 [Cucumis melo var. makuwa]1.70e-0748.39Show/hide
Query:  MANEKKKKVVKEDPCAQTPSRMQGGEHHNENRRYALGVQQRRNFKTRSYVPFGSKMSHGRKF
        M N+ K KV +E  C Q+ + ++GGE   ENR +A GVQ++RNFKT S+   GSK ++G KF
Subjt:  MANEKKKKVVKEDPCAQTPSRMQGGEHHNENRRYALGVQQRRNFKTRSYVPFGSKMSHGRKF

KAA0038928.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]2.47e-0745.76Show/hide
Query:  MANEKKKKVVKEDPCAQTPSRMQGGEHHNENRRYALGVQQRRNFKTRSYVPFGSKMSHG
        MAN+KK K+ K+DP  Q+ + ++G E H E  R  L +QQ+ NFKT S+ P G + S+G
Subjt:  MANEKKKKVVKEDPCAQTPSRMQGGEHHNENRRYALGVQQRRNFKTRSYVPFGSKMSHG

TYK14641.1 hypothetical protein E5676_scaffold1275G00380 [Cucumis melo var. makuwa]7.50e-40100Show/hide
Query:  MANEKKKKVVKEDPCAQTPSRMQGGEHHNENRRYALGVQQRRNFKTRSYVPFGSKMSHGRKFSTGQGR
        MANEKKKKVVKEDPCAQTPSRMQGGEHHNENRRYALGVQQRRNFKTRSYVPFGSKMSHGRKFSTGQGR
Subjt:  MANEKKKKVVKEDPCAQTPSRMQGGEHHNENRRYALGVQQRRNFKTRSYVPFGSKMSHGRKFSTGQGR

TYK21986.1 RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]4.36e-0447.06Show/hide
Query:  MANEKKKKVVKEDPCAQTPSRMQGGEHHNENRRYALGVQQRRNFKTRSYVP
        MA+EKK K+VKE PC Q+ S M+G E  NENRR+    + R+   T    P
Subjt:  MANEKKKKVVKEDPCAQTPSRMQGGEHHNENRRYALGVQQRRNFKTRSYVP

TrEMBL top hitse value%identityAlignment
A0A5A7SH04 Uncharacterized protein4.7e-0548.39Show/hide
Query:  MANEKKKKVVKEDPCAQTPSRMQGGEHHNENRRYALGVQQRRNFKTRSYVPFGSKMSHGRKF
        M N+ K KV +E  C Q+ + ++GGE   ENR +A GVQ++RNFKT S+   GSK ++G KF
Subjt:  MANEKKKKVVKEDPCAQTPSRMQGGEHHNENRRYALGVQQRRNFKTRSYVPFGSKMSHGRKF

A0A5A7T7S7 Retrotransposon protein, putative, Ty3-gypsy subclass6.1e-0545.76Show/hide
Query:  MANEKKKKVVKEDPCAQTPSRMQGGEHHNENRRYALGVQQRRNFKTRSYVPFGSKMSHG
        MAN+KK K+ K+DP  Q+ + ++G E H E  R  L +QQ+ NFKT S+ P G + S+G
Subjt:  MANEKKKKVVKEDPCAQTPSRMQGGEHHNENRRYALGVQQRRNFKTRSYVPFGSKMSHG

A0A5D3CS54 Uncharacterized protein4.2e-30100Show/hide
Query:  MANEKKKKVVKEDPCAQTPSRMQGGEHHNENRRYALGVQQRRNFKTRSYVPFGSKMSHGRKFSTGQGR
        MANEKKKKVVKEDPCAQTPSRMQGGEHHNENRRYALGVQQRRNFKTRSYVPFGSKMSHGRKFSTGQGR
Subjt:  MANEKKKKVVKEDPCAQTPSRMQGGEHHNENRRYALGVQQRRNFKTRSYVPFGSKMSHGRKFSTGQGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAATGAAAAGAAGAAGAAGGTTGTGAAGGAAGACCCATGCGCTCAAACTCCTAGTAGAATGCAAGGTGGTGAACATCACAACGAGAATAGGCGTTATGCGCTAGG
CGTTCAGCAGCGAAGAAATTTCAAAACTCGTTCTTATGTTCCATTTGGATCCAAAATGAGTCATGGTCGAAAATTTTCGACTGGTCAAGGAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAATGAAAAGAAGAAGAAGGTTGTGAAGGAAGACCCATGCGCTCAAACTCCTAGTAGAATGCAAGGTGGTGAACATCACAACGAGAATAGGCGTTATGCGCTAGG
CGTTCAGCAGCGAAGAAATTTCAAAACTCGTTCTTATGTTCCATTTGGATCCAAAATGAGTCATGGTCGAAAATTTTCGACTGGTCAAGGAAGATGA
Protein sequenceShow/hide protein sequence
MANEKKKKVVKEDPCAQTPSRMQGGEHHNENRRYALGVQQRRNFKTRSYVPFGSKMSHGRKFSTGQGR