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IVF0024166 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024166
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPhotosystem II reaction center protein Z
Genome locationchr02:20096230..20096418
RNA-Seq ExpressionIVF0024166
SyntenyIVF0024166
Gene Ontology termsGO:0042549 - photosystem II stabilization (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009539 - photosystem II reaction center (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR002644 - Photosystem II PsbZ, reaction centre
IPR036512 - Photosystem II PsbZ superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
YP_009004041.1 photosystem II protein Z [Cucumis hystrix]3.02e-2287.1Show/hide
Query:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLA+FALIVTSSILLISVP+VFASP+G SGNKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
YP_009236277.1 photosystem II protein Z [Gynostemma pentaphyllum]1.49e-2290.32Show/hide
Query:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLAIFALIVTSSILLISVPIVFASP+G SGNKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
YP_009430624.1 photosystem II protein z [Gynostemma cardiospermum]2.12e-2288.71Show/hide
Query:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLA+FALIVTSSILLISVPIVFASP+G SGNKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
YP_009751987.1 photosystem II subunit Z [Cionosicys macranthus]4.29e-2285.48Show/hide
Query:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLA+FALIVTSSILLISVP+VFASP+G SGNKN+V S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
YP_010144251.1 photosystem II reaction center Z protein [Poikilospermum lanceolatum]4.29e-2285.48Show/hide
Query:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLA+FALIVTSSILLISVP+VFASP+G SGNKNVV S T L IGLVFL+GILNSLIS
Subjt:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
TrEMBL top hitse value%identityAlignment
A0A109WWQ2 Photosystem II reaction center protein Z7.0e-1690.32Show/hide
Query:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLAIFALIVTSSILLISVPIVFASP+G SGNKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
A0A291IBB6 Photosystem II reaction center protein Z7.0e-1690.32Show/hide
Query:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLAIFALIVTSSILLISVPIVFASP+G SGNKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
A0A291IBE9 Photosystem II reaction center protein Z7.0e-1690.32Show/hide
Query:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLAIFALIVTSSILLISVPIVFASP+G SGNKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
A0A291IBR9 Photosystem II reaction center protein Z7.0e-1690.32Show/hide
Query:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLAIFALIVTSSILLISVPIVFASP+G SGNKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
A0A2L0WR82 Photosystem II reaction center protein Z9.1e-1688.71Show/hide
Query:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLA+FALIVTSSILLISVPIVFASP+G SGNKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
SwissProt top hitse value%identityAlignment
P56790 Photosystem II reaction center protein Z2.1e-1783.87Show/hide
Query:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLA+FALI+TSSILLISVP+VFASP+G S NKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
Q09MI1 Photosystem II reaction center protein Z4.7e-1783.87Show/hide
Query:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLA+FALI TSSILLISVP+VFASP+G S NKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
Q32902 Photosystem II reaction center protein Z1.6e-1785.48Show/hide
Query:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLA+FALIVTSSILLISVP+VFASP+G S NKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
Q4VZN6 Photosystem II reaction center protein Z3.2e-1887.1Show/hide
Query:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLA+FALIVTSSILLISVP+VFASP+G SGNKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
Q5QA82 Photosystem II reaction center protein Z3.6e-1785.48Show/hide
Query:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLAIFALI TSSILLISVP+VFASP+G S NKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
Arabidopsis top hitse value%identityAlignment
ATCG00300.1 YCF91.5e-1883.87Show/hide
Query:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS
        MTIAFQLA+FALI+TSSILLISVP+VFASP+G S NKNVV S T L IGLVFLVGILNSLIS
Subjt:  MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTATTGCTTTCCAATTGGCTATTTTTGCATTAATTGTTACTTCATCAATCTTACTGATTAGTGTGCCCATTGTATTTGCTTCTCCTAATGGTGGGTCGGGTAACAA
AAATGTTGTAGTTTCCAGTACATTATTACGGATTGGATTAGTCTTTCTTGTAGGTATCCTTAATTCTCTTATCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTATTGCTTTCCAATTGGCTATTTTTGCATTAATTGTTACTTCATCAATCTTACTGATTAGTGTGCCCATTGTATTTGCTTCTCCTAATGGTGGGTCGGGTAACAA
AAATGTTGTAGTTTCCAGTACATTATTACGGATTGGATTAGTCTTTCTTGTAGGTATCCTTAATTCTCTTATCTCTTAA
Protein sequenceShow/hide protein sequence
MTIAFQLAIFALIVTSSILLISVPIVFASPNGGSGNKNVVVSSTLLRIGLVFLVGILNSLIS