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IVF0024170 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024170
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNBS-LRR type resistance protein
Genome locationchr11:18806020..18806256
RNA-Seq ExpressionIVF0024170
SyntenyIVF0024170
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035524.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]9.09e-2264.1Show/hide
Query:  MEIHLHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIGQSLSIFEAHASRTSTHTPSMLPDKIS
        +E+HL KRKRA+LEDF   SQEN SENA + VFSSWGKK SP+GFFPL RIG      E H  +TST TP MLPD  S
Subjt:  MEIHLHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIGQSLSIFEAHASRTSTHTPSMLPDKIS

KAA0040927.1 hypothetical protein E6C27_scaffold125G00720 [Cucumis melo var. makuwa]8.25e-1973.68Show/hide
Query:  MEIHLHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIGQSLSI
        +E+ L +RKRA+LEDFQCSS EN SENA DSV+SSWGKKRSP+GFFPLLRIG   S+
Subjt:  MEIHLHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIGQSLSI

KAA0057641.1 hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa]3.18e-1469.23Show/hide
Query:  MEIHLHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIG
        +E++L +RK+ +L+DF CSSQEN S+NA DS FSSWGKKRSP GFF LLRIG
Subjt:  MEIHLHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIG

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.55e-1375Show/hide
Query:  LHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIG
        + +R RA L+DF+CSSQEN SEN SDSVFSSW KK +PDGFFPLLRIG
Subjt:  LHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIG

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]6.53e-2082.69Show/hide
Query:  MEIHLHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIG
        +E+HL +RKR +LEDF+CSSQENVSENA DS FSSWGKKRSPDGFFPLLRIG
Subjt:  MEIHLHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIG

TrEMBL top hitse value%identityAlignment
A0A5A7UVV0 Uncharacterized protein2.9e-1169.23Show/hide
Query:  MEIHLHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIG
        +E++L +RK+ +L+DF CSSQEN S+NA DS FSSWGKKRSP GFF LLRIG
Subjt:  MEIHLHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIG

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein6.5e-1154.55Show/hide
Query:  LHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIGQSLSIFEAHASRT----STHTPSMLPDKI
        + +R RA L+DF+CSSQEN SEN SDSVFSSW KK +PDGFFPLLRIG          S      S H P M    I
Subjt:  LHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIGQSLSIFEAHASRT----STHTPSMLPDKI

A0A5D3CGX3 Uncharacterized protein5.7e-1573.68Show/hide
Query:  MEIHLHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIGQSLSI
        +E+ L +RKRA+LEDFQCSS EN SENA DSV+SSWGKKRSP+GFFPLLRIG   S+
Subjt:  MEIHLHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIGQSLSI

A0A5D3DFP2 Uncharacterized protein3.9e-1682.69Show/hide
Query:  MEIHLHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIG
        +E+HL +RKR +LEDF+CSSQENVSENA DS FSSWGKKRSPDGFFPLLRIG
Subjt:  MEIHLHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIG

A0A5D3E5W4 NBS-LRR type resistance protein1.6e-1764.1Show/hide
Query:  MEIHLHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIGQSLSIFEAHASRTSTHTPSMLPDKIS
        +E+HL KRKRA+LEDF   SQEN SENA + VFSSWGKK SP+GFFPL RIG      E H  +TST TP MLPD  S
Subjt:  MEIHLHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIGQSLSIFEAHASRTSTHTPSMLPDKIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATTCACTTGCACAAAAGGAAACGAGCCAAGCTTGAGGACTTCCAGTGTTCGTCACAAGAAAACGTGAGCGAGAATGCCTCGGACTCAGTTTTCTCCTCATGGGG
AAAAAAGCGATCCCCCGACGGTTTCTTCCCTTTGCTTCGTATTGGTCAAAGTCTTTCGATCTTCGAGGCTCATGCTTCGAGGACTTCAACCCACACTCCTAGCATGCTCC
CTGATAAAATTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATTCACTTGCACAAAAGGAAACGAGCCAAGCTTGAGGACTTCCAGTGTTCGTCACAAGAAAACGTGAGCGAGAATGCCTCGGACTCAGTTTTCTCCTCATGGGG
AAAAAAGCGATCCCCCGACGGTTTCTTCCCTTTGCTTCGTATTGGTCAAAGTCTTTCGATCTTCGAGGCTCATGCTTCGAGGACTTCAACCCACACTCCTAGCATGCTCC
CTGATAAAATTTCTTGA
Protein sequenceShow/hide protein sequence
MEIHLHKRKRAKLEDFQCSSQENVSENASDSVFSSWGKKRSPDGFFPLLRIGQSLSIFEAHASRTSTHTPSMLPDKIS