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IVF0024180 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024180
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRAB6-interacting golgin
Genome locationchr10:761311..762895
RNA-Seq ExpressionIVF0024180
SyntenyIVF0024180
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034665.1 uncharacterized protein E6C27_scaffold65G006840 [Cucumis melo var. makuwa]6.26e-9497.52Show/hide
Query:  MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
        KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLME    SEKWRMKKLEELNKNIESTN
Subjt:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

XP_004150485.1 uncharacterized protein LOC101217540 [Cucumis sativus]5.27e-9698.14Show/hide
Query:  MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGN DRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVE QLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
        KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIES N
Subjt:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

XP_008446775.1 PREDICTED: uncharacterized protein LOC103489402 [Cucumis melo]4.71e-99100Show/hide
Query:  MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
        KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
Subjt:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

XP_022150510.1 uncharacterized protein LOC111018644 [Momordica charantia]1.77e-7883.75Show/hide
Query:  MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTS +GG  NG+R  +EGS+D+ EDE VSKLTVSTLQAREEEI+RKKMEV+EKVE QL+RAEEEAKRLAQIWEEL+VM DPM KEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIEST
        KSLGQICQKKEKEYKE  +IFNEKSNEKAQLLA LMELLGQSE+WRM+KLEEL+KNIEST
Subjt:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIEST

XP_038892385.1 uncharacterized protein LOC120081508 [Benincasa hispida]4.81e-8389.44Show/hide
Query:  MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNG GGN          DRNEDE +SKLT+STLQAREEEIE+KKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPM KEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
        KSLGQICQKKEKE KEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
Subjt:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

TrEMBL top hitse value%identityAlignment
A0A0A0KTG1 RAB6-interacting golgin1.0e-7498.14Show/hide
Query:  MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGN DRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVE QLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
        KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIES N
Subjt:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

A0A1S3BFW5 RAB6-interacting golgin4.8e-77100Show/hide
Query:  MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
        KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
Subjt:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

A0A5D3CFS0 RAB6-interacting golgin4.2e-7397.52Show/hide
Query:  MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
        KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLME    SEKWRMKKLEELNKNIESTN
Subjt:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

A0A6J1D8N9 RAB6-interacting golgin2.2e-6183.23Show/hide
Query:  MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL
        MTS +GG  NG+R  +EGS+D+ EDE VSKLTVSTLQAREEEI+RKKMEV+EKVE QL+RAEEEAKRLAQIWEEL+VM DPM KEVGNVRKRIDTVKREL
Subjt:  MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKREL

Query:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
        KSLGQICQKKEKEYKE  +IFNEKSNEKAQLLA LMELLGQSE+WRM+KLEEL+KNIEST+
Subjt:  KSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

A0A6J1HV92 RAB6-interacting golgin3.5e-5981.48Show/hide
Query:  MTSKNGGGGNGDRVLLEGSNDRNED-ETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRE
        MTSK+G  GNG+R++ EGS  R+ED E   +LTVSTLQAREEEIER+KMEVKEKVE QL+RAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDT K+E
Subjt:  MTSKNGGGGNGDRVLLEGSNDRNED-ETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRE

Query:  LKSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN
        LKSLGQICQKKEKEYKEV +IFNEK+NEKAQLL TLMELL QSE+WRM KLEELNK+I  TN
Subjt:  LKSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36410.2 Family of unknown function (DUF662)1.7e-3456.74Show/hide
Query:  SNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQ
        S+   EDE +++  +S  +A+E+EIE+++MEV+E+++ QL R E+E KRL+ I EELE M DPM KEV  VRK+ID+V +ELK LG   QKKE+EYKE  
Subjt:  SNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQ

Query:  DIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIES
        D FNEK+ EK QL+  LMEL+G+SEK RM KLEEL+K+IE+
Subjt:  DIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIES

AT3G09980.1 Family of unknown function (DUF662)1.3e-3762.5Show/hide
Query:  EDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQDIFNE
        EDE +S+  +S  +A+EEEIE+KKME++E+V+ QL R EEE KRLA I EELE + DPM KEV  VRK+ID+V +ELK LG   QKKE+EYKE  + FNE
Subjt:  EDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQDIFNE

Query:  KSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIES
        K+ EK QL+  LMEL+G+SEK RMKKLEEL+KNI+S
Subjt:  KSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIES

AT3G52900.1 Family of unknown function (DUF662)1.2e-3555.62Show/hide
Query:  MTSKNGGGG---NGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVK
        M+SKN  G    +G     +   + NE+E + K+ V+  QAREEEIERKKM VKEKV+ +L  AEE  + L Q  EELE+MGDPM KEVG VRK+ID   
Subjt:  MTSKNGGGG---NGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVK

Query:  RELKSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNI
        R++KSL Q CQKKEKEYK+  + FNEK+ EKA L++ LMELL +SE+ R+KKLEE+NK +
Subjt:  RELKSLGQICQKKEKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNI

AT3G52920.1 Family of unknown function (DUF662)1.5e-3356.83Show/hide
Query:  EDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQDIFNE
        EDE +++  +S  +A+E+EIE++KMEV+E+V+ QL R EEE +RLA I EELE M DPM KEV  VRK+ID+V +ELK LG   QKKE+EYKE  D FNE
Subjt:  EDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQDIFNE

Query:  KSNEKAQLLATLME---LLGQSEKWRMKKLEELNKNIES
        K+ EK QL+  LME   L+G+SEK R+KKL+EL+++I++
Subjt:  KSNEKAQLLATLME---LLGQSEKWRMKKLEELNKNIES

AT3G52920.2 Family of unknown function (DUF662)3.5e-3558.09Show/hide
Query:  EDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQDIFNE
        EDE +++  +S  +A+E+EIE++KMEV+E+V+ QL R EEE +RLA I EELE M DPM KEV  VRK+ID+V +ELK LG   QKKE+EYKE  D FNE
Subjt:  EDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKKEKEYKEVQDIFNE

Query:  KSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIES
        K+ EK QL+  LMEL+G+SEK R+KKL+EL+++I++
Subjt:  KSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGTAAGAACGGAGGGGGAGGGAACGGGGATAGAGTTCTATTGGAAGGAAGTAATGATCGGAATGAAGACGAGACGGTGTCTAAGCTCACCGTATCTACATTGCA
AGCTAGAGAAGAGGAGATTGAGAGGAAGAAAATGGAAGTAAAAGAGAAGGTTGAATTTCAGTTAACCCGGGCAGAGGAAGAAGCCAAACGCTTGGCACAAATTTGGGAAG
AGCTGGAGGTAATGGGAGATCCAATGGGGAAGGAAGTTGGTAATGTGCGAAAAAGAATTGACACAGTCAAAAGAGAACTAAAATCTCTGGGACAGATCTGCCAAAAGAAG
GAAAAAGAATATAAGGAAGTCCAGGATATATTCAACGAAAAAAGCAACGAGAAAGCTCAGCTGCTCGCTACACTAATGGAGCTGTTGGGGCAGAGTGAGAAATGGAGGAT
GAAAAAGCTCGAGGAGTTGAACAAGAATATAGAATCAACGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAGTAAGAACGGAGGGGGAGGGAACGGGGATAGAGTTCTATTGGAAGGAAGTAATGATCGGAATGAAGACGAGACGGTGTCTAAGCTCACCGTATCTACATTGCA
AGCTAGAGAAGAGGAGATTGAGAGGAAGAAAATGGAAGTAAAAGAGAAGGTTGAATTTCAGTTAACCCGGGCAGAGGAAGAAGCCAAACGCTTGGCACAAATTTGGGAAG
AGCTGGAGGTAATGGGAGATCCAATGGGGAAGGAAGTTGGTAATGTGCGAAAAAGAATTGACACAGTCAAAAGAGAACTAAAATCTCTGGGACAGATCTGCCAAAAGAAG
GAAAAAGAATATAAGGAAGTCCAGGATATATTCAACGAAAAAAGCAACGAGAAAGCTCAGCTGCTCGCTACACTAATGGAGCTGTTGGGGCAGAGTGAGAAATGGAGGAT
GAAAAAGCTCGAGGAGTTGAACAAGAATATAGAATCAACGAACTGA
Protein sequenceShow/hide protein sequence
MTSKNGGGGNGDRVLLEGSNDRNEDETVSKLTVSTLQAREEEIERKKMEVKEKVEFQLTRAEEEAKRLAQIWEELEVMGDPMGKEVGNVRKRIDTVKRELKSLGQICQKK
EKEYKEVQDIFNEKSNEKAQLLATLMELLGQSEKWRMKKLEELNKNIESTN