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IVF0024189 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024189
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPol polyprotein
Genome locationchr03:10987166..10987519
RNA-Seq ExpressionIVF0024189
SyntenyIVF0024189
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036534.1 uncharacterized protein E6C27_scaffold191G00350 [Cucumis melo var. makuwa]9.02e-5067.26Show/hide
Query:  IQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEFWDAL
        IQ ++M+FDLNRLFCFEGA FKR+KQ+MLFFLTLK++ TAC +++  V  K+P +E+++N ATW E++FICKNLI+NGL NELYDYY+TM+T KE WDAL
Subjt:  IQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEFWDAL

Query:  QKKYDIEEAGSKK
        QKKYD EE G KK
Subjt:  QKKYDIEEAGSKK

KAA0048414.1 uncharacterized protein E6C27_scaffold264G001400 [Cucumis melo var. makuwa]5.65e-4868.38Show/hide
Query:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF
        M+G IQ ++M+ DLNR F FEGA FKR+KQ+MLFFLTLKK+ATAC T++  V  K+PT+E+++N ATW E++FICKNLI+NGL NELYDYY+TM+T KE 
Subjt:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF

Query:  WDALQKKYDIEEAGSKK
        WDALQKKYD EEA SKK
Subjt:  WDALQKKYDIEEAGSKK

KAA0058200.1 uncharacterized protein E6C27_scaffold274G005210 [Cucumis melo var. makuwa]1.37e-5068.38Show/hide
Query:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF
        M+G IQ ++M+FDLNR F FEGA FKR+KQ+MLFFLTLKK+ATAC T++P V  K+PT+++++N ATW E++FICKNLI+NGL +ELYDYY+TM+T KE 
Subjt:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF

Query:  WDALQKKYDIEEAGSKK
        WDALQKKYD EEA SKK
Subjt:  WDALQKKYDIEEAGSKK

KAA0060458.1 uncharacterized protein E6C27_scaffold22G002860 [Cucumis melo var. makuwa]3.02e-5169.23Show/hide
Query:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF
        M+G IQ ++M+ DLNRLF FEGA FKR+KQ++LFFLTLKK+ATAC T++P V  K+PT+E+++N ATW E++FICKNLI+NGL +ELYDYY+TM+T KE 
Subjt:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF

Query:  WDALQKKYDIEEAGSKK
        WDALQKKYD EEAGSKK
Subjt:  WDALQKKYDIEEAGSKK

TYK09792.1 uncharacterized protein E5676_scaffold127G00840 [Cucumis melo var. makuwa]4.32e-4967.52Show/hide
Query:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF
        M+ I QG+MMA DLNR   FEGA FK +KQ+M FFL L+K+AT CIT E   PV+NPT+EEI NH TWI+S+FICKNLI+NGL +ELYDY  TMS  KE 
Subjt:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF

Query:  WDALQKKYDIEEAGSKK
        WDALQKKYD E+ GSKK
Subjt:  WDALQKKYDIEEAGSKK

TrEMBL top hitse value%identityAlignment
A0A5A7SZ30 Uncharacterized protein2.1e-3767.26Show/hide
Query:  IQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEFWDAL
        IQ ++M+FDLNRLFCFEGA FKR+KQ+MLFFLTLK++ TAC +++  V  K+P +E+++N ATW E++FICKNLI+NGL NELYDYY+TM+T KE WDAL
Subjt:  IQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEFWDAL

Query:  QKKYDIEEAGSKK
        QKKYD EE G KK
Subjt:  QKKYDIEEAGSKK

A0A5A7USR3 Uncharacterized protein2.5e-3868.38Show/hide
Query:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF
        M+G IQ ++M+FDLNR F FEGA FKR+KQ+MLFFLTLKK+ATAC T++P V  K+PT+++++N ATW E++FICKNLI+NGL +ELYDYY+TM+T KE 
Subjt:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF

Query:  WDALQKKYDIEEAGSKK
        WDALQKKYD EEA SKK
Subjt:  WDALQKKYDIEEAGSKK

A0A5A7UYY4 Uncharacterized protein1.7e-3969.23Show/hide
Query:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF
        M+G IQ ++M+ DLNRLF FEGA FKR+KQ++LFFLTLKK+ATAC T++P V  K+PT+E+++N ATW E++FICKNLI+NGL +ELYDYY+TM+T KE 
Subjt:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF

Query:  WDALQKKYDIEEAGSKK
        WDALQKKYD EEAGSKK
Subjt:  WDALQKKYDIEEAGSKK

A0A5D3BEH3 Uncharacterized protein1.6e-3768.38Show/hide
Query:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF
        M+G IQ ++M+ DLNR F FEGA FKR+KQ+MLFFLTLKK+ATAC T++  V  K+PT+E+++N ATW E++FICKNLI+NGL NELYDYY+TM+T KE 
Subjt:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF

Query:  WDALQKKYDIEEAGSKK
        WDALQKKYD EEA SKK
Subjt:  WDALQKKYDIEEAGSKK

A0A5D3CES3 Uncharacterized protein6.1e-3767.52Show/hide
Query:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF
        M+ I QG+MMA DLNR   FEGA FK +KQ+M FFL L+K+AT CIT E   PV+NPT+EEI NH TWI+S+FICKNLI+NGL +ELYDY  TMS  KE 
Subjt:  MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEF

Query:  WDALQKKYDIEEAGSKK
        WDALQKKYD E+ GSKK
Subjt:  WDALQKKYDIEEAGSKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G00980.1 zinc knuckle (CCHC-type) family protein3.9e-0427.35Show/hide
Query:  FDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIV-------PVKNPTKEEIQNHAT---WIESNFICKNLIMNGLINELYDYYT-TMSTVKEF
        F + ++  F+G  +  +  +M  F  LK++    +  EP         P  NP +E  +  AT   W+  +++C   +MN L + LY  Y+      KE 
Subjt:  FDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIV-------PVKNPTKEEIQNHAT---WIESNFICKNLIMNGLINELYDYYT-TMSTVKEF

Query:  WDALQKKYDIEEAGSKK
        WD L+  Y  +E+ SK+
Subjt:  WDALQKKYDIEEAGSKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGTATAATTCAAGGCAACATGATGGCCTTTGATCTCAACCGACTATTTTGCTTCGAAGGAGCATGTTTCAAACGTTTCAAACAAGAAATGTTGTTCTTTCTAAC
CTTGAAAAAGATCGCCACTGCTTGCATTACTAAAGAACCGATAGTTCCAGTAAAAAATCCAACTAAGGAGGAGATCCAAAACCATGCTACATGGATAGAATCAAACTTTA
TATGTAAGAATCTAATTATGAATGGACTTATTAATGAGCTTTATGATTATTACACTACTATGTCCACCGTGAAAGAATTCTGGGATGCATTGCAAAAGAAGTATGACATC
GAAGAGGCCGGATCCAAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGGTATAATTCAAGGCAACATGATGGCCTTTGATCTCAACCGACTATTTTGCTTCGAAGGAGCATGTTTCAAACGTTTCAAACAAGAAATGTTGTTCTTTCTAAC
CTTGAAAAAGATCGCCACTGCTTGCATTACTAAAGAACCGATAGTTCCAGTAAAAAATCCAACTAAGGAGGAGATCCAAAACCATGCTACATGGATAGAATCAAACTTTA
TATGTAAGAATCTAATTATGAATGGACTTATTAATGAGCTTTATGATTATTACACTACTATGTCCACCGTGAAAGAATTCTGGGATGCATTGCAAAAGAAGTATGACATC
GAAGAGGCCGGATCCAAGAAGTAA
Protein sequenceShow/hide protein sequence
MSGIIQGNMMAFDLNRLFCFEGACFKRFKQEMLFFLTLKKIATACITKEPIVPVKNPTKEEIQNHATWIESNFICKNLIMNGLINELYDYYTTMSTVKEFWDALQKKYDI
EEAGSKK