; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0024213 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024213
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTHO complex subunit 4A-like
Genome locationchr11:18669366..18672663
RNA-Seq ExpressionIVF0024213
SyntenyIVF0024213
Gene Ontology termsGO:0006406 - mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR025715 - Chromatin target of PRMT1 protein, C-terminal
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061942.1 THO complex subunit 4A-like isoform X1 [Cucumis melo var. makuwa]8.01e-14899.54Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED
        MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED

Query:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG
        IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG
Subjt:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG

Query:  RGFGRGRGRGRGPSEKV
        RGFGRGRGRGRGPSEK+
Subjt:  RGFGRGRGRGRGPSEKV

XP_004143092.1 THO complex subunit 4A [Cucumis sativus]2.45e-16198.31Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED
        MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAA+RTPYSAPKAPETTWQHDMFADPSSGF+ QGGRASAIQTGTKLYISNLDYGVSNED
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED

Query:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG
        IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG
Subjt:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG

Query:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
         GFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

XP_008448384.1 PREDICTED: THO complex subunit 4A-like isoform X1 [Cucumis melo]3.11e-164100Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED
        MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED

Query:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG
        IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG
Subjt:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG

Query:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
        RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

XP_022947495.1 THO complex subunit 4A-like [Cucurbita moschata]8.57e-14491.18Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED
        MAAPLDMSLDDIIKNNKKSRSG SRGRGRGSGPGPVRR PNRAA+RTPYSAPKAPETTWQHDMF D  +GF  Q GRAS+IQTGTKLYISNLDYGVSNED
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED

Query:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG
        IKELFSEVGDMKR+GIHYDKSGRSKGTAEVVFSRR DA AAVKKYNNVQLDGKPMKIEIVGTNI+T AVGP AAVNPFEN NGAPRRQQGRGG PSRQRG
Subjt:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG

Query:  -RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
         RG GRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  -RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

XP_038901991.1 THO complex subunit 4A-like [Benincasa hispida]1.42e-16097.89Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED
        MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAA+RTPYSAPKAPETTWQHDMFADP SGF GQGGRASAIQTGTKLYISNLDYGVSNED
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED

Query:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG
        IKELFSEVGDMKR+GIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFEN NGAPRRQQGRGGPPSRQRG
Subjt:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG

Query:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
        RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

TrEMBL top hitse value%identityAlignment
A0A0A0KBU2 RRM domain-containing protein7.0e-12598.31Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED
        MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAA+RTPYSAPKAPETTWQHDMFADPSSGF+ QGGRASAIQTGTKLYISNLDYGVSNED
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED

Query:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG
        IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG
Subjt:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG

Query:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
         GFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

A0A1S3BK70 THO complex subunit 4A-like isoform X14.4e-127100Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED
        MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED

Query:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG
        IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG
Subjt:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG

Query:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
        RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

A0A5A7V158 THO complex subunit 4A-like isoform X13.9e-11599.54Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED
        MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED

Query:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG
        IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG
Subjt:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRG

Query:  RGFGRGRGRGRGPSEKV
        RGFGRGRGRGRGPSEK+
Subjt:  RGFGRGRGRGRGPSEKV

A0A6J1G721 THO complex subunit 4A-like1.5e-11191.18Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED
        MAAPLDMSLDDIIKNNKKSRSG SRGRGRGSGPGPVRR PNRAA+RTPYSAPKAPETTWQHDMF D  +GF  Q GRAS+IQTGTKLYISNLDYGVSNED
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED

Query:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQR-
        IKELFSEVGDMKR+GIHYDKSGRSKGTAEVVFSRR DA AAVKKYNNVQLDGKPMKIEIVGTNI+T AVGP AAVNPFEN NGAPRRQQGRGG PSRQR 
Subjt:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQR-

Query:  GRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
        GRG GRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  GRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

A0A6J1L1M6 THO complex subunit 4A-like4.4e-11190.76Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED
        MAAPLDMSLDDIIKNNKKSRSG SRGRGRGSGPGPVRR PNRAA+RTPYSAPKAPETTWQHDMF D  +GF  Q GRAS+IQTGTKLYISNLDYGVSNED
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNED

Query:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQR-
        IKELFSEVGDMKR+GIHYDKSGRSKGTAEVVFSRR DA AAVKKYNNVQLDGKPMKIEIVGTNI+T AVGP AAVNPFEN NG PRRQQGRGG PSRQR 
Subjt:  IKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQR-

Query:  GRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
        GRG GRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
Subjt:  GRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

SwissProt top hitse value%identityAlignment
O08583 THO complex subunit 41.0e-4043.02Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRG-------------------SGPGPVRRFPNRAASR--------TPYSAPKAPETTWQHDMFADPSSGFIG
        MA  +DMSLDDIIK N+  R G   GRGRG                    G GP+R  P  A            PYS PK     WQHD+F    SGF G
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRG-------------------SGPGPVRRFPNRAASR--------TPYSAPKAPETTWQHDMFADPSSGFIG

Query:  QGGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTA
          G    ++TG KL +SNLD+GVS+ DI+ELF+E G +K+  +HYD+SGRS GTA+V F R+ DA+ A+K+YN V LDG+PM I++V + I T    P  
Subjt:  QGGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTA

Query:  AVNPFENSNGAPRRQQGRGGPPSRQRGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHA
        ++N    +        G GG     RG   GRGRG GR   +++SAE+LDA L+ Y+A
Subjt:  AVNPFENSNGAPRRQQGRGGPPSRQRGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHA

Q3T0I4 THO complex subunit 41.0e-4044.15Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRG-------------------SGPGPVRRFPNRAASR---------TPYSAPKAPETTWQHDMFADPSSGFI
        MA  +DMSLDDIIK N+  R G   GRGRG                    G GP+R  P  A             PYS PK     WQHD+F    SGF 
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRGRGRG-------------------SGPGPVRRFPNRAASR---------TPYSAPKAPETTWQHDMFADPSSGFI

Query:  GQGGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPT
        G  G    ++TG KL +SNLD+GVS+ DI+ELF+E G +K+  +HYD+SGRS GTA+V F R+ DA+ A+K+YN V LDG+PM I++V + I T    P 
Subjt:  GQGGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPT

Query:  AAVNPFENSNGAPRRQQGR----GGPPSRQRGRGFGRGRGRGRGPSEK--VSAEDLDADLEKYHA
         +VN      G   R +G     GG  +R+  RG  RGRGRG G S K  +SAE+LDA L+ Y+A
Subjt:  AAVNPFENSNGAPRRQQGR----GGPPSRQRGRGFGRGRGRGRGPSEK--VSAEDLDADLEKYHA

Q6NQ72 THO complex subunit 4D2.1e-4142.81Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGN---SRGRGR-----GSGPGPVRRFP---NRAASRTPYSAP--KAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKL
        M+  L+M+LD+I+K  K +RSG    SRGRGR     G G GP RR P   N   S    + P  +     WQ  +F D   G    G  AS ++ GT+L
Subjt:  MAAPLDMSLDDIIKNNKKSRSGN---SRGRGR-----GSGPGPVRRFP---NRAASRTPYSAP--KAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKL

Query:  YISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAV------------------
        +++NLD GV+NEDI+ELFSE+G+++R+ IHYDK+GR  GTAEVV+ RR DA  A+KKYNNV LDG+PM++EI+G N S+ A                   
Subjt:  YISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAV------------------

Query:  ---------------------GPTAAVN---PFENSNGAPRRQQGRGGPPSRQRGRGFGRGRGRGRGPSEK---VSAEDLDADLEKYHAESM
                             GP   V+   P  N  G   R  GRGG  +R RG G GRGRG GRG  +K    SA DLD DLE YHA++M
Subjt:  ---------------------GPTAAVN---PFENSNGAPRRQQGRGGPPSRQRGRGFGRGRGRGRGPSEK---VSAEDLDADLEKYHAESM

Q8L719 THO complex subunit 4B1.4e-6154.83Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRG-----------RGRGSGPGPVRRFPNRAASRT-PYSAP----KAPETTWQHDMFADPSSGFIGQG-------GR
        M+  LDMSLDDIIK+N+K      RG            G GS  GP RRF NR  +RT PYS P    +A +  WQ+D+FA  +S     G       G 
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRG-----------RGRGSGPGPVRRFPNRAASRT-PYSAP----KAPETTWQHDMFADPSSGFIGQG-------GR

Query:  ASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVN-
         S+I+TGTKLYISNLDYGVSNEDIKELFSEVGD+KR+GIHYD+SGRSKGTAEVVFSRR DA+AAVK+YNNVQLDGK MKIEIVGTN+S PA+   A    
Subjt:  ASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVN-

Query:  PF----------ENSNG-------APRRQQGRGGPPSRQRGRGFG----------RGRG----RGRGPSEKVSAEDLDADLEKYHAESMQ
        PF          EN NG          R +GRGG   R RG GFG          RGRG     GRG  E VSAEDLDA+L+KYH E+M+
Subjt:  PF----------ENSNG-------APRRQQGRGGPPSRQRGRGFG----------RGRG----RGRGPSEKVSAEDLDADLEKYHAESMQ

Q8L773 THO complex subunit 4A1.8e-6962.95Show/hide
Query:  MAAPLDMSLDDIIKNNKKSR--SGNSRGRGRGSGPGPVRR-FPNRAASRT-PYSAPKAPETTWQHDMFADPSSGFIGQGGRASA-IQTGTKLYISNLDYG
        M+  LDMSLDD+I  N+KSR  +G +RG G GSGPGP RR  PNR ++R+ PY + KAPE+TW HDMF+D S     + GR+SA I+TGTKLYISNLDYG
Subjt:  MAAPLDMSLDDIIKNNKKSR--SGNSRGRGRGSGPGPVRR-FPNRAASRT-PYSAPKAPETTWQHDMFADPSSGFIGQGGRASA-IQTGTKLYISNLDYG

Query:  VSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAP-RRQQGRGGP
        V NEDIKELF+EVG++KR+ +H+D+SGRSKGTAEVV+SRR DA+AAVKKYN+VQLDGKPMKIEIVGTN+ T A       N   NSNGAP R  QGRGG 
Subjt:  VSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAP-RRQQGRGGP

Query:  PSRQRG--------RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
          +QRG         G GRGR  G+GP+EK+SAEDLDADL+KYH+  M+ N
Subjt:  PSRQRG--------RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

Arabidopsis top hitse value%identityAlignment
AT5G02530.1 RNA-binding (RRM/RBD/RNP motifs) family protein9.9e-6354.83Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRG-----------RGRGSGPGPVRRFPNRAASRT-PYSAP----KAPETTWQHDMFADPSSGFIGQG-------GR
        M+  LDMSLDDIIK+N+K      RG            G GS  GP RRF NR  +RT PYS P    +A +  WQ+D+FA  +S     G       G 
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRG-----------RGRGSGPGPVRRFPNRAASRT-PYSAP----KAPETTWQHDMFADPSSGFIGQG-------GR

Query:  ASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVN-
         S+I+TGTKLYISNLDYGVSNEDIKELFSEVGD+KR+GIHYD+SGRSKGTAEVVFSRR DA+AAVK+YNNVQLDGK MKIEIVGTN+S PA+   A    
Subjt:  ASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVN-

Query:  PF----------ENSNG-------APRRQQGRGGPPSRQRGRGFG----------RGRG----RGRGPSEKVSAEDLDADLEKYHAESMQ
        PF          EN NG          R +GRGG   R RG GFG          RGRG     GRG  E VSAEDLDA+L+KYH E+M+
Subjt:  PF----------ENSNG-------APRRQQGRGGPPSRQRGRGFG----------RGRG----RGRGPSEKVSAEDLDADLEKYHAESMQ

AT5G02530.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.9e-6254.86Show/hide
Query:  MAAPLDMSLDDIIKNNKKSRSGNSRG-----------RGRGSGPGPVRRFPNRAASRT-PYSAP----KAPETTWQHDMFADPSSGFIGQG-------GR
        M+  LDMSLDDIIK+N+K      RG            G GS  GP RRF NR  +RT PYS P    +A +  WQ+D+FA  +S     G       G 
Subjt:  MAAPLDMSLDDIIKNNKKSRSGNSRG-----------RGRGSGPGPVRRFPNRAASRT-PYSAP----KAPETTWQHDMFADPSSGFIGQG-------GR

Query:  ASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVN-
         S+I+TGTKLYISNLDYGVSNEDIKELFSEVGD+KR+GIHYD+SGRSKGTAEVVFSRR DA+AAVK+YNNVQLDGK MKIEIVGTN+S PA+   A    
Subjt:  ASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVN-

Query:  PF----------ENSNGAPRRQ-----QGRGGPPSRQRGRGFG----------RGRG----RGRGPSEKVSAEDLDADLEKYHAESMQ
        PF          EN NG          +GRGG   R RG GFG          RGRG     GRG  E VSAEDLDA+L+KYH E+M+
Subjt:  PF----------ENSNGAPRRQ-----QGRGGPPSRQRGRGFG----------RGRG----RGRGPSEKVSAEDLDADLEKYHAESMQ

AT5G59950.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-7062.95Show/hide
Query:  MAAPLDMSLDDIIKNNKKSR--SGNSRGRGRGSGPGPVRR-FPNRAASRT-PYSAPKAPETTWQHDMFADPSSGFIGQGGRASA-IQTGTKLYISNLDYG
        M+  LDMSLDD+I  N+KSR  +G +RG G GSGPGP RR  PNR ++R+ PY + KAPE+TW HDMF+D S     + GR+SA I+TGTKLYISNLDYG
Subjt:  MAAPLDMSLDDIIKNNKKSR--SGNSRGRGRGSGPGPVRR-FPNRAASRT-PYSAPKAPETTWQHDMFADPSSGFIGQGGRASA-IQTGTKLYISNLDYG

Query:  VSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAP-RRQQGRGGP
        V NEDIKELF+EVG++KR+ +H+D+SGRSKGTAEVV+SRR DA+AAVKKYN+VQLDGKPMKIEIVGTN+ T A       N   NSNGAP R  QGRGG 
Subjt:  VSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAP-RRQQGRGGP

Query:  PSRQRG--------RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
          +QRG         G GRGR  G+GP+EK+SAEDLDADL+KYH+  M+ N
Subjt:  PSRQRG--------RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

AT5G59950.3 RNA-binding (RRM/RBD/RNP motifs) family protein9.2e-6962.55Show/hide
Query:  MAAPLDMSLDDIIKNNKKSR--SGNSRGRGRGSGPGPVRR-FPNRAASRT-PYSAPKAPETTWQHDMFADPSSGFIGQGGRASA-IQTGTKLYISNLDYG
        M+  LDMSLDD+I  N+KSR  +G +RG G GSGPGP RR  PNR ++R+ PY +  APE+TW HDMF+D S     + GR+SA I+TGTKLYISNLDYG
Subjt:  MAAPLDMSLDDIIKNNKKSR--SGNSRGRGRGSGPGPVRR-FPNRAASRT-PYSAPKAPETTWQHDMFADPSSGFIGQGGRASA-IQTGTKLYISNLDYG

Query:  VSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAP-RRQQGRGGP
        V NEDIKELF+EVG++KR+ +H+D+SGRSKGTAEVV+SRR DA+AAVKKYN+VQLDGKPMKIEIVGTN+ T A       N   NSNGAP R  QGRGG 
Subjt:  VSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAP-RRQQGRGGP

Query:  PSRQRG--------RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
          +QRG         G GRGR  G+GP+EK+SAEDLDADL+KYH+  M+ N
Subjt:  PSRQRG--------RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN

AT5G59950.5 RNA-binding (RRM/RBD/RNP motifs) family protein1.7e-7062.7Show/hide
Query:  MAAPLDMSLDDIIKNNKKSR--SGNSRGRGRGSGPGPVRR-FPNRAASRT-PYSAPKAPETTWQHDMFADPSSGFIGQGGRASA-IQTGTKLYISNLDYG
        M+  LDMSLDD+I  N+KSR  +G +RG G GSGPGP RR  PNR ++R+ PY + KAPE+TW HDMF+D S     + GR+SA I+TGTKLYISNLDYG
Subjt:  MAAPLDMSLDDIIKNNKKSR--SGNSRGRGRGSGPGPVRR-FPNRAASRT-PYSAPKAPETTWQHDMFADPSSGFIGQGGRASA-IQTGTKLYISNLDYG

Query:  VSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAP--RRQQGRGG
        V NEDIKELF+EVG++KR+ +H+D+SGRSKGTAEVV+SRR DA+AAVKKYN+VQLDGKPMKIEIVGTN+ T A       N   NSNGAP  R  QGRGG
Subjt:  VSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAP--RRQQGRGG

Query:  PPSRQRG--------RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
           +QRG         G GRGR  G+GP+EK+SAEDLDADL+KYH+  M+ N
Subjt:  PPSRQRG--------RGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCTCCTTTGGACATGAGTCTTGACGATATCATAAAGAACAACAAGAAATCCAGATCCGGAAATTCGAGAGGACGCGGAAGAGGTTCTGGACCTGGTCCCGTCCG
TCGATTTCCCAATCGCGCCGCTAGCCGCACACCTTATTCCGCTCCCAAGGCGCCGGAGACGACGTGGCAACATGATATGTTCGCCGATCCGAGTTCTGGATTCATTGGGC
AAGGTGGGCGAGCTTCTGCTATTCAGACTGGGACTAAGCTTTATATATCTAATTTAGATTACGGTGTTTCTAACGAAGATATTAAGGAGCTTTTTTCTGAAGTCGGTGAT
ATGAAACGTCACGGAATCCATTATGACAAAAGTGGGAGATCCAAGGGAACAGCGGAAGTAGTTTTCTCACGACGACTAGATGCTGTTGCGGCTGTCAAGAAGTACAACAA
CGTTCAGCTTGATGGAAAACCAATGAAGATAGAGATCGTTGGAACTAATATTTCCACGCCTGCTGTTGGTCCTACCGCTGCTGTGAACCCTTTCGAAAATTCAAATGGGG
CTCCGAGAAGGCAGCAAGGTAGGGGTGGTCCGCCATCACGCCAACGTGGTCGTGGTTTTGGAAGGGGGCGTGGGCGGGGAAGAGGCCCAAGTGAAAAGGTTTCTGCTGAA
GATCTTGATGCCGACTTGGAAAAGTATCATGCTGAGTCTATGCAGATAAATTAG
mRNA sequenceShow/hide mRNA sequence
GAAAATCGGCCTCCATCGCCAAAGCTCTCTGCCCAAACCATTTCACCGTCGCGGAATCTCCCAAACCCTAACTTCCCTTTTTCTTCTTAGTCTTCTCTTTTCGATTACTT
CCTTCACTGTTTTCGTCCAATTTCCCTTCAACCATGGCCGCTCCTTTGGACATGAGTCTTGACGATATCATAAAGAACAACAAGAAATCCAGATCCGGAAATTCGAGAGG
ACGCGGAAGAGGTTCTGGACCTGGTCCCGTCCGTCGATTTCCCAATCGCGCCGCTAGCCGCACACCTTATTCCGCTCCCAAGGCGCCGGAGACGACGTGGCAACATGATA
TGTTCGCCGATCCGAGTTCTGGATTCATTGGGCAAGGTGGGCGAGCTTCTGCTATTCAGACTGGGACTAAGCTTTATATATCTAATTTAGATTACGGTGTTTCTAACGAA
GATATTAAGGAGCTTTTTTCTGAAGTCGGTGATATGAAACGTCACGGAATCCATTATGACAAAAGTGGGAGATCCAAGGGAACAGCGGAAGTAGTTTTCTCACGACGACT
AGATGCTGTTGCGGCTGTCAAGAAGTACAACAACGTTCAGCTTGATGGAAAACCAATGAAGATAGAGATCGTTGGAACTAATATTTCCACGCCTGCTGTTGGTCCTACCG
CTGCTGTGAACCCTTTCGAAAATTCAAATGGGGCTCCGAGAAGGCAGCAAGGTAGGGGTGGTCCGCCATCACGCCAACGTGGTCGTGGTTTTGGAAGGGGGCGTGGGCGG
GGAAGAGGCCCAAGTGAAAAGGTTTCTGCTGAAGATCTTGATGCCGACTTGGAAAAGTATCATGCTGAGTCTATGCAGATAAATTAGTTGGTTCTTATATAGTGCTTTTG
GTTCAACGACCACGATCTATTCTCTGTATCACCACCATTGTCTAAACTTGGCAGAAAAGGGCTATAGTTTTTCCCTGAATTGGTTTGAATTTCTTTACAGCTTTTGGGCT
TTCTATTGTTAGATTTTGACTTCAGCACGGTAATGTAATTGATGAACAGTAGTCAGTGTGTACTCTGCTTTCATTCATTAAGTCCTTTCTGTTTCATTTAATGAGTTGGG
AATCAAAGGATCTACTATTTCCCTTAGCCTGATCACATCTGCAAGGGTGACATTGCTTGGAATAAAGCGCTGGCTGCTAATTATACAACAAATGAGTTGCGGTTCCCCAT
TGAGGGAACCTCAACTCAATAAATTTAATATGTAAGGCATTGAACTCAGAGTTGGCTATAACGTGCTAAAAGATGAACAGTCTTCGTAGCTATGGATCCGACTCGAGTCG
AATGAAATTAAGAAATTTCCAAGATGAATAAGCCTTTGTTGGTGTATGGAATCTTTGCCTGCGTATTATAGTAAAAATGCCTGATAATAGGTGAGATATCATTATTTTAA
AGTAATTGTCGTTCAAATGTGTGCAACTTGGTGGTGGTATTCTACTGCTGTGCGTGTGGAGAGAATCCGCAGAGCAGTTTGCCGCAACTCAGAGGCCTGCATTTGAGGTA
GCATACCATCACTGTTGAGGGACAGTCAAGTTTTTTTACTGCTCAAGTGCTAGTCTTGCAACATGATCTCTTTCATTAGACAATGGATAGCATCATGGCATTTTGACCCT
GATCAACGAGCGGTAAAAACTTGGTGTCTTCGGAATCATATTCAATGCATTTACATTTGTTTGAATATTTGAAAACAACCTGTGTGGGGATTGAGACGAATATGTTGGGG
TAAGGAGCAATGCCATTGGATTTTCATATGATTCTTTTCATGACATAGTATCAATAGCGTAAATAGGTATGTTGATATCACTTTCTTCATATTTCCATCCTCCCCTCCAA
TTAAACTTGGGCCAGTTTTGATTATTTATTTGTACAAAGCTATAATGTGTATGTCAATATCGATTTACGGCTGAGTGTGGTTTATATAGATGCTAGGATGTATAATGTTC
TAATTTATAGATTATTGCGTAGTTGGTCTGAGTAGCACAAATTAATATGTATTTTATGGTATATTGCGATGTTAAATGTGAAATAGAATATCAGACTGAAAGTCTTTTTG
ATTCCACAGTTAAATGTGGATGTATATATCTGATTTTGCACGATGGAATCAAATGGTGTCAGTGCTTGGAAGACGGCAACTCTCATTTAGAAGCCTTTTTTTTTCATCTT
TTTAGAAAAGAACAATACCAAACGATCAAACGTTGTTCTTTACACCAAGTCCTCATATAGGCCTTCGTATGTAAAGTTTAGGGTACTTTAAATCCTCTAAGTCGGTCTAT
ATCCTATTTTGTTCTTGAATCTTGCATCTTATTCTATTTTTGTCCAC
Protein sequenceShow/hide protein sequence
MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAASRTPYSAPKAPETTWQHDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGD
MKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRGRGFGRGRGRGRGPSEKVSAE
DLDADLEKYHAESMQIN