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IVF0024271 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024271
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionC2 domain-containing protein
Genome locationtig00000267:308329..309144
RNA-Seq ExpressionIVF0024271
SyntenyIVF0024271
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000008 - C2 domain
IPR035892 - C2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048969.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]1.87e-11897.77Show/hide
Query:  KLLSLKISVNALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRP
        K +SLKISVNALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTS WKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRP
Subjt:  KLLSLKISVNALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRP

Query:  APYNVVLEEDNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ
        APYNVVLEEDNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQR PICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ
Subjt:  APYNVVLEEDNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ

TYK17597.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]1.73e-12199.41Show/hide
Query:  NALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE
        N LGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE
Subjt:  NALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE

Query:  DNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ
        DNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ
Subjt:  DNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ

XP_016898949.1 PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g56570 [Cucumis melo]2.89e-11298.24Show/hide
Query:  NALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE
        N LGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTS WKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE
Subjt:  NALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE

Query:  DNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ
        DNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQR PICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ
Subjt:  DNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ

XP_031738549.1 16 kDa phloem protein 2 isoform X1 [Cucumis sativus]2.99e-10890.59Show/hide
Query:  NALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE
        N LGSPAYYVTVECGNHE RTKVSSGKHE ACWNEKFSFELPTS W NITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERG IEV PAPYNVVLEE
Subjt:  NALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE

Query:  DNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ
        DNTYKGEIKIGFKFF KEEIAL EARESIADGKLQR PICSK +NLWRIVWLKLSCFI HKNSSS +K Q
Subjt:  DNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ

XP_031738550.1 16 kDa phloem protein 2 isoform X2 [Cucumis sativus]6.47e-10990.59Show/hide
Query:  NALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE
        N LGSPAYYVTVECGNHE RTKVSSGKHE ACWNEKFSFELPTS W NITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERG IEV PAPYNVVLEE
Subjt:  NALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE

Query:  DNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ
        DNTYKGEIKIGFKFF KEEIAL EARESIADGKLQR PICSK +NLWRIVWLKLSCFI HKNSSS +K Q
Subjt:  DNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ

TrEMBL top hitse value%identityAlignment
A0A0A0L8X2 C2 domain-containing protein6.9e-8888.52Show/hide
Query:  MFVVKLLSLKISVNALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFI
        +F  KL+SLK+SV+ALGSPAYYVTVECGNHE RTKVSSGKHE ACWNEKFSFELPTS W NITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERG I
Subjt:  MFVVKLLSLKISVNALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFI

Query:  EVRPAPYNVVLEEDNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ
        EV PAPYNVVLEEDNTYKGEIKIGFKFF KEEIAL EARESIADGKLQR PICSK +NLWRIVWLKLSCFI HKNSSS +K Q
Subjt:  EVRPAPYNVVLEEDNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ

A0A1S4DSI8 LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g565709.3e-9398.24Show/hide
Query:  NALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE
        N LGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTS WKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE
Subjt:  NALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE

Query:  DNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ
        DNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQR PICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ
Subjt:  DNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ

A0A5A7U647 Putative pentatricopeptide repeat-containing protein1.1e-9697.77Show/hide
Query:  KLLSLKISVNALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRP
        K +SLKISVNALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTS WKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRP
Subjt:  KLLSLKISVNALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRP

Query:  APYNVVLEEDNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ
        APYNVVLEEDNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQR PICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ
Subjt:  APYNVVLEEDNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ

A0A5D3D0Z7 Putative pentatricopeptide repeat-containing protein2.9e-9499.41Show/hide
Query:  NALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE
        N LGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE
Subjt:  NALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE

Query:  DNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ
        DNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ
Subjt:  DNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ

A0A6J1ISM2 uncharacterized protein LOC111479016 isoform X21.3e-7078.24Show/hide
Query:  NALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE
        N  GS AYYV VECGN EHRTKVSSGKHE  CWNEKFSFELP+S WKNITHIKFRIME K L+NESVGA +IHLGGI+SEGYERGFIEVRPAPYNVVLEE
Subjt:  NALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE

Query:  DNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ
        D+TYKGEIKIGFKFF KEEI  MEARE IAD K +R  I  K MNLWR VWLKL C  GHK  SS +K Q
Subjt:  DNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ

SwissProt top hitse value%identityAlignment
Q9M2T2 16 kDa phloem protein 17.8e-0428.09Show/hide
Query:  WNEKFSF--ELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEEDNTYKGEIKIGFKFFIKEE
        WN+K  +  E P SG      +K    +T   +++ +G   +H+  ++  G E+G  E+RP  YN+V + D ++ GE+ IG  + + ++
Subjt:  WNEKFSF--ELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEEDNTYKGEIKIGFKFFIKEE

Arabidopsis top hitse value%identityAlignment
AT3G55470.1 Calcium-dependent lipid-binding (CaLB domain) family protein5.6e-0528.09Show/hide
Query:  WNEKFSF--ELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEEDNTYKGEIKIGFKFFIKEE
        WN+K  +  E P SG      +K    +T   +++ +G   +H+  ++  G E+G  E+RP  YN+V + D ++ GE+ IG  + + ++
Subjt:  WNEKFSF--ELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEEDNTYKGEIKIGFKFFIKEE

AT3G55470.2 Calcium-dependent lipid-binding (CaLB domain) family protein2.9e-0625.21Show/hide
Query:  LGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSF--ELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE
        LG    YV ++      ++ V+        WN+K  +  E P SG      +K    +T   +++ +G   +H+  ++  G E+G  E+RP  YN+V + 
Subjt:  LGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSF--ELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVVLEE

Query:  DNTYKGEIKIGFKFFIKEE
        D ++ GE+ IG  + + ++
Subjt:  DNTYKGEIKIGFKFFIKEE

AT4G00467.1 Calcium-dependent lipid-binding (CaLB domain) family protein1.6e-3642.6Show/hide
Query:  NALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNES-VGATVIHLGGIVSEGYERGFIEVRPAPYNVVLE
        N +G+P YYV ++CG  E+R+K+S G ++ A WN+KF F+ P S WK +T+IK RI++ +L N+   VG T+IHLGGI++EG +RG+IE++PAPYNVVLE
Subjt:  NALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNES-VGATVIHLGGIVSEGYERGFIEVRPAPYNVVLE

Query:  EDNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRI-------VWLKLSCFIGHK
        +D T+KGE+K+G +F   +++   +A E   + K     + S   NL ++        W +  C I  K
Subjt:  EDNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRI-------VWLKLSCFIGHK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTTGTAAAACTTCTTAGCCTGAAAATATCAGTTAATGCTTTAGGTTCCCCAGCATATTACGTGACGGTAGAATGTGGAAATCATGAACATAGAACAAAAGTATC
CTCAGGCAAACATGAACTTGCTTGTTGGAATGAGAAGTTTTCATTTGAACTCCCCACATCTGGTTGGAAAAACATAACTCATATCAAATTCAGAATCATGGAAACCAAAT
TGCTGAACAACGAATCCGTTGGAGCAACCGTAATCCATCTTGGTGGGATAGTTTCAGAGGGGTATGAAAGAGGATTCATAGAAGTAAGGCCAGCCCCATACAACGTAGTG
CTCGAGGAGGACAACACTTACAAAGGAGAAATAAAAATAGGATTCAAGTTCTTCATCAAAGAAGAAATAGCTCTAATGGAAGCAAGAGAGTCTATTGCAGATGGGAAACT
GCAAAGAAACCCGATCTGCAGCAAAGCTATGAACTTATGGAGAATTGTATGGTTGAAGTTATCCTGCTTCATTGGCCACAAGAATTCTTCCAGTGAACGAAAGACGCAAT
GA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTTGTAAAACTTCTTAGCCTGAAAATATCAGTTAATGCTTTAGGTTCCCCAGCATATTACGTGACGGTAGAATGTGGAAATCATGAACATAGAACAAAAGTATC
CTCAGGCAAACATGAACTTGCTTGTTGGAATGAGAAGTTTTCATTTGAACTCCCCACATCTGGTTGGAAAAACATAACTCATATCAAATTCAGAATCATGGAAACCAAAT
TGCTGAACAACGAATCCGTTGGAGCAACCGTAATCCATCTTGGTGGGATAGTTTCAGAGGGGTATGAAAGAGGATTCATAGAAGTAAGGCCAGCCCCATACAACGTAGTG
CTCGAGGAGGACAACACTTACAAAGGAGAAATAAAAATAGGATTCAAGTTCTTCATCAAAGAAGAAATAGCTCTAATGGAAGCAAGAGAGTCTATTGCAGATGGGAAACT
GCAAAGAAACCCGATCTGCAGCAAAGCTATGAACTTATGGAGAATTGTATGGTTGAAGTTATCCTGCTTCATTGGCCACAAGAATTCTTCCAGTGAACGAAAGACGCAAT
GA
Protein sequenceShow/hide protein sequence
MFVVKLLSLKISVNALGSPAYYVTVECGNHEHRTKVSSGKHELACWNEKFSFELPTSGWKNITHIKFRIMETKLLNNESVGATVIHLGGIVSEGYERGFIEVRPAPYNVV
LEEDNTYKGEIKIGFKFFIKEEIALMEARESIADGKLQRNPICSKAMNLWRIVWLKLSCFIGHKNSSSERKTQ