CuGenDBv2

Gene ID	IVF0024285
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	TPR_REGION domain-containing protein
Genome location	chr05:22994601..22998375
RNA-Seq Expression	IVF0024285
Synteny	IVF0024285
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

TYJ96494.1 uncharacterized protein E5676_scaffold546G001400 [Cucumis melo var. makuwa]

6.35e-175

93.28

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Query:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTGETTLVT--------LLLLFDGDVLGS
        MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTG              +LL   GDVLGS
Subjt:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTGETTLVT--------LLLLFDGDVLGS

Query:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV
        LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV
Subjt:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV

Query:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFSQ
        AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFSQ
Subjt:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFSQ

XP_004144772.1 uncharacterized protein LOC101209381 [Cucumis sativus]

1.16e-163

88.39

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Query:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTGETTLVT--------LLLLFDGDVLGS
        MAT+S LKSSIS+SHSLH SFTAPSF NS+KTIE FHSP+SLP+RITLNHVPPLSLSRRLFVPSVSGIWDALTG              +LL   GDVLGS
Subjt:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTGETTLVT--------LLLLFDGDVLGS

Query:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV
        LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFK+GGHPEKLV
Subjt:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV

Query:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFS
        AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQ IVAACQSTY QRSDDYMAALAKVHCL RNWSFS
Subjt:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFS

XP_008453971.1 PREDICTED: uncharacterized protein LOC103494530 [Cucumis melo]

1.23e-172

92.54

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Query:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTGETTLVT--------LLLLFDGDVLGS
        MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTG              +LL   GDVL S
Subjt:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTGETTLVT--------LLLLFDGDVLGS

Query:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV
        LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV
Subjt:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV

Query:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFSQ
        AAFSSGR NEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFSQ
Subjt:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFSQ

XP_023545315.1 uncharacterized protein LOC111804759 isoform X1 [Cucurbita pepo subsp. pepo]

4.28e-154

84.53

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Query:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTGE-------TTLVTLLLLF-DGDVLGS
        MA  S LK SIS+S S H SFTAPS  NS+K +EN HSPTS P++I LNHVPPLSLSRRLFVPSVSGIWDALTG        T +   +LLF +GDV GS
Subjt:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTGE-------TTLVTLLLLF-DGDVLGS

Query:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV
        LAEFDKAIELDPRQKAYLWQRGLSLYYLDRF+EGAEQFRLDVAQNPNDTEESIWCF+CEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFK+GGHPEKLV
Subjt:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV

Query:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWS
        AAFSSGRENEYFYASLYAGLYHEAEKK+DAAKQHIVAACQS YGQRSDDYMAALAKVHCL RNWS
Subjt:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWS

XP_038889663.1 uncharacterized protein LOC120079523 [Benincasa hispida]

4.13e-157

85.39

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Query:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTGETTLVT--------LLLLFDGDVLGS
        MA  S LKSSISISHSLH  F APSF NS+KT+E  HSP+SLP+RITLNHVPPLSLSRRLFVPSVSGIWDALTG              +LL   GDVLGS
Subjt:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTGETTLVT--------LLLLFDGDVLGS

Query:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV
        LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRD RPVMREAYNMFK+GGHPEKL+
Subjt:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV

Query:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFS
        AAFSSGRENEYFYASLYAGLYHEAEKK+DAAKQHIVAACQS YGQRSDDYMAAL +VHCL RNWSFS
Subjt:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGH0 TPR_REGION domain-containing protein

3.7e-127

88.39

Show/hide

Query:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTG--------ETTLVTLLLLFDGDVLGS
        MAT+S LKSSIS+SHSLH SFTAPSF NS+KTIE FHSP+SLP+RITLNHVPPLSLSRRLFVPSVSGIWDALTG              +LL   GDVLGS
Subjt:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTG--------ETTLVTLLLLFDGDVLGS

Query:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV
        LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFK+GGHPEKLV
Subjt:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV

Query:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFS
        AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQ IVAACQSTY QRSDDYMAALAKVHCL RNWSFS
Subjt:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFS

A0A1S3BXM7 uncharacterized protein LOC103494530

5.3e-134

92.54

Show/hide

Query:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTG--------ETTLVTLLLLFDGDVLGS
        MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTG              +LL   GDVL S
Subjt:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTG--------ETTLVTLLLLFDGDVLGS

Query:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV
        LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV
Subjt:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV

Query:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFSQ
        AAFSSGR NEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFSQ
Subjt:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFSQ

A0A5A7TX07 TPR_REGION domain-containing protein

5.3e-134

92.54

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Query:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTG--------ETTLVTLLLLFDGDVLGS
        MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTG              +LL   GDVL S
Subjt:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTG--------ETTLVTLLLLFDGDVLGS

Query:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV
        LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV
Subjt:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV

Query:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFSQ
        AAFSSGR NEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFSQ
Subjt:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFSQ

A0A5D3BC02 TPR_REGION domain-containing protein

9.7e-136

93.28

Show/hide

Query:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTG--------ETTLVTLLLLFDGDVLGS
        MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTG              +LL   GDVLGS
Subjt:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTG--------ETTLVTLLLLFDGDVLGS

Query:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV
        LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV
Subjt:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV

Query:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFSQ
        AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFSQ
Subjt:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFSQ

A0A6J1KHI1 uncharacterized protein LOC111493913 isoform X3

1.3e-119

84.15

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Query:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTG--------ETTLVTLLLLFDGDVLGS
        MA  S LK SIS+S S H SFTAPS  NS+K +EN HSP+SLP+RI LNHVPPLSLSRRLFVPSVSGIWDALTG              +LL  +GDV GS
Subjt:  MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTG--------ETTLVTLLLLFDGDVLGS

Query:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV
        LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNP+DTEESIWCF+CEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFK+GGHPEKLV
Subjt:  LAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLV

Query:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWS
        AAFSSGRENEYFYASLYAGLYHEAEKK+DAAKQHIVAACQS YGQRSDDYMAALAKVHCL RNWS
Subjt:  AAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G05625.1 Tetratricopeptide repeat (TPR)-like superfamily protein

2.8e-87

73.15

Show/hide

Query:  PPLSLSRRLFVPSVSGIWDALTG----------ETTLVTLLLLFDGDVLGSLAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDT
        PP +LSRRLF+PSVS IWDA+TG                + L   GDV GS+AEFD+AI LDPRQKAYLWQRGLSLYY+DRFEEGAEQFR+DVAQNPNDT
Subjt:  PPLSLSRRLFVPSVSGIWDALTG----------ETTLVTLLLLFDGDVLGSLAEFDKAIELDPRQKAYLWQRGLSLYYLDRFEEGAEQFRLDVAQNPNDT

Query:  EESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDD
        EESIWCF+CEA+L+GVD AR +FLEVGRD RPVMREAYN+FKNGG PEKLV  FSSG+ +EYFYASLYAGLY+EAE K + AK H+ AAC S YGQRSDD
Subjt:  EESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQSTYGQRSDD

Query:  YMAALAKVHCLRRNWS
        YMA+LAKVHCL RNWS
Subjt:  YMAALAKVHCLRRNWS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCTACAAATTCCATTCTCAAATCCTCCATTTCCATCTCCCATTCGCTTCACAATTCTTTCACCGCCCCTTCTTTCGCCAATTCATCCAAAACCATCGAAAATTTCCA
CTCTCCGACCTCTCTTCCGATCAGAATCACGCTCAATCACGTTCCCCCGTTGTCATTATCTAGAAGGCTGTTCGTTCCTTCCGTCTCTGGAATTTGGGACGCCTTAACAG
GGGAAACAACCCTCGTGACGCTGTTGCTGCTATTCGACGGCGATGTTTTGGGATCTTTAGCTGAATTCGATAAGGCAATTGAATTGGATCCTCGTCAAAAGGCATATCTT
TGGCAAAGAGGGCTTTCACTTTACTACCTTGATAGATTTGAAGAGGGAGCCGAACAGTTCCGACTAGATGTTGCACAAAATCCAAACGACACAGAGGAGTCTATTTGGTG
CTTTCTTTGTGAAGCTCAATTGTATGGAGTTGATGAAGCAAGAAGGCGATTTCTTGAGGTAGGTAGAGATCCACGACCAGTCATGCGGGAAGCTTACAATATGTTTAAAA
ATGGTGGGCATCCGGAGAAACTTGTTGCTGCTTTCTCAAGTGGCCGTGAGAATGAATATTTTTATGCCTCTCTATATGCCGGGCTTTATCATGAAGCAGAGAAAAAAGTA
GATGCAGCCAAACAACATATAGTTGCAGCTTGCCAGTCTACTTATGGACAGAGGTCTGATGATTACATGGCAGCTCTTGCCAAAGTTCACTGCCTCCGTCGAAACTGGAG
TTTCAGTCAGTAA

mRNA sequence

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Protein sequence

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MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRLFVPSVSGIWDALTGETTLVTLLLLFDGDVLGSLAEFDKAIELDPRQKAYL
WQRGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKNGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKV
DAAKQHIVAACQSTYGQRSDDYMAALAKVHCLRRNWSFSQ

IVF0024285 (gene) of Melon (IVF77) v1 genome