; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0024286 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024286
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGlycine-rich RNA-binding protein
Genome locationchr01:1926015..1929010
RNA-Seq ExpressionIVF0024286
SyntenyIVF0024286
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136860.1 glycine-rich RNA-binding protein RZ1A [Cucumis sativus]4.25e-13697.2Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGG-RYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRS
        GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGG RYGGRDDKY GGGGGGGG   RYGPDRNGDRFGGRNRS+GDRGGSGSDRYSRDRS
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGG-RYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRS

Query:  GPYERRGSGGFRSG
        GPYERRGSGGFRSG
Subjt:  GPYERRGSGGFRSG

XP_008455237.1 PREDICTED: glycine-rich RNA-binding protein RZ1A [Cucumis melo]4.43e-143100Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG
        GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG

Query:  PYERRGSGGFRSG
        PYERRGSGGFRSG
Subjt:  PYERRGSGGFRSG

XP_022154392.1 glycine-rich RNA-binding protein RZ1A [Momordica charantia]3.11e-12892.45Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+EVEYRCFIGGLSWSTSDR LKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG
         RDHDRDR RDFGG RGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY  GG    GGSGRYGPDRNGDRFGGRNRS+GDRGGSGSDR++RDRSG
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG

Query:  PYERRGSGGFRS
        PYERR SGGFRS
Subjt:  PYERRGSGGFRS

XP_023531290.1 glycine-rich RNA-binding protein RZ1A-like isoform X1 [Cucurbita pepo subsp. pepo]3.16e-12792.99Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG
         RD+DRDR RDFGG RGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKY GGGGGGGGGSGRYGPDRNGDR GGRNR TGDRGGSGSDRYSRDRSG
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG

Query:  PYERR--GSGGFRS
        PYERR  GSGGFRS
Subjt:  PYERR--GSGGFRS

XP_038888155.1 glycine-rich RNA-binding protein RZ1A [Benincasa hispida]2.20e-13898.12Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG
        GRDHDRDRGRD GGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY GGGG  GGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG

Query:  PYERRGSGGFRSG
        PYERRGSGGFRSG
Subjt:  PYERRGSGGFRSG

TrEMBL top hitse value%identityAlignment
A0A0A0K5W4 Uncharacterized protein1.7e-10697.2Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRS
        GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR GGRYGGRDDKY GGGGGGG   GRYGPDRNGDRFGGRNRS+GDRGGSGSDRYSRDRS
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR-GGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRS

Query:  GPYERRGSGGFRSG
        GPYERRGSGGFRSG
Subjt:  GPYERRGSGGFRSG

A0A1S3C164 glycine-rich RNA-binding protein RZ1A1.0e-111100Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG
        GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG

Query:  PYERRGSGGFRSG
        PYERRGSGGFRSG
Subjt:  PYERRGSGGFRSG

A0A6J1DLZ2 glycine-rich RNA-binding protein RZ1A4.1e-10092.45Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+EVEYRCFIGGLSWSTSDR LKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG
        GRDHDRDR RDFGG RGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKY      GGGGSGRYGPDRNGDRFGGRNRS+GDRGGSGSDR++RDRSG
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG

Query:  PYERRGSGGFRS
        PYERR SGGFRS
Subjt:  PYERRGSGGFRS

A0A6J1EI50 glycine-rich RNA-binding protein RZ1A-like1.2e-9691.12Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG
        GRD++RDR RDFGG RGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKY    GGGGGGSGRYGPDRNGDR GGRNR TGDRGGSGSDRYSRDRSG
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG

Query:  PYERR--GSGGFRS
        PYERR  GSGGFRS
Subjt:  PYERR--GSGGFRS

A0A6J1JNT9 glycine-rich RNA-binding protein RZ1A-like1.1e-9792.06Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA+E EYRCFIGGLSWSTSDRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRD+DGDRPR 
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG
        GRDHDRDR RDFGG RGSNS DCFKCGKPGHFARECPSEGGRGGRYGGRDDKY   GGG GGGSGRYGPDRNGDR GGRNR TGDRGGSGSDRYSRDRSG
Subjt:  GRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG

Query:  PYERR--GSGGFRS
        PYERR  GSGGFRS
Subjt:  PYERR--GSGGFRS

SwissProt top hitse value%identityAlignment
P49310 Glycine-rich RNA-binding protein GRP1A8.5e-2648.81Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++K+M +AI+ MNG DLDGRSITV++AQ ++GSG    G   RGG  
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD

Query:  HDRDRGRDFGGARGSNSGDCFKCGKPGHFA---RECPSEGGRGGRYGG---RDDKYGGGGGGGGGGSG
          R  G   GG  G   G     G+ G ++       S GG GG YGG   RD   GGG GG GGG G
Subjt:  HDRDRGRDFGGARGSNSGDCFKCGKPGHFA---RECPSEGGRGGRYGG---RDDKYGGGGGGGGGGSG

Q03250 Glycine-rich RNA-binding protein 71.4e-2547.43Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQP-NQGSGRDHDGD-----R
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ    G G  H G      R
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQP-NQGSGRDHDGD-----R

Query:  PRGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDK----YGGGGGGGGGGSGRYG
          GG  +    G  +GG  G   G     G  G ++    S GG GG YGG   +    YGGG GGG GGSG  G
Subjt:  PRGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDK----YGGGGGGGGGGSGRYG

Q05966 Glycine-rich RNA-binding protein 102.5e-2545.03Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD
        EVEYRCF+GGL+W+T D  L+  F +FG ++++K++ D+ +GRSRGFGFVTF ++K+M +AI  MNG +LDGR+ITV++AQ   G G    G    GGR 
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD

Query:  -----------HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR--GGRYGGRDDKYGGGGGGGG
                    DR  G  +G   G   G  +  G  G+        GGR  GG YGG D  YGGG GGGG
Subjt:  -----------HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGR--GGRYGGRDDKYGGGGGGGG

Q99070 Glycine-rich RNA-binding protein 23.8e-2643.23Show/hide
Query:  ADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGG
        A +VEYRCF+GGL+W+T++  L++AF  FG ++++KV+ D+ +GRSRGFGFVTF  +++M +AI+ MNG +LDGR+ITV++AQ   G G           
Subjt:  ADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGG

Query:  RDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGG-GGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSD
                   GG  G   G        G+  RE    GG GG YGGR +  GG GGGG GGG G YG    G  +GG     G+RG SG +
Subjt:  RDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGG-GGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSD

Q9LIN3 Glycine-rich RNA-binding protein RZ1A7.3e-6258.57Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR
        M+++ EYRCFIGGL+W+TSDRGL++AFEK+GHLVEAKVV+DKFSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR+ITVDKAQP+Q G+GRD+DGDR R
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR

Query:  GGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGG----------------RYGGRDDKYGGGG------------------------GG
          R +DRDR R  GG  G   GDCFKCGKPGHFARECPSE  R G                RYG +DD+YG                           G 
Subjt:  GGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGG----------------RYGGRDDKYGGGG------------------------GG

Query:  GGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYERRGSGGF
          GG  RYGPDR+G+R GGR+R  G RG  G +R+SR    PY+R  +GGF
Subjt:  GGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYERRGSGGF

Arabidopsis top hitse value%identityAlignment
AT2G21660.1 cold, circadian rhythm, and rna binding 21.0e-2647.43Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQP-NQGSGRDHDGD-----R
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ    G G  H G      R
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQP-NQGSGRDHDGD-----R

Query:  PRGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDK----YGGGGGGGGGGSGRYG
          GG  +    G  +GG  G   G     G  G ++    S GG GG YGG   +    YGGG GGG GGSG  G
Subjt:  PRGGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDK----YGGGGGGGGGGSGRYG

AT2G21660.2 cold, circadian rhythm, and rna binding 23.5e-2748.52Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGRSITV++AQ ++GSG    G   RGG  
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD

Query:  HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDK----YGGGGGGGGGGSGRYG
        +    GR  GG   S  G  +             S GG GG YGG   +    YGGG GGG GGSG  G
Subjt:  HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDK----YGGGGGGGGGGSGRYG

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain5.2e-6358.57Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR
        M+++ EYRCFIGGL+W+TSDRGL++AFEK+GHLVEAKVV+DKFSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR+ITVDKAQP+Q G+GRD+DGDR R
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQ-GSGRDHDGDRPR

Query:  GGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGG----------------RYGGRDDKYGGGG------------------------GG
          R +DRDR R  GG  G   GDCFKCGKPGHFARECPSE  R G                RYG +DD+YG                           G 
Subjt:  GGRDHDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGG----------------RYGGRDDKYGGGG------------------------GG

Query:  GGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYERRGSGGF
          GG  RYGPDR+G+R GGR+R  G RG  G +R+SR    PY+R  +GGF
Subjt:  GGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYERRGSGGF

AT4G39260.1 cold, circadian rhythm, and RNA binding 11.9e-2545.95Show/hide
Query:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD
        EVEYRCF+GGL+W+T+D  L+  F +FG ++++K++ D+ SGRSRGFGFVTF ++KAM +AI+ MNG +LDGR ITV++AQ ++GSG    G   RGG  
Subjt:  EVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRD

Query:  HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGG
                 GG   S  G  +  G  G ++      GG GG Y  R   YG GGGGGG G G  G    G   GG   S G  GG
Subjt:  HDRDRGRDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.3e-2138.53Show/hide
Query:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG
        MA +   R F+GGLS   +DR L+ AF +FG +++ ++++++ +GRSRGFGF+TF +++AMDE+I+ M+G D   R I+V++A+P  G   D +    RG
Subjt:  MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRG

Query:  GRDHDRD-RGR-DFGGARGS----NSGDCFKCGKPGHFARECPSE-GGRGGRYGGRDDKYGGGGGGGGG-----------GSGRYGPDR--NGDRFGGRN
        GRD      G+  FGG  G        +CFKCG+ GH+AR+CPS  GGRGG  GG   +    GG  G               RY  DR     R+G R+
Subjt:  GRDHDRD-RGR-DFGGARGS----NSGDCFKCGKPGHFARECPSE-GGRGGRYGGRDDKYGGGGGGGGG-----------GSGRYGPDR--NGDRFGGRN

Query:  RSTGDRGGSGSDRYSRDRSGPYERRGSGGFR
        R          DRY+ DR      R +GG R
Subjt:  RSTGDRGGSGSDRYSRDRSGPYERRGSGGFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGACGAGGTGGAGTATCGCTGCTTTATTGGCGGCCTTTCTTGGTCAACATCTGACAGAGGTCTGAAAGAGGCGTTTGAAAAGTTTGGGCATCTTGTCGAGGCCAA
GGTAGTTGTCGACAAATTTTCTGGACGTTCCCGTGGTTTTGGATTTGTCACTTTTGATGAGAAAAAAGCTATGGATGAGGCAATCAAAGCCATGAATGGAATGGATTTAG
ATGGCCGGAGCATTACAGTTGATAAGGCTCAACCAAACCAAGGTTCTGGTAGAGATCATGATGGTGACCGTCCACGTGGTGGTCGTGATCATGATCGCGATCGAGGTCGT
GATTTTGGTGGTGCACGTGGATCTAACAGTGGAGATTGCTTTAAATGTGGGAAACCTGGACATTTTGCTAGGGAATGTCCCAGTGAAGGTGGTAGAGGAGGTAGGTATGG
AGGTAGGGATGACAAATATGGTGGTGGTGGCGGCGGTGGTGGTGGCGGCAGTGGTCGATATGGTCCGGACCGAAATGGAGATAGATTTGGTGGGCGCAATAGGAGTACTG
GTGATCGAGGAGGTTCGGGAAGTGATCGATATAGCCGTGACCGCTCTGGTCCATATGAGCGACGTGGTTCTGGTGGTTTTCGTTCTGGATAG
mRNA sequenceShow/hide mRNA sequence
CTGCCTCTTTGCCCTACACCCACCCAGTTTTAACCAATATCACCGCCACTTTGCCTTCTCCAGCTTTTAGGTTCTCTCCTTAAGCGAATCCAATTCCTAAGGGCTAGGGC
TTTCGTTCTTCACAATTTCTCTCATAATGGCTGACGAGGTGGAGTATCGCTGCTTTATTGGCGGCCTTTCTTGGTCAACATCTGACAGAGGTCTGAAAGAGGCGTTTGAA
AAGTTTGGGCATCTTGTCGAGGCCAAGGTAGTTGTCGACAAATTTTCTGGACGTTCCCGTGGTTTTGGATTTGTCACTTTTGATGAGAAAAAAGCTATGGATGAGGCAAT
CAAAGCCATGAATGGAATGGATTTAGATGGCCGGAGCATTACAGTTGATAAGGCTCAACCAAACCAAGGTTCTGGTAGAGATCATGATGGTGACCGTCCACGTGGTGGTC
GTGATCATGATCGCGATCGAGGTCGTGATTTTGGTGGTGCACGTGGATCTAACAGTGGAGATTGCTTTAAATGTGGGAAACCTGGACATTTTGCTAGGGAATGTCCCAGT
GAAGGTGGTAGAGGAGGTAGGTATGGAGGTAGGGATGACAAATATGGTGGTGGTGGCGGCGGTGGTGGTGGCGGCAGTGGTCGATATGGTCCGGACCGAAATGGAGATAG
ATTTGGTGGGCGCAATAGGAGTACTGGTGATCGAGGAGGTTCGGGAAGTGATCGATATAGCCGTGACCGCTCTGGTCCATATGAGCGACGTGGTTCTGGTGGTTTTCGTT
CTGGATAGTATGGTGACTTTCCTTGTAGGCCAGCTTACATGGTGGGATCTTGCCGTTATGTACTGCACAGTGTTAATGTTTCTGTCTACAGGTTGTCTCTCGTACAGTTC
AGAGTTCTGAAGTGCAGAGCTTGACGTTAATGTTGAGATGTTTGTGTTCCTATGTGATGAATTTGGTATCTTGCTACAGTGGTGTGGTGTCTAATGTGTTCTTGACATAT
TCATTCAAACCTGGTTTTATGATCTTTAAGTGCCCATTGTAGCTGCTGCATAACTTGTGACACACACACAGGGAATTTCAATAACTGCTGCACCATTTCATTTTGAAAAA
AAATTTCTTTTAGAATACAACTAGACCTGGTTTTTGATATTGGATGGGTATTGACCATTGAGAGGACCTTGGCTTTTGATAAGCTGCAACTAGAGATTTGTGTCCTGACT
TGGAAACTTTGAAGTGAAATCTCCTTTTCAGAACGTTGGTTCCTATTGTCTTATAAATTCCACATGAGTTTACAGCATCCTTCCTTTTTATGGTCTTATTGGGTGCATAG
TACAGTTTCTTGTTAATTGGGCGCTTTAAACTTAAAAACTTACCAAAGCCTTTGGGATGCTCAAGCAATTTTGCAAATAAACACACTTAATCTTCAAATACGTCCTGCTG
GCTTATGGTTGAGGGGTATTTCATGTGCTAAAATGCTCGGCAAGTTGTGTTTGGACCATCTTTTGCACTTACGGTTCTATTTCCACTTTGTTCTTGTTGGGGGAGACTTT
TGATGTGTTCGTTCTTGCCTGTTGTGGATCTCTACTTGTTCTTGGTTTTGTTTGCGGAGATTAATTCAGATGTGTGATTCTCTGTGCATCCAAGGTTTTCATTCAAAGTT
TATTTGGAGTTTCTATAATGATCGTCCCCCTTTCTTCACCATCTGGATCAGTTTGGTTTCAAATCCATTGATTGTTCTTTCTCTTCTCCAAATGTGATCAAAGGACCCGT
TTCGCGTCTTCTGTAATTTTTACTCATATGTATCTCAATTTTTCATCCTTGTTTGCTGCCATGATGAATGTGTTACAACAATTAATGTTTAGCAATTATATTTTGAACTT
CTTTGACTTTTTTTTCTTTTTTTTCTTTTCATGGTTTCTTTTCCATATTTGTGTTCTTGTATCTATCCTTGTCCTGTAAGGGATGGATTTTTTTTTCCCTTCTATTTTTG
TGGCCCTAAACATTTTCAAGCTGTAAACTTTTTATGGTGAAGTCCAATATTGACATGTTTTTGGAAAGTGCAGGTCAAGTTATGTGAAATTTCACTTGGAATGTTTAAGG
TGTGTTTAGTTTGACTGTTTTTTAGCGAACAAAAAGTGTTTATAAACCCTTAGGAAAGTTAATTTAGTATGTTTATAATGCTCTTCTCTCCCTCTCTATGGTTTAATTCT
T
Protein sequenceShow/hide protein sequence
MADEVEYRCFIGGLSWSTSDRGLKEAFEKFGHLVEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRDHDRDRGR
DFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGRYGGRDDKYGGGGGGGGGGSGRYGPDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYERRGSGGFRSG