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IVF0024304 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024304
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr12:2258478..2258975
RNA-Seq ExpressionIVF0024304
SyntenyIVF0024304
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.22e-6264.85Show/hide
Query:  MDYLSRLLTDLESKRKIKGVNFRKQINLTHILFADNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSIN
        MDYLSRLL +L  KRKI GV F   +NLTHILFAD+I+IF+EDR  Y+S+LK ILHLFESA  LN+NL+KSTI PINV T+RA  I ++ GI K +L  +
Subjt:  MDYLSRLLTDLESKRKIKGVNFRKQINLTHILFADNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSIN

Query:  YLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSYISKGGRITLINSSLESLPTYHMYVFKAFKEV
        YLG+PLG +P S  FWDN+++KIQKKLS+WK+S +SKGGRITLINS+LESLP Y M VFK  K +
Subjt:  YLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSYISKGGRITLINSSLESLPTYHMYVFKAFKEV

KAA0044451.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.70e-6366.24Show/hide
Query:  MDYLSRLLTDLESKRKIKGVNFRKQINLTHILFADNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSIN
        MDYLSRLL +L  KRKI GVNF   +NLTHILFAD+I+IF+EDR  Y+S+LK ILHLFESA  LN+NL+KSTI PINV T+ A  I ++ GI K +L  +
Subjt:  MDYLSRLLTDLESKRKIKGVNFRKQINLTHILFADNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSIN

Query:  YLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSYISKGGRITLINSSLESLPTYHMY
        YLG+PLG KP S  FWDN+++KIQKKLSSWK+S +SKGGRITLINS+LESLP Y ++
Subjt:  YLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSYISKGGRITLINSSLESLPTYHMY

KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.52e-6165.45Show/hide
Query:  MDYLSRLLTDLESKRKIKGVNFRKQINLTHILFADNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSIN
        MDYLS LL +L  K KI GVNF   +NLTHILFAD+I+IF+ED+  Y+S+LK ILHLFESA  LN+NL+KSTI PINV T+RA+ IV++ GI K  L   
Subjt:  MDYLSRLLTDLESKRKIKGVNFRKQINLTHILFADNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSIN

Query:  YLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSYISKGGRITLINSSLESLPTYHMYVFKAFKEV
        YLG+PLG KP S  FWDNI++KIQKKLSSWK+S +SKGGRITLINS+LESLP Y + VFK  K +
Subjt:  YLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSYISKGGRITLINSSLESLPTYHMYVFKAFKEV

TYK29578.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.46e-6366.24Show/hide
Query:  MDYLSRLLTDLESKRKIKGVNFRKQINLTHILFADNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSIN
        MDYLSRLL +L  KRKI GVNF   +NLTHILFAD+I+IF+EDR  Y+S+LK ILHLFESA  LN+NL+KSTI PINV T+ A  I ++ GI K +L  +
Subjt:  MDYLSRLLTDLESKRKIKGVNFRKQINLTHILFADNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSIN

Query:  YLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSYISKGGRITLINSSLESLPTYHMY
        YLG+PLG KP S  FWDN+++KIQKKLSSWK+S +SKGGRITLINS+LESLP Y ++
Subjt:  YLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSYISKGGRITLINSSLESLPTYHMY

XP_016902104.1 PREDICTED: uncharacterized protein LOC107991539 [Cucumis melo]3.32e-86100Show/hide
Query:  DNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSINYLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSY
        DNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSINYLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSY
Subjt:  DNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSINYLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSY

Query:  ISKGGRITLINSSLESLPTYHMYVFKAFKEV
        ISKGGRITLINSSLESLPTYHMYVFKAFKEV
Subjt:  ISKGGRITLINSSLESLPTYHMYVFKAFKEV

TrEMBL top hitse value%identityAlignment
A0A1S4E1K3 uncharacterized protein LOC1079915391.9e-68100Show/hide
Query:  DNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSINYLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSY
        DNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSINYLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSY
Subjt:  DNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSINYLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSY

Query:  ISKGGRITLINSSLESLPTYHMYVFKAFKEV
        ISKGGRITLINSSLESLPTYHMYVFKAFKEV
Subjt:  ISKGGRITLINSSLESLPTYHMYVFKAFKEV

A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein3.8e-5364.85Show/hide
Query:  MDYLSRLLTDLESKRKIKGVNFRKQINLTHILFADNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSIN
        MDYLSRLL +L  KRKI GV F   +NLTHILFAD+I+IF+EDR  Y+S+LK ILHLFESA  LN+NL+KSTI PINV T+RA  I ++ GI K +L  +
Subjt:  MDYLSRLLTDLESKRKIKGVNFRKQINLTHILFADNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSIN

Query:  YLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSYISKGGRITLINSSLESLPTYHMYVFKAFKEV
        YLG+PLG +P S  FWDN+++KIQKKLS+WK+S +SKGGRITLINS+LESLP Y M VFK  K +
Subjt:  YLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSYISKGGRITLINSSLESLPTYHMYVFKAFKEV

A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein1.9e-5265.45Show/hide
Query:  MDYLSRLLTDLESKRKIKGVNFRKQINLTHILFADNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSIN
        MDYLS LL +L  K KI GVNF   +NLTHILFAD+I+IF+ED+  Y+S+LK ILHLFESA  LN+NL+KSTI PINV T+RA+ IV++ GI K  L   
Subjt:  MDYLSRLLTDLESKRKIKGVNFRKQINLTHILFADNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSIN

Query:  YLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSYISKGGRITLINSSLESLPTYHMYVFKAFKEV
        YLG+PLG KP S  FWDNI++KIQKKLSSWK+S +SKGGRITLINS+LESLP Y + VFK  K +
Subjt:  YLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSYISKGGRITLINSSLESLPTYHMYVFKAFKEV

A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein1.9e-5265.45Show/hide
Query:  MDYLSRLLTDLESKRKIKGVNFRKQINLTHILFADNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSIN
        MDYLS LL +L  K KI GVNF   +NLTHILFAD+I+IF+ED+  Y+S+LK ILHLFESA  LN+NL+KSTI PINV T+RA+ IV++ GI K  L   
Subjt:  MDYLSRLLTDLESKRKIKGVNFRKQINLTHILFADNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSIN

Query:  YLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSYISKGGRITLINSSLESLPTYHMYVFKAFKEV
        YLG+PLG KP S  FWDNI++KIQKKLSSWK+S +SKGGRITLINS+LESLP Y + VFK  K +
Subjt:  YLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSYISKGGRITLINSSLESLPTYHMYVFKAFKEV

A0A5D3BJP3 LINE-1 retrotransposable element ORF2 protein1.2e-5163.64Show/hide
Query:  MDYLSRLLTDLESKRKIKGVNFRKQINLTHILFADNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSIN
        MDYLSRLL +L  K KI GVNF   +NLTHILFAD+I+IF+ED+  Y+S+LK ILHLFESA  LN+NL+KSTI PINV  +RA+ I ++ GI K +L  +
Subjt:  MDYLSRLLTDLESKRKIKGVNFRKQINLTHILFADNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSIN

Query:  YLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSYISKGGRITLINSSLESLPTYHMYVFKAFKEV
        YLG+PLG KP S  FWDN+++KIQKKLSSWK+S +SKG RITLINS+LESLP Y + VFK  K +
Subjt:  YLGVPLGLKPPSLKFWDNIVEKIQKKLSSWKFSYISKGGRITLINSSLESLPTYHMYVFKAFKEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTACCTGAGTAGACTTCTTACTGATTTGGAAAGTAAAAGAAAAATAAAAGGGGTCAATTTCAGGAAACAAATCAATTTAACTCACATTCTTTTCGCAGACAATAT
TATAATCTTTATTGAAGACAGAGGCAAATATATATCTTCTTTGAAATTCATCCTTCACCTATTTGAGTCTGCATGGGACCTGAATTTAAACCTCAACAAATCTACAATCA
CTCCAATAAATGTGGACACAAACAGAGCTGATTTTATTGTTGAAAATTGCGGGATTAAGAAGGAATATCTGTCTATCAATTACCTTGGAGTTCCTTTGGGGCTAAAACCT
CCTTCTCTAAAGTTCTGGGACAACATTGTTGAGAAGATCCAAAAGAAACTTAGTAGCTGGAAATTCTCATACATCTCTAAAGGCGGAAGAATCACTCTCATTAACTCATC
ATTGGAAAGCCTCCCTACATATCATATGTATGTGTTCAAGGCTTTTAAAGAAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTACCTGAGTAGACTTCTTACTGATTTGGAAAGTAAAAGAAAAATAAAAGGGGTCAATTTCAGGAAACAAATCAATTTAACTCACATTCTTTTCGCAGACAATAT
TATAATCTTTATTGAAGACAGAGGCAAATATATATCTTCTTTGAAATTCATCCTTCACCTATTTGAGTCTGCATGGGACCTGAATTTAAACCTCAACAAATCTACAATCA
CTCCAATAAATGTGGACACAAACAGAGCTGATTTTATTGTTGAAAATTGCGGGATTAAGAAGGAATATCTGTCTATCAATTACCTTGGAGTTCCTTTGGGGCTAAAACCT
CCTTCTCTAAAGTTCTGGGACAACATTGTTGAGAAGATCCAAAAGAAACTTAGTAGCTGGAAATTCTCATACATCTCTAAAGGCGGAAGAATCACTCTCATTAACTCATC
ATTGGAAAGCCTCCCTACATATCATATGTATGTGTTCAAGGCTTTTAAAGAAGTTTAA
Protein sequenceShow/hide protein sequence
MDYLSRLLTDLESKRKIKGVNFRKQINLTHILFADNIIIFIEDRGKYISSLKFILHLFESAWDLNLNLNKSTITPINVDTNRADFIVENCGIKKEYLSINYLGVPLGLKP
PSLKFWDNIVEKIQKKLSSWKFSYISKGGRITLINSSLESLPTYHMYVFKAFKEV