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IVF0024307 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024307
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr07:5002428..5002667
RNA-Seq ExpressionIVF0024307
SyntenyIVF0024307
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037172.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.38e-1766.67Show/hide
Query:  VKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLSIFGART
        V+NHWK  C+EG GLSS  S  RPKK  AR   TQ SRPGVK  P TVSSLCFVL  SLSIF A T
Subjt:  VKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLSIFGART

KAA0057641.1 hypothetical protein E6C27_scaffold43054G00020 [Cucumis melo var. makuwa]2.94e-1358.46Show/hide
Query:  EGSSGVKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLS
        E SSG++NHWK  C+EG GLSS  S  RPKK  AR    Q SRPG K GP T+SSLC V  R+ S
Subjt:  EGSSGVKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLS

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.10e-1561.97Show/hide
Query:  EGSSGVKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLSIFGART
        E SSGV+NHWK TC+EG GL+S  S   PKK  AR   +Q SR G K    TVSSLCFVLV +LSIF ART
Subjt:  EGSSGVKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLSIFGART

TYK22521.1 uncharacterized protein E5676_scaffold387G00220 [Cucumis melo var. makuwa]5.34e-1867.61Show/hide
Query:  EGSSGVKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLSIFGART
        E SSGV+N WK TC EG GLSS  S  RPKK  AR   TQ SRPG K  P TVS+LC VLVRSLSIFGA T
Subjt:  EGSSGVKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLSIFGART

TYK23423.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]2.16e-1766.18Show/hide
Query:  SGVKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLSIFGART
        SGV+NHWK TC+EG GL+S  S VR KK  AR   T +S PG K  P  VSSLCFVLV SLSIFGART
Subjt:  SGVKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLSIFGART

TrEMBL top hitse value%identityAlignment
A0A5A7UVV0 Uncharacterized protein2.5e-1058.46Show/hide
Query:  EGSSGVKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLS
        E SSG++NHWK  C+EG GLSS  S  RPKK  AR    Q SRPG K GP T+SSLC V  R+ S
Subjt:  EGSSGVKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLS

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein2.0e-1261.97Show/hide
Query:  EGSSGVKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLSIFGART
        E SSGV+NHWK TC+EG GL+S  S   PKK  AR   +Q SR G K    TVSSLCFVLV +LSIF ART
Subjt:  EGSSGVKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLSIFGART

A0A5D3CQ36 Putative nuclease HARBI15.4e-1366.67Show/hide
Query:  VKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLSIFGART
        V+NHWK  C+EG GLSS  S  RPKK  AR   TQ SRPGVK  P TVSSLCFVL  SLSIF A T
Subjt:  VKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLSIFGART

A0A5D3DFP2 Uncharacterized protein2.2e-1467.61Show/hide
Query:  EGSSGVKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLSIFGART
        E SSGV+N WK TC EG GLSS  S  RPKK  AR   TQ SRPG K  P TVS+LC VLVRSLSIFGA T
Subjt:  EGSSGVKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLSIFGART

A0A5D3DIK9 DUF4283 domain-containing protein1.1e-1364.79Show/hide
Query:  EGSSGVKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLSIFGART
        E  SGV+NHWK TC+EG GL+S  S VR KK  AR   T +S PG K  P  VSSLCFVLV SLSIFGART
Subjt:  EGSSGVKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLSIFGART

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATGCTTCCAACGAGTGGGAAGGCTCGTCTGGTGTCAAAAATCACTGGAAACAAACTTGCAACGAAGGAATCGGGCTAAGCTCGATGATATCTGATGTTCGTCC
CAAGAAAATGATAGCAAGAGATGCCTGGACTCAGTTATCTCGTCCTGGGGTAAAAAGAGGTCCCACGACGGTTTCTTCCCTTTGCTTCGTATTGGTCAGAAGTCTTTCGA
TCTTTGGGGCTCGAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAATGCTTCCAACGAGTGGGAAGGCTCGTCTGGTGTCAAAAATCACTGGAAACAAACTTGCAACGAAGGAATCGGGCTAAGCTCGATGATATCTGATGTTCGTCC
CAAGAAAATGATAGCAAGAGATGCCTGGACTCAGTTATCTCGTCCTGGGGTAAAAAGAGGTCCCACGACGGTTTCTTCCCTTTGCTTCGTATTGGTCAGAAGTCTTTCGA
TCTTTGGGGCTCGAACTTGA
Protein sequenceShow/hide protein sequence
MANASNEWEGSSGVKNHWKQTCNEGIGLSSMISDVRPKKMIARDAWTQLSRPGVKRGPTTVSSLCFVLVRSLSIFGART