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IVF0024357 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024357
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE2
Genome locationchr12:22398120..22400050
RNA-Seq ExpressionIVF0024357
SyntenyIVF0024357
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056834.1 uncharacterized protein E6C27_scaffold96G00010 [Cucumis melo var. makuwa]5.83e-151100Show/hide
Query:  MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTKKGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNN
        MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTKKGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNN
Subjt:  MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTKKGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNN

Query:  PESNTPILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFLLKPSQTVDEAYST
        PESNTPILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFLLKPSQTVDEAYST
Subjt:  PESNTPILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFLLKPSQTVDEAYST

Query:  IIREKKGRKCSTSKKEAKY
        IIREKKGRKCSTSKKEAKY
Subjt:  IIREKKGRKCSTSKKEAKY

XP_004154160.1 uncharacterized protein LOC101211799 [Cucumis sativus]1.10e-8162.79Show/hide
Query:  MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTK----------KGKAVGCGSRKDGSGL--SHKKFSDYSPNHSPSPARTRD---
        ME RGI+SPRRS P +TPPAHLPGSTSAPELTIQS IP TTSNRRTTK          KGKA G GSRKDGSG   SHKK SDYSPNHSPSPA+TRD   
Subjt:  MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTK----------KGKAVGCGSRKDGSGL--SHKKFSDYSPNHSPSPARTRD---

Query:  ---LQQLSIHD--------------------DT--NEQNNPESNTP-ILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTC-TNSPQSSSNIAIVD
           LQQLSIHD                    DT   +Q+N ESN   +L KIY  IA HRQG TSIK+Y++NLKALW+EAA+S+  TNSPQSSSN   V+
Subjt:  ---LQQLSIHD--------------------DT--NEQNNPESNTP-ILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTC-TNSPQSSSNIAIVD

Query:  HIELMERDKLMLFLLGLKDSYSSLCSQFLL-KPSQTVDEAYSTIIREKKGRKCSTSKK
           LMER+KLM FLLGL DSYSSLCSQ LL +PS TVD+AYS II E+K RK   +KK
Subjt:  HIELMERDKLMLFLLGLKDSYSSLCSQFLL-KPSQTVDEAYSTIIREKKGRKCSTSKK

XP_008440818.1 PREDICTED: uncharacterized protein LOC103485124 [Cucumis melo]1.13e-14899.09Show/hide
Query:  MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTKKGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNN
        MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIP TTSNRRTTKKGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNN
Subjt:  MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTKKGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNN

Query:  PESNTPILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFLLKPSQTVDEAYST
        PESNTPILSKIYKEIAFHRQGKTSIKTYYENLK LWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFLLKPSQTVDEAYST
Subjt:  PESNTPILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFLLKPSQTVDEAYST

Query:  IIREKKGRKCSTSKKEAKY
        IIREKKGRKCSTSKKEAKY
Subjt:  IIREKKGRKCSTSKKEAKY

XP_011652556.2 uncharacterized protein LOC105435030 [Cucumis sativus]7.02e-6153.52Show/hide
Query:  MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTK----------KGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRD-----
        M SRG LSPRRSNP +TPP HL G+ SAPE TI  A P  TS++  TK          + K  G  + KDGS  SH KFSD SPNHSPSP +T D     
Subjt:  MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTK----------KGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRD-----

Query:  -LQQLSIH----------------------DDTNEQNNPESNTP-ILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCT-NSPQSSSNIAIVDHI
         L  LSIH                      D   EQ+N ESN+P +L KIY+ IA HRQG TSIK+Y+ NLKALWNEAA+S+   NSPQSSSN AI +  
Subjt:  -LQQLSIH----------------------DDTNEQNNPESNTP-ILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCT-NSPQSSSNIAIVDHI

Query:  ELMERDKLMLFLLGLKDSYSSLCSQFL-LKPSQTVDEAYSTIIREKKGRKCSTSKK
        E MER+KLM FLLGL DSYS LCSQ L ++PS TVD+AYS I+ E+K RK   +KK
Subjt:  ELMERDKLMLFLLGLKDSYSSLCSQFL-LKPSQTVDEAYSTIIREKKGRKCSTSKK

XP_038893970.1 uncharacterized protein LOC120082755 isoform X1 [Benincasa hispida]1.67e-3943.63Show/hide
Query:  MESRGILSPRRSNPNRTP------------------------PAHLPG------------------STSAPELTIQSAIPCTTSNRRTTKKGKAVGCGSR
        M +RG LSPRRS P  T                         P+  P                   S SAPE  + SA P  T  RRTTKKGK      +
Subjt:  MESRGILSPRRSNPNRTP------------------------PAHLPG------------------STSAPELTIQSAIPCTTSNRRTTKKGKAVGCGSR

Query:  KDGSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNNPESNTP-ILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIV
         DG    HK                      S+  DT +Q N +SN P IL KIY+EIA HR G ++IK+Y+ NLKALW+EAA+ T   +P SS  I  V
Subjt:  KDGSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNNPESNTP-ILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIV

Query:  DHIELMERDKLMLFLLGLKDSYSSLCSQFLL-KPSQTVDEAYSTIIREKKGRKCSTSKK
        +  ELMER+KLM FLLGL DSYSSLCSQ LL +PS TVD+AYS I+RE+K RK  TSKK
Subjt:  DHIELMERDKLMLFLLGLKDSYSSLCSQFLL-KPSQTVDEAYSTIIREKKGRKCSTSKK

TrEMBL top hitse value%identityAlignment
A0A0A0LRX9 Uncharacterized protein8.7e-3751.3Show/hide
Query:  SAPELTIQSAIPCTTSNRRTTK----------KGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRD------LQQLSIH------------------
        SAPE TI  A P  TS++  TK          + K  G  + KDGS  SH KFSD SPNHSPSP +T D      L  LSIH                  
Subjt:  SAPELTIQSAIPCTTSNRRTTK----------KGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRD------LQQLSIH------------------

Query:  ----DDTNEQNNPESNTP-ILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCT-NSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQF
            D   EQ+N ESN+P +L KIY+ IA HR+G TSIK+Y+ NLKALWNEAA+S+   NSPQSSSN AI +  E MER+KLM FLLGL DSYS LCSQ 
Subjt:  ----DDTNEQNNPESNTP-ILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCT-NSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQF

Query:  L-LKPSQTVDEAYSTIIREKKGRKCSTSKK
        L ++PS TVD+AYS I+ E+K RK   +KK
Subjt:  L-LKPSQTVDEAYSTIIREKKGRKCSTSKK

A0A1S3B205 uncharacterized protein LOC1034851242.3e-11499.09Show/hide
Query:  MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTKKGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNN
        MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIP TTSNRRTTKKGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNN
Subjt:  MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTKKGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNN

Query:  PESNTPILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFLLKPSQTVDEAYST
        PESNTPILSKIYKEIAFHRQGKTSIKTYYENLK LWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFLLKPSQTVDEAYST
Subjt:  PESNTPILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFLLKPSQTVDEAYST

Query:  IIREKKGRKCSTSKKEAKY
        IIREKKGRKCSTSKKEAKY
Subjt:  IIREKKGRKCSTSKKEAKY

A0A5A7UNP6 Uncharacterized protein4.2e-116100Show/hide
Query:  MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTKKGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNN
        MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTKKGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNN
Subjt:  MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTKKGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNN

Query:  PESNTPILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFLLKPSQTVDEAYST
        PESNTPILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFLLKPSQTVDEAYST
Subjt:  PESNTPILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFLLKPSQTVDEAYST

Query:  IIREKKGRKCSTSKKEAKY
        IIREKKGRKCSTSKKEAKY
Subjt:  IIREKKGRKCSTSKKEAKY

A0A5D3BHR0 Uncharacterized protein2.9e-1644.76Show/hide
Query:  SPSPARTRDLQQLSIHDDTNEQN--------NPESNTP-ILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDK
        SP P+R+     L++       N        + +SN P IL KIY+EIAFHRQG +SI +Y+  LK LW++ A +    +PQ SS+ AI    E MER+K
Subjt:  SPSPARTRDLQQLSIHDDTNEQN--------NPESNTP-ILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDK

Query:  LMLFLLGLKDSYSSLCSQFL-LKPSQTVDEAYSTIIREKKGRK
        ++ FL+GL DSYSS CS+ L ++P  TVD A+S IIR++  RK
Subjt:  LMLFLLGLKDSYSSLCSQFL-LKPSQTVDEAYSTIIREKKGRK

A0A5D3BLX6 Uncharacterized protein2.3e-11499.09Show/hide
Query:  MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTKKGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNN
        MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIP TTSNRRTTKKGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNN
Subjt:  MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTKKGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNN

Query:  PESNTPILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFLLKPSQTVDEAYST
        PESNTPILSKIYKEIAFHRQGKTSIKTYYENLK LWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFLLKPSQTVDEAYST
Subjt:  PESNTPILSKIYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFLLKPSQTVDEAYST

Query:  IIREKKGRKCSTSKKEAKY
        IIREKKGRKCSTSKKEAKY
Subjt:  IIREKKGRKCSTSKKEAKY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCGAGAGGGATTCTTAGTCCGAGGAGATCCAACCCCAATAGGACGCCACCTGCCCATCTTCCTGGCAGCACATCTGCCCCTGAATTAACCATTCAGTCAGCAAT
TCCCTGTACCACATCCAATCGGCGCACAACTAAGAAAGGCAAAGCAGTTGGGTGTGGCTCTCGTAAGGATGGTTCGGGTTTGAGTCATAAAAAGTTTTCTGATTATTCTC
CAAATCATTCTCCCAGCCCTGCCAGAACTCGTGATCTTCAACAACTTTCTATTCACGACGATACAAATGAACAAAATAATCCTGAAAGCAATACTCCGATATTATCTAAA
ATTTACAAAGAGATTGCATTTCATCGTCAAGGAAAGACATCCATTAAAACTTACTACGAAAATCTCAAGGCATTATGGAATGAAGCAGCTTCTTCAACCTGTACTAATTC
GCCTCAATCTTCCTCCAATATTGCAATTGTTGATCACATTGAGCTCATGGAAAGAGATAAACTAATGCTATTTCTTCTGGGACTAAAGGATTCGTATTCCTCACTTTGCT
CCCAATTCCTTCTTAAGCCATCTCAAACGGTGGACGAAGCTTATTCTACAATAATTAGAGAAAAAAAAGGAAGGAAATGCAGCACTTCCAAAAAAGAGGCAAAGTACTAG
mRNA sequenceShow/hide mRNA sequence
TGAGAAATTACCCTTTTTGTTTCCCATCTTAAATCCCCAAAGTCAAGTTCTCACATCACATCAGACAGAAAGATAAAGGTTGCAAATCGAAATATGGAATCGAGAGGGAT
TCTTAGTCCGAGGAGATCCAACCCCAATAGGACGCCACCTGCCCATCTTCCTGGCAGCACATCTGCCCCTGAATTAACCATTCAGTCAGCAATTCCCTGTACCACATCCA
ATCGGCGCACAACTAAGAAAGGCAAAGCAGTTGGGTGTGGCTCTCGTAAGGATGGTTCGGGTTTGAGTCATAAAAAGTTTTCTGATTATTCTCCAAATCATTCTCCCAGC
CCTGCCAGAACTCGTGATCTTCAACAACTTTCTATTCACGACGATACAAATGAACAAAATAATCCTGAAAGCAATACTCCGATATTATCTAAAATTTACAAAGAGATTGC
ATTTCATCGTCAAGGAAAGACATCCATTAAAACTTACTACGAAAATCTCAAGGCATTATGGAATGAAGCAGCTTCTTCAACCTGTACTAATTCGCCTCAATCTTCCTCCA
ATATTGCAATTGTTGATCACATTGAGCTCATGGAAAGAGATAAACTAATGCTATTTCTTCTGGGACTAAAGGATTCGTATTCCTCACTTTGCTCCCAATTCCTTCTTAAG
CCATCTCAAACGGTGGACGAAGCTTATTCTACAATAATTAGAGAAAAAAAAGGAAGGAAATGCAGCACTTCCAAAAAAGAGGCAAAGTACTAGTGAAAAAACATTTGGTT
TCATTTTTTCAGAAGCAACCTTTCTTCAACAGTTGTGATACTTATGCATTTTTTTTAATAGTTTACATCCTTATATGTTTCATCGTTTCTCCTTTAACATTTGAGTCCAA
AAGCGATGCCTTTAAATAAACAAAGAGTACACCCTTTGCGCTCAATTATATTAGAAAGCTTTCCTATAATTAACCTGTCCCTGCCTTTATTGTTTGTTCTCAAGTTTCTC
TCTAG
Protein sequenceShow/hide protein sequence
MESRGILSPRRSNPNRTPPAHLPGSTSAPELTIQSAIPCTTSNRRTTKKGKAVGCGSRKDGSGLSHKKFSDYSPNHSPSPARTRDLQQLSIHDDTNEQNNPESNTPILSK
IYKEIAFHRQGKTSIKTYYENLKALWNEAASSTCTNSPQSSSNIAIVDHIELMERDKLMLFLLGLKDSYSSLCSQFLLKPSQTVDEAYSTIIREKKGRKCSTSKKEAKY