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IVF0024368 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024368
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr07:11122701..11123182
RNA-Seq ExpressionIVF0024368
SyntenyIVF0024368
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054122.1 uncharacterized protein E6C27_scaffold131G00340 [Cucumis melo var. makuwa]4.31e-4858.67Show/hide
Query:  MRLQFADKSIAKPEDKIEDVLVKVDKFLFSTNFVLIILGWPFLSTSCTLIDVHQGELTMCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEEAYH
        MRLQF D+SIAKPE KIEDVLVK                 PFL     LIDVHQ EL+MCFNDEE+KFN    M F A+D  Y+ IESLGWDY +EE YH
Subjt:  MRLQFADKSIAKPEDKIEDVLVKVDKFLFSTNFVLIILGWPFLSTSCTLIDVHQGELTMCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEEAYH

Query:  KLSSIENFFEGEGPSHILEELNIVFSERKFETLDLQTKGEKKTMPSIEEP
        +L S E FFE E PS+ILEE+N++  + KFE+LDL+TKG+KK   SIEEP
Subjt:  KLSSIENFFEGEGPSHILEELNIVFSERKFETLDLQTKGEKKTMPSIEEP

KAA0054794.1 hypothetical protein E6C27_scaffold437G00790 [Cucumis melo var. makuwa]1.49e-5798.91Show/hide
Query:  MCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEEAYHKLSSIENFFEGEGPSHILEELNIVFSERKFETLDLQTKGEKKTMPSIEEP
        MCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEEAYHKLSSIENFFEGEGPSHILEELNIVFSERKFE+LDLQTKGEKKTMPSIEEP
Subjt:  MCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEEAYHKLSSIENFFEGEGPSHILEELNIVFSERKFETLDLQTKGEKKTMPSIEEP

KAA0060860.1 uncharacterized protein E6C27_scaffold137G00950 [Cucumis melo var. makuwa]1.47e-4861.15Show/hide
Query:  MRLQFADKSIAKPEDKIEDVLVKVDKFLFSTNFVL----------IILGWPFLSTSCTLIDVHQGELTMCFNDEEVKFNVVNEMTFSADDENYSVIESLG
        MRLQFAD+SI KPE KIE VLVKVDKFLFS +F++          IILG  FLST   LIDVHQGELTM  N E++K NVVN M F A+DE+ S IESLG
Subjt:  MRLQFADKSIAKPEDKIEDVLVKVDKFLFSTNFVL----------IILGWPFLSTSCTLIDVHQGELTMCFNDEEVKFNVVNEMTFSADDENYSVIESLG

Query:  WDYREEEAYHKLSSIENFFEGEGPSHILEELNIVFSERKFETLDLQTKGEKKTMPSI
        WDY EEEA     S E F + E  +   EE+N+V   RKFE+LDLQTKG+KKTMPS+
Subjt:  WDYREEEAYHKLSSIENFFEGEGPSHILEELNIVFSERKFETLDLQTKGEKKTMPSI

KAA0062395.1 uncharacterized protein E6C27_scaffold154G001730 [Cucumis melo var. makuwa]1.92e-4763.77Show/hide
Query:  KSIAKPEDKIEDVLVKVDKFLFSTNFVL----------IILGWPFLSTSCTLIDVHQGELTMCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEE
        + IAKPEDKIEDVLVKVDKF  ST+FV+          IILG PFLST CTLIDVHQ ELTM FN+EE+ FNV+N M F A+ ENYS IESLGWDY +EE
Subjt:  KSIAKPEDKIEDVLVKVDKFLFSTNFVL----------IILGWPFLSTSCTLIDVHQGELTMCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEE

Query:  AYHKLSSIENFFEGEGPSHILEELNIVFSERKFETLDL
        AY++L S E F E + P +ILEE+N V  E+KF+ LDL
Subjt:  AYHKLSSIENFFEGEGPSHILEELNIVFSERKFETLDL

TYJ99661.1 hypothetical protein E5676_scaffold562G00420 [Cucumis melo var. makuwa]3.67e-58100Show/hide
Query:  MCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEEAYHKLSSIENFFEGEGPSHILEELNIVFSERKFETLDLQTKGEKKTMPSIEEP
        MCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEEAYHKLSSIENFFEGEGPSHILEELNIVFSERKFETLDLQTKGEKKTMPSIEEP
Subjt:  MCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEEAYHKLSSIENFFEGEGPSHILEELNIVFSERKFETLDLQTKGEKKTMPSIEEP

TrEMBL top hitse value%identityAlignment
A0A5A7UE99 Uncharacterized protein1.2e-3758.67Show/hide
Query:  MRLQFADKSIAKPEDKIEDVLVKVDKFLFSTNFVLIILGWPFLSTSCTLIDVHQGELTMCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEEAYH
        MRLQF D+SIAKPE KIEDVLVK                 PFL     LIDVHQ EL+MCFNDEE+KFN    M F A+D  Y+ IESLGWDY +EE YH
Subjt:  MRLQFADKSIAKPEDKIEDVLVKVDKFLFSTNFVLIILGWPFLSTSCTLIDVHQGELTMCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEEAYH

Query:  KLSSIENFFEGEGPSHILEELNIVFSERKFETLDLQTKGEKKTMPSIEEP
        +L S E FFE E PS+ILEE+N++  + KFE+LDL+TKG+KK   SIEEP
Subjt:  KLSSIENFFEGEGPSHILEELNIVFSERKFETLDLQTKGEKKTMPSIEEP

A0A5A7UI16 Uncharacterized protein1.1e-4398.91Show/hide
Query:  MCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEEAYHKLSSIENFFEGEGPSHILEELNIVFSERKFETLDLQTKGEKKTMPSIEEP
        MCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEEAYHKLSSIENFFEGEGPSHILEELNIVFSERKFE+LDLQTKGEKKTMPSIEEP
Subjt:  MCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEEAYHKLSSIENFFEGEGPSHILEELNIVFSERKFETLDLQTKGEKKTMPSIEEP

A0A5A7V931 Uncharacterized protein9.2e-3863.77Show/hide
Query:  KSIAKPEDKIEDVLVKVDKFLFSTNFVL----------IILGWPFLSTSCTLIDVHQGELTMCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEE
        + IAKPEDKIEDVLVKVDKF  ST+FV+          IILG PFLST CTLIDVHQ ELTM FN+EE+ FNV+N M F A+ ENYS IESLGWDY +EE
Subjt:  KSIAKPEDKIEDVLVKVDKFLFSTNFVL----------IILGWPFLSTSCTLIDVHQGELTMCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEE

Query:  AYHKLSSIENFFEGEGPSHILEELNIVFSERKFETLDL
        AY++L S E F E + P +ILEE+N V  E+KF+ LDL
Subjt:  AYHKLSSIENFFEGEGPSHILEELNIVFSERKFETLDL

A0A5D3BLQ8 Uncharacterized protein3.9e-44100Show/hide
Query:  MCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEEAYHKLSSIENFFEGEGPSHILEELNIVFSERKFETLDLQTKGEKKTMPSIEEP
        MCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEEAYHKLSSIENFFEGEGPSHILEELNIVFSERKFETLDLQTKGEKKTMPSIEEP
Subjt:  MCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEEAYHKLSSIENFFEGEGPSHILEELNIVFSERKFETLDLQTKGEKKTMPSIEEP

A0A5D3DTC1 Uncharacterized protein1.2e-3764.71Show/hide
Query:  IAKPEDKIEDVLVKVDKFLFSTNFVL----------IILGWPFLSTSCTLIDVHQGELTMCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEEAY
        IAKPEDKIEDVLVKVDKF  ST+FV+          IILG PFLST CTLIDVHQ ELTM FN+EE+ FNV+N M F A+ ENYS IESLGWDY +EEAY
Subjt:  IAKPEDKIEDVLVKVDKFLFSTNFVL----------IILGWPFLSTSCTLIDVHQGELTMCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEEAY

Query:  HKLSSIENFFEGEGPSHILEELNIVFSERKFETLDL
        ++L S E F E + P +ILEE+N V  E+KF+ LDL
Subjt:  HKLSSIENFFEGEGPSHILEELNIVFSERKFETLDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCTCCAGTTTGCTGACAAATCCATCGCCAAGCCAGAGGACAAAATTGAAGATGTTTTGGTGAAGGTGGATAAATTTTTGTTCTCCACAAACTTTGTTTTAATCAT
TTTGGGGTGGCCATTCCTATCAACTAGCTGCACGCTCATAGACGTCCACCAAGGAGAGTTGACAATGTGTTTTAATGATGAAGAAGTTAAGTTTAACGTTGTCAATGAGA
TGACGTTTTCTGCTGATGATGAAAACTATAGCGTGATAGAGTCCCTTGGATGGGACTATCGAGAGGAAGAAGCCTACCATAAGCTGTCTAGCATTGAAAATTTCTTTGAA
GGAGAAGGCCCAAGTCATATACTGGAAGAATTAAACATCGTGTTTAGTGAAAGGAAGTTTGAGACTTTGGACTTGCAAACCAAAGGCGAGAAGAAGACAATGCCATCAAT
TGAGGAACCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCTCCAGTTTGCTGACAAATCCATCGCCAAGCCAGAGGACAAAATTGAAGATGTTTTGGTGAAGGTGGATAAATTTTTGTTCTCCACAAACTTTGTTTTAATCAT
TTTGGGGTGGCCATTCCTATCAACTAGCTGCACGCTCATAGACGTCCACCAAGGAGAGTTGACAATGTGTTTTAATGATGAAGAAGTTAAGTTTAACGTTGTCAATGAGA
TGACGTTTTCTGCTGATGATGAAAACTATAGCGTGATAGAGTCCCTTGGATGGGACTATCGAGAGGAAGAAGCCTACCATAAGCTGTCTAGCATTGAAAATTTCTTTGAA
GGAGAAGGCCCAAGTCATATACTGGAAGAATTAAACATCGTGTTTAGTGAAAGGAAGTTTGAGACTTTGGACTTGCAAACCAAAGGCGAGAAGAAGACAATGCCATCAAT
TGAGGAACCATAA
Protein sequenceShow/hide protein sequence
MRLQFADKSIAKPEDKIEDVLVKVDKFLFSTNFVLIILGWPFLSTSCTLIDVHQGELTMCFNDEEVKFNVVNEMTFSADDENYSVIESLGWDYREEEAYHKLSSIENFFE
GEGPSHILEELNIVFSERKFETLDLQTKGEKKTMPSIEEP