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IVF0024372 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024372
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr10:10002640..10002858
RNA-Seq ExpressionIVF0024372
SyntenyIVF0024372
Gene Ontology termsGO:0051716 - cellular response to stimulus (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0034061 - DNA polymerase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051536 - iron-sulfur cluster binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062448.1 disease resistance protein [Cucumis melo var. makuwa]1.51e-1559.15Show/hide
Query:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGFL-EFQNVEIDKIKESEEEVEEKGNEEDLPMMKFLL
        M G+  VIL+GDPSL K EC LKTI+KTW+ +DQGFL EFQ +EI+   E E E EE+G E +LPM++ LL
Subjt:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGFL-EFQNVEIDKIKESEEEVEEKGNEEDLPMMKFLL

KAA0066418.1 ty3-gypsy retroelement transposase [Cucumis melo var. makuwa]4.28e-1964.29Show/hide
Query:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGFL-EFQNVEIDKIKESEEEVEEKGNEEDLPMMKFL
        MAG  P+IL+GDPSL KVE  LKTITKTWD++DQ FL EF N+EI+     + EVEEK +EEDLPM+K L
Subjt:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGFL-EFQNVEIDKIKESEEEVEEKGNEEDLPMMKFL

TYJ98046.1 peroxidase 64 [Cucumis melo var. makuwa]7.66e-1659.15Show/hide
Query:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGFL-EFQNVEIDKIKESEEEVEEKGNEEDLPMMKFLL
        M G+  VIL+GDPSL K EC LKTI+KTW+ +DQGFL EFQ +EI+   E E E EE+G E +LPM++ LL
Subjt:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGFL-EFQNVEIDKIKESEEEVEEKGNEEDLPMMKFLL

TYK23088.1 pleiotropic drug resistance protein 1-like [Cucumis melo var. makuwa]8.43e-1760.56Show/hide
Query:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGFL-EFQNVEIDKIKESEEEVEEKGNEEDLPMMKFLL
        MAG   VIL GD S  K EC LKTI+KTW+ +DQGFL EFQNVEID+  E E + EE+G E +LPM++ LL
Subjt:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGFL-EFQNVEIDKIKESEEEVEEKGNEEDLPMMKFLL

TYK27437.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.52e-1559.15Show/hide
Query:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGFL-EFQNVEIDKIKESEEEVEEKGNEEDLPMMKFLL
        M G+  VIL+GDPSL K EC LKTI+KTW+ +DQGFL EFQ +EI+   E E E EE+G E +LPM++ LL
Subjt:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGFL-EFQNVEIDKIKESEEEVEEKGNEEDLPMMKFLL

TrEMBL top hitse value%identityAlignment
A0A5A7V4D8 Disease resistance protein8.4e-1359.15Show/hide
Query:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGFL-EFQNVEIDKIKESEEEVEEKGNEEDLPMMKFLL
        M G+  VIL+GDPSL K EC LKTI+KTW+ +DQGFL EFQ +EI+   E E E EE+G E +LPM++ LL
Subjt:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGFL-EFQNVEIDKIKESEEEVEEKGNEEDLPMMKFLL

A0A5D3BG24 Peroxidase 648.4e-1359.15Show/hide
Query:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGFL-EFQNVEIDKIKESEEEVEEKGNEEDLPMMKFLL
        M G+  VIL+GDPSL K EC LKTI+KTW+ +DQGFL EFQ +EI+   E E E EE+G E +LPM++ LL
Subjt:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGFL-EFQNVEIDKIKESEEEVEEKGNEEDLPMMKFLL

A0A5D3BNM8 Ty3-gypsy retroelement transposase4.4e-1463.01Show/hide
Query:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGFL-EFQNVEIDKIKESEEEVEEKGNEEDLPMMKFLLEQ
        MAG  P+IL+GDPSL KVE  LKTITKTWD++DQ FL EF N+EI+     + EVEEK +EEDLPM+K L  Q
Subjt:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGFL-EFQNVEIDKIKESEEEVEEKGNEEDLPMMKFLLEQ

A0A5D3DG25 Reverse transcriptase1.4e-1259.15Show/hide
Query:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGF-LEFQNVEIDKIKESEEEVEEKGNEEDLPMMKFLL
        MAG   V+L+GDPSL K+EC LKTI+KTW+ +DQGF LEFQ VEI+   E E E EE+G +  LPM++ LL
Subjt:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGF-LEFQNVEIDKIKESEEEVEEKGNEEDLPMMKFLL

A0A5D3DUJ0 Ty3/gypsy retrotransposon protein8.4e-1359.15Show/hide
Query:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGFL-EFQNVEIDKIKESEEEVEEKGNEEDLPMMKFLL
        M G+  VIL+GDPSL K EC LKTI+KTW+ +DQGFL EFQ +EI+   E E E EE+G E +LPM++ LL
Subjt:  MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGFL-EFQNVEIDKIKESEEEVEEKGNEEDLPMMKFLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGTAACCACCCAGTCATACTCAGGGGAGACCCATCTCTGCCTAAAGTTGAATGCTTGCTGAAAACCATTACAAAAACGTGGGACGTTGACGATCAAGGATTTCT
AGAATTCCAAAATGTTGAGATTGACAAAATAAAGGAGTCTGAAGAAGAAGTTGAAGAAAAAGGGAATGAGGAAGATTTACCAATGATGAAATTCTTGCTAGAGCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGTAACCACCCAGTCATACTCAGGGGAGACCCATCTCTGCCTAAAGTTGAATGCTTGCTGAAAACCATTACAAAAACGTGGGACGTTGACGATCAAGGATTTCT
AGAATTCCAAAATGTTGAGATTGACAAAATAAAGGAGTCTGAAGAAGAAGTTGAAGAAAAAGGGAATGAGGAAGATTTACCAATGATGAAATTCTTGCTAGAGCAATAA
Protein sequenceShow/hide protein sequence
MAGNHPVILRGDPSLPKVECLLKTITKTWDVDDQGFLEFQNVEIDKIKESEEEVEEKGNEEDLPMMKFLLEQ