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IVF0024375 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024375
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGlial fibrillary acidic protein-like
Genome locationchr02:10486614..10488019
RNA-Seq ExpressionIVF0024375
SyntenyIVF0024375
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]1.73e-6655.92Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPINPWNKTRNTIREFNSAHWDPKDPEFGQFGEPLDAHKSFDIPLWEVGFYPTIRLMGGHCLFSSFGI-----TSIMV
        M ETFRSLNHCRIQ            P+N  R  +                    PLDAHKSFD PLW++G+YPTIRLMGG   +S   +     +    
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPINPWNKTRNTIREFNSAHWDPKDPEFGQFGEPLDAHKSFDIPLWEVGFYPTIRLMGGHCLFSSFGI-----TSIMV

Query:  KTICASCMWLEDWEFSYESNIANDKIHEAVEAWKFIKKMKSLRHCE-----------------------------ELKKYHDKEKELKRLREMNCVLATE
          +C     LEDWEFSYESNIAN+KIHEAVEAWKF+KKMKSLRHCE                             ELKKYHDKEKELKRLREMNCV+ATE
Subjt:  KTICASCMWLEDWEFSYESNIANDKIHEAVEAWKFIKKMKSLRHCE-----------------------------ELKKYHDKEKELKRLREMNCVLATE

Query:  NEKLREEVKKWVQQAVNTQRDLDESKRKRLELEGKR-FLNTEAIQ
        NEKLREEVKKWVQQAVNTQRDLDE+KRK LELE +   LNTEAIQ
Subjt:  NEKLREEVKKWVQQAVNTQRDLDESKRKRLELEGKR-FLNTEAIQ

KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]2.71e-9553.19Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPI-----------------------NPWNKTRNTIREFNSAHWDPKDPEFGQFGEPLDAHKSFDI-PLWEVGFYPTI
        MAETFRSLNHCRIQGKGKFFSCAP+                       +PWNKTRNTIREFNSAHWDPKDPEFG +G  +       +   W   F P +
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPI-----------------------NPWNKTRNTIREFNSAHWDPKDPEFGQFGEPLDAHKSFDI-PLWEVGFYPTI

Query:  RLMGGHCLFSSFGITSIMVKTICASCMWLEDWEFSYESNIANDKIHEAVEAWKFIKKMKSLRHCE-----------------------------ELKKYH
                              C     LEDWEFSYESNIANDKIHEAVEAWKF+KKMKSLRHCE                             ELKKYH
Subjt:  RLMGGHCLFSSFGITSIMVKTICASCMWLEDWEFSYESNIANDKIHEAVEAWKFIKKMKSLRHCE-----------------------------ELKKYH

Query:  DKEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDESKRKRLEL---------------------EGKRFLNTEAI-----------------
        DKEKELKRLREMNCVLATENEKLREEVKKWVQQAVNT RDLDE+KRKRLE                      E K     +A+                 
Subjt:  DKEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDESKRKRLEL---------------------EGKRFLNTEAI-----------------

Query:  ---------------------QDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKD
                             +DEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDK+
Subjt:  ---------------------QDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKD

KAA0065295.1 uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa]1.69e-3854.55Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPI-----------------------NPWNKTRNTIREFNSAHWDPKDPEFGQFGEPLDAHKSFDIPLWEVGFYPT--
        MAETFRSLNHC+IQGKGKFFSCAP+                       +PWNKTRNTIREFNSAHWDPKDPEFG + +   +H +    +W   + PT  
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPI-----------------------NPWNKTRNTIREFNSAHWDPKDPEFGQFGEPLDAHKSFDIPLWEVGFYPT--

Query:  -------------IRLMGGHCLFSSFGITSIMVKTICASCMWL
                     + L GGHCLFSSFGITSIMVKTICASCMW+
Subjt:  -------------IRLMGGHCLFSSFGITSIMVKTICASCMWL

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]5.48e-7353.36Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPI-----------------------NPWNKTRNTIREFNSAHWDPKDPEFGQFGEPLDAHKSFDIPLWEVGFYPT--
        M ETFRSLNHCRIQGKGKFFSCAP+                       +PWN TRNTIREFNSAHWDPKD EFG + +      + D  +W   +  T  
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPI-----------------------NPWNKTRNTIREFNSAHWDPKDPEFGQFGEPLDAHKSFDIPLWEVGFYPT--

Query:  -------------IRLMGGHCLFSSFGI-----TSIMVKTICASCMWLEDWEFSYESNIANDKIHEAVEAWKFIKKMKSLRHCE----------------
                     + L GG   +S   +     +      +C     LEDWEFSYESNIAN+KIHEAVEAWKF+KKMKSLRHCE                
Subjt:  -------------IRLMGGHCLFSSFGI-----TSIMVKTICASCMWLEDWEFSYESNIANDKIHEAVEAWKFIKKMKSLRHCE----------------

Query:  -------------ELKKYHDKEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDESKRKRLELEGKR-FLNTEAIQ
                     ELKKYHDKEKELKRLREMNCV+ATENEKLREEVKKWVQQAVNTQRDLDE+KRK LELE +   LNTEAIQ
Subjt:  -------------ELKKYHDKEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDESKRKRLELEGKR-FLNTEAIQ

XP_008464352.1 PREDICTED: glial fibrillary acidic protein-like, partial [Cucumis melo]1.67e-3546.64Show/hide
Query:  ELKKYHDKEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDESKRKRLELEGKR-FLNTEAIQ------------------------------
        ELKKYHD+EKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDE+KRKRLELE +   LNTEAIQ                              
Subjt:  ELKKYHDKEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDESKRKRLELEGKR-FLNTEAIQ------------------------------

Query:  --------------------------------------------------------------------------------DEYETLRRKYDDAIGRMERG
                                                                                        DEYETLRRKYDDAI RMERG
Subjt:  --------------------------------------------------------------------------------DEYETLRRKYDDAIGRMERG

Query:  AEKLRQMARVADQFSVQARTLRQ
        AEKLRQMA VADQFSVQARTLRQ
Subjt:  AEKLRQMARVADQFSVQARTLRQ

TrEMBL top hitse value%identityAlignment
A0A1S3CLQ1 glial fibrillary acidic protein-like3.5e-3046.64Show/hide
Query:  ELKKYHDKEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDESKRKRLELEGKR-FLNTEAIQ------------------------------
        ELKKYHD+EKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDE+KRKRLELE +   LNTEAIQ                              
Subjt:  ELKKYHDKEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDESKRKRLELEGKR-FLNTEAIQ------------------------------

Query:  --------------------------------------------------------------------------------DEYETLRRKYDDAIGRMERG
                                                                                        DEYETLRRKYDDAI RMERG
Subjt:  --------------------------------------------------------------------------------DEYETLRRKYDDAIGRMERG

Query:  AEKLRQMARVADQFSVQARTLRQ
        AEKLRQMA VADQFSVQARTLRQ
Subjt:  AEKLRQMARVADQFSVQARTLRQ

A0A5A7SNY0 Glial fibrillary acidic protein-like1.5e-5756.85Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPINPWNKTRNTIREFNSAHWDPKDPEFGQFGEPLDAHKSFDIPLWEVGFYPTIRLMGGHCLFSS-FGITSIMVKTIC
        M ETFRSLNHCRIQ            P+N  R  +                    PLDAHKSFD PLW++G+YPTIRLMGG   +S    +     K   
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPINPWNKTRNTIREFNSAHWDPKDPEFGQFGEPLDAHKSFDIPLWEVGFYPTIRLMGGHCLFSS-FGITSIMVKTIC

Query:  ASCMWLEDWEFSYESNIANDKIHEAVEAWKFIKKMKSLRHCE-----------------------------ELKKYHDKEKELKRLREMNCVLATENEKL
             LEDWEFSYESNIAN+KIHEAVEAWKF+KKMKSLRHCE                             ELKKYHDKEKELKRLREMNCV+ATENEKL
Subjt:  ASCMWLEDWEFSYESNIANDKIHEAVEAWKFIKKMKSLRHCE-----------------------------ELKKYHDKEKELKRLREMNCVLATENEKL

Query:  REEVKKWVQQAVNTQRDLDESKRKRLELEGKR-FLNTEAIQ
        REEVKKWVQQAVNTQRDLDE+KRK LELE +   LNTEAIQ
Subjt:  REEVKKWVQQAVNTQRDLDESKRKRLELEGKR-FLNTEAIQ

A0A5A7SUT0 Reverse transcriptase6.5e-8553.07Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPI-----------------------NPWNKTRNTIREFNSAHWDPKDPEFGQFGEPLDAHKSFDIPLWEVGFYPTIR
        MAETFRSLNHCRIQGKGKFFSCAP+                       +PWNKTRNTIREFNSAHWDPKDPEFG +G                       
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPI-----------------------NPWNKTRNTIREFNSAHWDPKDPEFGQFGEPLDAHKSFDIPLWEVGFYPTIR

Query:  LMGGHCLFSSFGITSIMVKTICASCMWLEDWEFSYESNIANDKIHEAVEAWKFIKKMKSLRHCE-----------------------------ELKKYHD
          GG        +     K        LEDWEFSYESNIANDKIHEAVEAWKF+KKMKSLRHCE                             ELKKYHD
Subjt:  LMGGHCLFSSFGITSIMVKTICASCMWLEDWEFSYESNIANDKIHEAVEAWKFIKKMKSLRHCE-----------------------------ELKKYHD

Query:  KEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDESKRKRL---------------------ELEGKRFLNTEAI------------------
        KEKELKRLREMNCVLATENEKLREEVKKWVQQAVNT RDLDE+KRKRL                     E E K     +A+                  
Subjt:  KEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDESKRKRL---------------------ELEGKRFLNTEAI------------------

Query:  --------------------QDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKD
                            +DEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDK+
Subjt:  --------------------QDEYETLRRKYDDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKD

A0A5A7VHI3 Uncharacterized protein7.5e-3354.55Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPI-----------------------NPWNKTRNTIREFNSAHWDPKDPEFGQFGEPLDAHKSFDIPLWEVGFYPT--
        MAETFRSLNHC+IQGKGKFFSCAP+                       +PWNKTRNTIREFNSAHWDPKDPEFG + +   +H +    +W   + PT  
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPI-----------------------NPWNKTRNTIREFNSAHWDPKDPEFGQFGEPLDAHKSFDIPLWEVGFYPT--

Query:  -------------IRLMGGHCLFSSFGITSIMVKTICASCMWL
                     + L GGHCLFSSFGITSIMVKTICASCMW+
Subjt:  -------------IRLMGGHCLFSSFGITSIMVKTICASCMWL

A0A5D3D0S2 Glial fibrillary acidic protein-like3.1e-6354.12Show/hide
Query:  MAETFRSLNHCRIQGKGKFFSCAPI-----------------------NPWNKTRNTIREFNSAHWDPKDPEFGQFGEPLDAHKSFDIPLWEVGFYPT--
        M ETFRSLNHCRIQGKGKFFSCAP+                       +PWN TRNTIREFNSAHWDPKD EFG + +   +H +    +W   +  T  
Subjt:  MAETFRSLNHCRIQGKGKFFSCAPI-----------------------NPWNKTRNTIREFNSAHWDPKDPEFGQFGEPLDAHKSFDIPLWEVGFYPT--

Query:  -------------IRLMGGHCLFSS-FGITSIMVKTICASCMWLEDWEFSYESNIANDKIHEAVEAWKFIKKMKSLRHCE--------------------
                     + L GG   +S    +     K        LEDWEFSYESNIAN+KIHEAVEAWKF+KKMKSLRHCE                    
Subjt:  -------------IRLMGGHCLFSS-FGITSIMVKTICASCMWLEDWEFSYESNIANDKIHEAVEAWKFIKKMKSLRHCE--------------------

Query:  ---------ELKKYHDKEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDESKRKRLELEGKR-FLNTEAIQ
                 ELKKYHDKEKELKRLREMNCV+ATENEKLREEVKKWVQQAVNTQRDLDE+KRK LELE +   LNTEAIQ
Subjt:  ---------ELKKYHDKEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDESKRKRLELEGKR-FLNTEAIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGACTTTCAGATCACTAAATCATTGTCGAATCCAAGGTAAAGGAAAATTCTTCAGCTGTGCTCCAATCAATCCATGGAATAAGACAAGAAACACTATCAGAGA
ATTCAATAGTGCACACTGGGATCCAAAGGATCCAGAATTTGGGCAATTTGGAGAGCCCTTGGATGCCCACAAGTCCTTTGACATACCGTTGTGGGAAGTTGGCTTTTATC
CCACTATTAGGCTTATGGGGGGGCATTGCTTATTCTCCTCTTTTGGTATTACGTCAATCATGGTCAAAACAATTTGCGCCAGTTGTATGTGGTTAGAAGATTGGGAATTC
TCATATGAGTCCAACATAGCAAATGATAAAATTCACGAAGCAGTCGAGGCATGGAAATTTATAAAGAAGATGAAAAGTTTGCGACATTGTGAGGAATTGAAGAAATATCA
TGATAAAGAAAAGGAATTAAAGCGATTAAGAGAAATGAATTGTGTTTTGGCAACAGAGAACGAAAAGTTAAGAGAAGAAGTCAAGAAATGGGTCCAGCAAGCTGTTAATA
CTCAAAGAGATTTAGACGAGTCGAAGCGAAAGCGATTGGAGTTGGAAGGAAAACGATTCTTAAACACTGAGGCAATCCAAGACGAGTACGAGACATTGAGACGAAAGTAT
GATGATGCTATAGGTCGGATGGAACGAGGGGCTGAAAAATTAAGACAAATGGCGAGGGTGGCAGATCAATTCTCAGTGCAAGCTAGGACTCTCCGGCAAGGTGTTATACC
TACCCGCGACACCGATAAAGATTGTCTCATTTCTAGGAATCATAGGACAGTGCCTCGGACGTTTGGGTGCTACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGACTTTCAGATCACTAAATCATTGTCGAATCCAAGGTAAAGGAAAATTCTTCAGCTGTGCTCCAATCAATCCATGGAATAAGACAAGAAACACTATCAGAGA
ATTCAATAGTGCACACTGGGATCCAAAGGATCCAGAATTTGGGCAATTTGGAGAGCCCTTGGATGCCCACAAGTCCTTTGACATACCGTTGTGGGAAGTTGGCTTTTATC
CCACTATTAGGCTTATGGGGGGGCATTGCTTATTCTCCTCTTTTGGTATTACGTCAATCATGGTCAAAACAATTTGCGCCAGTTGTATGTGGTTAGAAGATTGGGAATTC
TCATATGAGTCCAACATAGCAAATGATAAAATTCACGAAGCAGTCGAGGCATGGAAATTTATAAAGAAGATGAAAAGTTTGCGACATTGTGAGGAATTGAAGAAATATCA
TGATAAAGAAAAGGAATTAAAGCGATTAAGAGAAATGAATTGTGTTTTGGCAACAGAGAACGAAAAGTTAAGAGAAGAAGTCAAGAAATGGGTCCAGCAAGCTGTTAATA
CTCAAAGAGATTTAGACGAGTCGAAGCGAAAGCGATTGGAGTTGGAAGGAAAACGATTCTTAAACACTGAGGCAATCCAAGACGAGTACGAGACATTGAGACGAAAGTAT
GATGATGCTATAGGTCGGATGGAACGAGGGGCTGAAAAATTAAGACAAATGGCGAGGGTGGCAGATCAATTCTCAGTGCAAGCTAGGACTCTCCGGCAAGGTGTTATACC
TACCCGCGACACCGATAAAGATTGTCTCATTTCTAGGAATCATAGGACAGTGCCTCGGACGTTTGGGTGCTACCATTAG
Protein sequenceShow/hide protein sequence
MAETFRSLNHCRIQGKGKFFSCAPINPWNKTRNTIREFNSAHWDPKDPEFGQFGEPLDAHKSFDIPLWEVGFYPTIRLMGGHCLFSSFGITSIMVKTICASCMWLEDWEF
SYESNIANDKIHEAVEAWKFIKKMKSLRHCEELKKYHDKEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDESKRKRLELEGKRFLNTEAIQDEYETLRRKY
DDAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTDKDCLISRNHRTVPRTFGCYH