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IVF0024378 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024378
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S ribosomal protein L44
Genome locationchr04:22603520..22604466
RNA-Seq ExpressionIVF0024378
SyntenyIVF0024378
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR040411 - Uncharacterized protein At5g23160-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052773.1 60S ribosomal protein L44 [Cucumis melo var. makuwa]1.08e-162100Show/hide
Query:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSG
        MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSG
Subjt:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSG

Query:  YESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMVVMVAI
        YESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMVVMVAI
Subjt:  YESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMVVMVAI

Query:  MVLWGRLCAILCTTALFYLGRRMRSEMEVGGGGGRGGFGGNS
        MVLWGRLCAILCTTALFYLGRRMRSEMEVGGGGGRGGFGGNS
Subjt:  MVLWGRLCAILCTTALFYLGRRMRSEMEVGGGGGRGGFGGNS

KAG6606901.1 60S ribosomal protein L44, partial [Cucurbita argyrosperma subsp. sororia]1.21e-5652.94Show/hide
Query:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPS-----HDELSFSPDFKKPPPLSLITPKAPQVVGEI
        MA++S+K  PSK P  FL  CF SS K+  KK  +    + R  S  FRFKKSSATVP+DVA P       D+ SFSP+FKKPPP  LI  +AP V  +I
Subjt:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPS-----HDELSFSPDFKKPPPLSLITPKAPQVVGEI

Query:  VVDSGYESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMV
        V     E +KPSQT KK EST+ +     L+P ++ AA LHS+S PS+ L RQKD K++VS HL +AV T +P  S+  KP  K   N P K LD +I++
Subjt:  VVDSGYESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMV

Query:  VMVAIMVLWGRLCAILCTTALFYLGRRMRSEMEVGGGG
        V VAI+VLWG+LCAILCTTALFY  RR+RSE E  GGG
Subjt:  VMVAIMVLWGRLCAILCTTALFYLGRRMRSEMEVGGGG

KGN58547.1 hypothetical protein Csa_002056 [Cucumis sativus]1.12e-12082.3Show/hide
Query:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSG
        MADSS+  PPSKSP  FLF+CFRSSSKLP KK SSIAPR RRT S TFRFKKSSATVPVDVA PSHDELSF P+FKK PPLS I PKAPQV GEIVVDS 
Subjt:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSG

Query:  YESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMVVMVAI
          SLKPSQTRKKP STQSNFTTKKLSPTRK AA LHSVS PSQ LTRQK FK+ VS HLPAAVATTSPAFSDGNKPTPKL T YPVKN DRVIMVV+VAI
Subjt:  YESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMVVMVAI

Query:  MVLWGRLCAILCTTALFYLGRRMRSEMEV-GGGGGRGGFGGNS
        ++LWGRLCAILCTTALFYLGRRMRSE+E  GGG GRG   GNS
Subjt:  MVLWGRLCAILCTTALFYLGRRMRSEMEV-GGGGGRGGFGGNS

XP_022949237.1 uncharacterized protein LOC111452650 [Cucurbita moschata]2.04e-6154.2Show/hide
Query:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPS-----HDELSFSPDFKKPPPLSLITPKAPQVVGEI
        MA++S+K  PSK P  FL  CF SS K+  KK  +   R+ R  S  FRFKKSSATVP+DVA P       D+ SFSP+FKKPPP  LI  +AP V  +I
Subjt:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPS-----HDELSFSPDFKKPPPLSLITPKAPQVVGEI

Query:  VVDSGYESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMV
        V     E +KPSQ  KK EST+S+F    L+P ++ AA LHS+S PS+ L RQKDFK++VS HL +AV T +P  S+  KP  K   N P K LD +I++
Subjt:  VVDSGYESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMV

Query:  VMVAIMVLWGRLCAILCTTALFYLGRRMRSEMEVGGGG
        V VAI+VLWG+LCAILCTTALFY  RR+RSE E+ GGG
Subjt:  VMVAIMVLWGRLCAILCTTALFYLGRRMRSEMEVGGGG

XP_022982640.1 uncharacterized protein LOC111481455 [Cucurbita maxima]5.89e-5652.4Show/hide
Query:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSG
        MA+SS K         FLF CFRSS  +  +K   IA  NRRT SL FRFKK SATVP+D A P HDELSFSP+F  PPP S I        GEI+VDSG
Subjt:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSG

Query:  YESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMVVMVAI
         +++K S+TRKK ESTQSN T +KL P +K + SLHS          +K  K+S+S HLP AVA   P  S  +  + K  TN P    D V ++V VAI
Subjt:  YESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMVVMVAI

Query:  MVLWGRLCAILCTTALFYLGRRMRSEMEV
        +VLWGRLCAILCT ALFYL R +RS+ E+
Subjt:  MVLWGRLCAILCTTALFYLGRRMRSEMEV

TrEMBL top hitse value%identityAlignment
A0A0A0LCZ2 Uncharacterized protein4.5e-9582.3Show/hide
Query:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSG
        MADSS+  PPSKSP  FLF+CFRSSSKLP KK SSIAPR RRT S TFRFKKSSATVPVDVA PSHDELSF P+FKK PPLS I PKAPQV GEIVVDS 
Subjt:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSG

Query:  YESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMVVMVAI
          SLKPSQTRKKP STQSNFTTKKLSPTRK AA LHSVS PSQ LTRQK FK+ VS HLPAAVATTSPAFSDGNKPTPKL T YPVKN DRVIMVV+VAI
Subjt:  YESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMVVMVAI

Query:  MVLWGRLCAILCTTALFYLGRRMRSEMEV-GGGGGRGGFGGNS
        ++LWGRLCAILCTTALFYLGRRMRSE+E  GGG GRG   GNS
Subjt:  MVLWGRLCAILCTTALFYLGRRMRSEMEV-GGGGGRGGFGGNS

A0A5A7UA28 60S ribosomal protein L444.5e-127100Show/hide
Query:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSG
        MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSG
Subjt:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSG

Query:  YESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMVVMVAI
        YESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMVVMVAI
Subjt:  YESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMVVMVAI

Query:  MVLWGRLCAILCTTALFYLGRRMRSEMEVGGGGGRGGFGGNS
        MVLWGRLCAILCTTALFYLGRRMRSEMEVGGGGGRGGFGGNS
Subjt:  MVLWGRLCAILCTTALFYLGRRMRSEMEVGGGGGRGGFGGNS

A0A6J1F3C2 uncharacterized protein LOC1114417601.3e-4151.22Show/hide
Query:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSG
        MA+SS      K    FLF CFRSS  +  +K   IA  NRRT SL FRFKKSSATVP+D A P HDELS SP+F  PPP        P + GEI+VDSG
Subjt:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSG

Query:  YESLKPSQTRKKPESTQSN----FTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVA--TTSPAFSDGNKPTPKLATNYPVKNLDRVIM
         +++KPS+TRKK ESTQSN     T    +  +K + SLHS          +K  K+S+S HLP A A  TTS   SD  KP     TN P K  D VI+
Subjt:  YESLKPSQTRKKPESTQSN----FTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVA--TTSPAFSDGNKPTPKLATNYPVKNLDRVIM

Query:  VVMVAIMVLWGRLCAILCTTALFYLGRRMRSEME----VGGGGGRG
        +V VAI+VLWGRLCAILCT ALFYL R +RS+ E    + GGG  G
Subjt:  VVMVAIMVLWGRLCAILCTTALFYLGRRMRSEME----VGGGGGRG

A0A6J1GBH7 uncharacterized protein LOC1114526507.6e-5054.2Show/hide
Query:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPS-----HDELSFSPDFKKPPPLSLITPKAPQVVGEI
        MA++S+K  PSK P  FL  CF SS K+  KK  +   R+ R  S  FRFKKSSATVP+DVA P       D+ SFSP+FKKPPP  LI  +AP V  +I
Subjt:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPS-----HDELSFSPDFKKPPPLSLITPKAPQVVGEI

Query:  VVDSGYESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMV
        V     E +KPSQ  KK EST+S+F    L+P ++ AA LHS+S PS+ L RQKDFK++VS HL +AV T +P  S+  KP  K   N P K LD +I++
Subjt:  VVDSGYESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMV

Query:  VMVAIMVLWGRLCAILCTTALFYLGRRMRSEMEVGGGG
        V VAI+VLWG+LCAILCTTALFY  RR+RSE E+ GGG
Subjt:  VMVAIMVLWGRLCAILCTTALFYLGRRMRSEMEVGGGG

A0A6J1IZW6 uncharacterized protein LOC1114814555.6e-4551.67Show/hide
Query:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSG
        MA+SS      K    FLF CFRSS  +  +K   IA  NRRT SL FRFKK SATVP+D A P HDELSFSP+F  PPP S        + GEI+VDSG
Subjt:  MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSG

Query:  YESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMVVMVAI
         +++K S+TRKK ESTQSN T +KL P +K + SLHS          +K  K+S+S HLP AVA   P  S  +  + K  TN P    D V ++V VAI
Subjt:  YESLKPSQTRKKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMVVMVAI

Query:  MVLWGRLCAILCTTALFYLGRRMRSEME----VGGGGGRG
        +VLWGRLCAILCT ALFYL R +RS+ E    V GGG  G
Subjt:  MVLWGRLCAILCTTALFYLGRRMRSEME----VGGGGGRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATTCTTCTCAAAAAAACCCTCCCTCCAAATCCCCATTCCGTTTCCTCTTCACTTGCTTCCGATCTTCCTCCAAACTTCCTGCAAAAAAGCCTTCTTCTATCGC
CCCACGCAACCGCCGGACTTTCTCACTTACTTTCCGATTCAAGAAATCCTCTGCAACTGTTCCGGTCGACGTCGCCTATCCATCTCACGATGAGCTCTCTTTTTCGCCGG
ACTTCAAGAAACCGCCTCCTCTTTCGTTGATTACGCCGAAAGCGCCACAGGTCGTAGGTGAGATCGTTGTGGATTCGGGTTATGAGTCACTTAAGCCAAGTCAAACTCGG
AAGAAGCCCGAGTCAACTCAGTCAAATTTCACGACGAAGAAACTCTCGCCGACGAGAAAAATCGCTGCGTCGTTGCACTCTGTATCTCCTCCCTCTCAGCTATTGACCCG
CCAGAAAGATTTCAAAAGATCAGTCTCTGAACATCTCCCCGCCGCCGTCGCAACCACCTCCCCGGCGTTCTCAGACGGTAATAAACCCACCCCGAAGTTGGCGACGAATT
ATCCGGTCAAGAATTTGGATCGGGTGATTATGGTTGTTATGGTGGCTATTATGGTGCTATGGGGACGACTATGCGCCATACTGTGCACAACAGCGCTGTTCTACTTGGGA
CGTCGAATGAGATCGGAAATGGAAGTGGGCGGCGGCGGCGGCAGAGGTGGGTTTGGCGGGAATTCTTGA
mRNA sequenceShow/hide mRNA sequence
GCCCTTCTCATTTTCCTCTGCTTCATTTTCCCTCTCCCATGGCCGATTCTTCTCAAAAAAACCCTCCCTCCAAATCCCCATTCCGTTTCCTCTTCACTTGCTTCCGATCT
TCCTCCAAACTTCCTGCAAAAAAGCCTTCTTCTATCGCCCCACGCAACCGCCGGACTTTCTCACTTACTTTCCGATTCAAGAAATCCTCTGCAACTGTTCCGGTCGACGT
CGCCTATCCATCTCACGATGAGCTCTCTTTTTCGCCGGACTTCAAGAAACCGCCTCCTCTTTCGTTGATTACGCCGAAAGCGCCACAGGTCGTAGGTGAGATCGTTGTGG
ATTCGGGTTATGAGTCACTTAAGCCAAGTCAAACTCGGAAGAAGCCCGAGTCAACTCAGTCAAATTTCACGACGAAGAAACTCTCGCCGACGAGAAAAATCGCTGCGTCG
TTGCACTCTGTATCTCCTCCCTCTCAGCTATTGACCCGCCAGAAAGATTTCAAAAGATCAGTCTCTGAACATCTCCCCGCCGCCGTCGCAACCACCTCCCCGGCGTTCTC
AGACGGTAATAAACCCACCCCGAAGTTGGCGACGAATTATCCGGTCAAGAATTTGGATCGGGTGATTATGGTTGTTATGGTGGCTATTATGGTGCTATGGGGACGACTAT
GCGCCATACTGTGCACAACAGCGCTGTTCTACTTGGGACGTCGAATGAGATCGGAAATGGAAGTGGGCGGCGGCGGCGGCAGAGGTGGGTTTGGCGGGAATTCTTGAGAA
GGTTAGGGGAAAATACGTTGGTGAATTGGATATGGATAGGGTTAGGGAAAACCGCCATGCGAGAGAAAGGTTGGAGAAGAGGTTTTTGTTTTGATGAGGGAAGTAATAAT
TTGACTAATTCCTATCATACATTTACATATATGTAAACCAAAATTTGCACTCTTTAATTAAGTGCCC
Protein sequenceShow/hide protein sequence
MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVDVAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSGYESLKPSQTR
KKPESTQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLPAAVATTSPAFSDGNKPTPKLATNYPVKNLDRVIMVVMVAIMVLWGRLCAILCTTALFYLG
RRMRSEMEVGGGGGRGGFGGNS