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IVF0024385 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024385
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr06:20432564..20432731
RNA-Seq ExpressionIVF0024385
SyntenyIVF0024385
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025431.1 retrotransposon protein [Cucumis melo var. makuwa]5.53e-29100Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
        MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]8.54e-2887.27Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
        MTYC+D+DDVDEGDS YATTTASEDI YIETTNEWSQWRD+LAES+ TDWQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]8.81e-2889.09Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
        MTYC+D+DD DEGDSTYATTTASEDIQYIETTNEWSQWRDDLAES+ T+WQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
TYK04752.1 retrotransposon protein [Cucumis melo var. makuwa]5.10e-29100Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
        MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
TYK05336.1 retrotransposon protein [Cucumis melo var. makuwa]1.52e-2892.73Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
        MTYCEDVDD DEGDSTYATTTASEDIQYIETTNEWSQWRDDLAES+ TDWQLRN+
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7SMG5 Retrotransposon protein6.8e-23100Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
        MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
A0A5A7ST53 Retrotransposon protein4.9e-2192.73Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
        MTYCEDVDD DEGDSTYATTTASEDIQYIETTNEWSQWRDDLAES+ TDWQLRN+
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
A0A5A7U3B3 Retrotransposon protein2.2e-2194.55Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
        MTYCEDVDDVDEGDSTYAT TASEDIQYIETTNEWSQWRDDLAES+ TDWQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
A0A5D3C0Q5 Retrotransposon protein6.8e-23100Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
        MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
A0A5D3C4P9 Retrotransposon protein4.9e-2192.73Show/hide
Query:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
        MTYCEDVDD DEGDSTYATTTASEDIQYIETTNEWSQWRDDLAES+ TDWQLRN+
Subjt:  MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGTGAGGACGTTGACGACGTGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGCTGAATCGATATTAACCGATTGGCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGTGAGGACGTTGACGACGTGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGCTGAATCGATATTAACCGATTGGCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCEDVDDVDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAESILTDWQLRNA