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IVF0024429 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024429
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionextensin-like
Genome locationchr03:5137622..5138125
RNA-Seq ExpressionIVF0024429
SyntenyIVF0024429
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058916.1 hypothetical protein E6C27_scaffold98G00840 [Cucumis melo var. makuwa]6.50e-3752.58Show/hide
Query:  FPGREGRKQLLQISNHSRNIKKPPLPLKTAPPPLVRYKYEVEPKIIHVKTPLHFTYFVQLLTGHPNRPPPKYPCTCHQH------------PRGRLLPPP
        FP  EG K LLQISN+SRNIKKPPLP K APP +   KYE+EP+II+V+TP  F Y VQLLTG PNRPPP YPC C  H            P+G L P P
Subjt:  FPGREGRKQLLQISNHSRNIKKPPLPLKTAPPPLVRYKYEVEPKIIHVKTPLHFTYFVQLLTGHPNRPPPKYPCTCHQH------------PRGRLLPPP

Query:  --------PNHLTPSPSSHPQ-LCFPDYLEQL-TEAPALS-SYSVVN-NPPPLPPPSPPNFRVPQSPFR---SRNTEIPPSFNT---PQFYPPN
                P   TP PSS  Q     D L++L  E P LS S  V+N +P P PPPSP    VPQ  FR   S  TEIPPSF T   P F+PPN
Subjt:  --------PNHLTPSPSSHPQ-LCFPDYLEQL-TEAPALS-SYSVVN-NPPPLPPPSPPNFRVPQSPFR---SRNTEIPPSFNT---PQFYPPN

KAE8647157.1 hypothetical protein Csa_018820, partial [Cucumis sativus]9.74e-4056.85Show/hide
Query:  MSFPGREGRKQLLQISNHSRNIKKPPLPLKTAPPPLVRYKYEVEPKIIHVKTPLHFTYFVQLLTGHPNRPPPKYPCTCHQHPRGRLLPPPPNHLTPSPSS
        MS+PGREGRKQ+LQIS  S+ IKKPPL       P++RYKYE++PKII+VKT + FTY VQLLTG PN PPP YPC CHQ  R   L PPPN  TP P  
Subjt:  MSFPGREGRKQLLQISNHSRNIKKPPLPLKTAPPPLVRYKYEVEPKIIHVKTPLHFTYFVQLLTGHPNRPPPKYPCTCHQHPRGRLLPPPPNHLTPSPSS

Query:  HPQLCFPDYLEQLTEAPALSSYSVVNNPPPLPPPSPPNFRVPQSPF
                         AL  YS++N PP LPPPS PNF+VP SPF
Subjt:  HPQLCFPDYLEQLTEAPALSSYSVVNNPPPLPPPSPPNFRVPQSPF

KAG6602166.1 hypothetical protein SDJN03_07399, partial [Cucurbita argyrosperma subsp. sororia]6.24e-1558.57Show/hide
Query:  FPGREGRKQLLQISNHSRNIKKPPLPLKTAPPPLVRYKYEVEPKIIHVKTPLHFTYFVQLLTGHPNRPPP
        +P  +  +Q LQIS +SR+I KPPLP  +A P     KY+V+PKIIHVKTP  F Y VQLLTG PN PPP
Subjt:  FPGREGRKQLLQISNHSRNIKKPPLPLKTAPPPLVRYKYEVEPKIIHVKTPLHFTYFVQLLTGHPNRPPP

XP_022959600.1 extensin-like [Cucurbita moschata]9.55e-1660Show/hide
Query:  FPGREGRKQLLQISNHSRNIKKPPLPLKTAPPPLVRYKYEVEPKIIHVKTPLHFTYFVQLLTGHPNRPPP
        +P  +  +Q LQIS +SR+IKKPPLP  +A P     KY+V+PKIIHVKTP  F Y VQLLTG PN PPP
Subjt:  FPGREGRKQLLQISNHSRNIKKPPLPLKTAPPPLVRYKYEVEPKIIHVKTPLHFTYFVQLLTGHPNRPPP

XP_038885909.1 extensin-like [Benincasa hispida]1.82e-4653.59Show/hide
Query:  SFPGREGRKQLLQISNHSRNIKKPPLPLKTA----PPPLVRYKYEVEPKIIHVKTPLHFTYFVQLLTGHPNRPPPKYPCTCHQH--------PRGRLLPP
        S PG EGRK+L QISN+SR IKKPP P KTA    P P+VRY  E EPKII V+TP  F Y VQLLTG PNRPPP+YPCT + H        P+G L P 
Subjt:  SFPGREGRKQLLQISNHSRNIKKPPLPLKTA----PPPLVRYKYEVEPKIIHVKTPLHFTYFVQLLTGHPNRPPPKYPCTCHQH--------PRGRLLPP

Query:  P--------PNHLTPSPSSHP-------------QLCFPDYLEQLTEAPALSSYSVVNNPPPLPPPS--------PPNFRVPQSPFRSRNTEIPPSFNTP
        P        P+  TPSPS  P             +LC  D LE+  E  ALSSY VV++PP LPPP          PNFRVP SPFR+ NTEIPPSFNTP
Subjt:  P--------PNHLTPSPSSHP-------------QLCFPDYLEQLTEAPALSSYSVVNNPPPLPPPS--------PPNFRVPQSPFRSRNTEIPPSFNTP

Query:  Q---FYPPN
            F+PPN
Subjt:  Q---FYPPN

TrEMBL top hitse value%identityAlignment
A0A0A0KCP3 Uncharacterized protein2.9e-4059.52Show/hide
Query:  MSFPGREGRKQLLQISNHSRNIKKPPLPLKTAPPPLVRYKYEVEPKIIHVKTPLHFTYFVQLLTGHPNRPPPKYPCTCHQHPRGRLLPPPPNHLTPSPSS
        MS+PGREGRKQ+LQIS  S+ IKKPPL       P++RYKYE++PKII+VKT + FTY VQLLTG PN PPP YPC CHQ  R   L PPPN  TP    
Subjt:  MSFPGREGRKQLLQISNHSRNIKKPPLPLKTAPPPLVRYKYEVEPKIIHVKTPLHFTYFVQLLTGHPNRPPPKYPCTCHQHPRGRLLPPPPNHLTPSPSS

Query:  HPQLCFPDYLEQLTEAPALSSYSVVNNPPPLPPPSPPNFRVPQSPFRSRNTEIPPSFN-TPQFYPPNN
                        PAL  YS++ NPP LPPPS PNF+VP SPFR+ NTEIPP FN TPQFYPPN+
Subjt:  HPQLCFPDYLEQLTEAPALSSYSVVNNPPPLPPPSPPNFRVPQSPFRSRNTEIPPSFN-TPQFYPPNN

A0A5A7UXK4 Uncharacterized protein3.5e-3052.31Show/hide
Query:  FPGREGRKQLLQISNHSRNIKKPPLPLKTAPPPLVRYKYEVEPKIIHVKTPLHFTYFVQLLTGHPNRPPPKYPCTC------------HQHPRGRLLPPP
        FP  EG K LLQISN+SRNIKKPPLP K APP +   KYE+EP+II+V+TP  F Y VQLLTG PNRPPP YPC C              HP+G L P P
Subjt:  FPGREGRKQLLQISNHSRNIKKPPLPLKTAPPPLVRYKYEVEPKIIHVKTPLHFTYFVQLLTGHPNRPPPKYPCTC------------HQHPRGRLLPPP

Query:  --------PNHLTPSPSSHPQ-LCFPDYLEQL-TEAPALS-SYSVVN-NPPPLPPPSPPNFRVPQSPFR---SRNTEIPPSFNT---PQFYPPNN
                P   TP PSS  Q     D L++L  E P LS S  V+N +P P PPPSP    VPQ  FR   S  TEIPPSF T   P F+PPN+
Subjt:  --------PNHLTPSPSSHPQ-LCFPDYLEQL-TEAPALS-SYSVVN-NPPPLPPPSPPNFRVPQSPFR---SRNTEIPPSFNT---PQFYPPNN

A0A6J1H6R4 extensin-like2.2e-1141.73Show/hide
Query:  FPGREGRKQLLQISNHSRNIKKPPLPLKTAPPPLVRYKYEVEPKIIHVKTPLHFTYFVQLLTGHPNRPPPKYPCTCHQHPRGRLLPPPPNHLTPSPSSHP
        +P  +  +Q LQIS +SR+IKKPPLP  +A P     KY+V+PKIIHVKTP  F Y VQLLTG PN PPP    +    PR    PP P+ +  S  + P
Subjt:  FPGREGRKQLLQISNHSRNIKKPPLPLKTAPPPLVRYKYEVEPKIIHVKTPLHFTYFVQLLTGHPNRPPPKYPCTCHQHPRGRLLPPPPNHLTPSPSSHP

Query:  QLCFPDYLEQLTEAPALSSYSVVNNPPPLPPPSPP-NFR
                        +S Y      P  P P PP NF+
Subjt:  QLCFPDYLEQLTEAPALSSYSVVNNPPPLPPPSPP-NFR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTTCCAGGGAGGGAAGGAAGAAAACAACTCCTCCAAATCTCCAACCATTCCCGAAATATCAAGAAGCCGCCACTCCCGCTCAAAACGGCGCCGCCACCCCTCGT
AAGATACAAGTACGAGGTGGAGCCGAAGATCATTCATGTTAAAACTCCCCTACACTTCACCTACTTCGTCCAACTCCTCACTGGCCACCCCAATCGTCCCCCACCTAAAT
ACCCCTGTACTTGTCACCAACACCCACGAGGCCGCCTTCTGCCACCCCCTCCCAATCATCTTACTCCCTCCCCTTCCTCTCACCCACAACTCTGCTTTCCTGATTACCTT
GAACAATTGACAGAGGCACCGGCATTATCGTCATACTCCGTTGTTAATAATCCTCCCCCGTTGCCCCCACCTTCCCCTCCCAATTTCAGAGTTCCGCAATCGCCATTTCG
TAGCCGGAATACGGAAATTCCGCCGAGTTTCAACACTCCCCAGTTTTACCCACCCAACAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTTCCAGGGAGGGAAGGAAGAAAACAACTCCTCCAAATCTCCAACCATTCCCGAAATATCAAGAAGCCGCCACTCCCGCTCAAAACGGCGCCGCCACCCCTCGT
AAGATACAAGTACGAGGTGGAGCCGAAGATCATTCATGTTAAAACTCCCCTACACTTCACCTACTTCGTCCAACTCCTCACTGGCCACCCCAATCGTCCCCCACCTAAAT
ACCCCTGTACTTGTCACCAACACCCACGAGGCCGCCTTCTGCCACCCCCTCCCAATCATCTTACTCCCTCCCCTTCCTCTCACCCACAACTCTGCTTTCCTGATTACCTT
GAACAATTGACAGAGGCACCGGCATTATCGTCATACTCCGTTGTTAATAATCCTCCCCCGTTGCCCCCACCTTCCCCTCCCAATTTCAGAGTTCCGCAATCGCCATTTCG
TAGCCGGAATACGGAAATTCCGCCGAGTTTCAACACTCCCCAGTTTTACCCACCCAACAATTAA
Protein sequenceShow/hide protein sequence
MSFPGREGRKQLLQISNHSRNIKKPPLPLKTAPPPLVRYKYEVEPKIIHVKTPLHFTYFVQLLTGHPNRPPPKYPCTCHQHPRGRLLPPPPNHLTPSPSSHPQLCFPDYL
EQLTEAPALSSYSVVNNPPPLPPPSPPNFRVPQSPFRSRNTEIPPSFNTPQFYPPNN