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IVF0024464 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024464
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr08:13194491..13194691
RNA-Seq ExpressionIVF0024464
SyntenyIVF0024464
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033202.1 gag/pol protein [Cucumis melo var. makuwa]4.40e-25100Show/hide
Query:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIESSSDSTLNPK
        MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIESSSDSTLNPK
Subjt:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIESSSDSTLNPK

KAA0035440.1 uncharacterized protein E6C27_scaffold285G00630 [Cucumis melo var. makuwa]1.99e-1176.09Show/hide
Query:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIE
        MPSS KNALI TRC+  P  SSFNDNRY + SITSDRT EEEEKIE
Subjt:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIE

KAA0039548.1 uncharacterized protein E6C27_scaffold744G00170 [Cucumis melo var. makuwa]4.69e-1671.21Show/hide
Query:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIESSSDSTLNPKVRLRREGRKA
        MPS  KN LI T       RSSFN+NRY + SITSD T EEEEKIES  DSTLNPKVRLRREGRKA
Subjt:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIESSSDSTLNPKVRLRREGRKA

KAA0054315.1 uncharacterized protein E6C27_scaffold24G00360 [Cucumis melo var. makuwa]2.99e-1278.26Show/hide
Query:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIE
        MPSS KNALISTRC+  P  SSFNDNRY + SITSDRT EEEEKIE
Subjt:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIE

KAA0061741.1 uncharacterized protein E6C27_scaffold212G001160 [Cucumis melo var. makuwa]1.71e-1176.09Show/hide
Query:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIE
        MPSS KNALI TRC+  P  SSFNDNRY + SITSDRT EEEEKIE
Subjt:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIE

TrEMBL top hitse value%identityAlignment
A0A5A7SPT6 Gag/pol protein2.2e-20100Show/hide
Query:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIESSSDSTLNPK
        MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIESSSDSTLNPK
Subjt:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIESSSDSTLNPK

A0A5A7SWM4 Uncharacterized protein5.7e-0876.09Show/hide
Query:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIE
        MPSS KNALI TRC+  P  SSFNDNRY + SITSDRT EEEEKIE
Subjt:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIE

A0A5A7UKV8 Uncharacterized protein1.5e-0878.26Show/hide
Query:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIE
        MPSS KNALISTRC+  P  SSFNDNRY + SITSDRT EEEEKIE
Subjt:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIE

A0A5A7V7N3 Uncharacterized protein5.7e-0876.09Show/hide
Query:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIE
        MPSS KNALI TRC+  P  SSFNDNRY + SITSDRT EEEEKIE
Subjt:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIE

A0A5D3BSH6 Uncharacterized protein1.9e-1171.21Show/hide
Query:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIESSSDSTLNPKVRLRREGRKA
        MPS  KN LI T       RSSFN+NRY + SITSD T EEEEKIES  DSTLNPKVRLRREGRKA
Subjt:  MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIESSSDSTLNPKVRLRREGRKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATCATCATCGAAAAATGCTCTCATTTCGACAAGATGTAAATCTGCACCATATCGTTCGTCGTTTAACGATAACCGGTACTTGAATTTTTCGATTACAAGTGACAG
AACTGCCGAAGAGGAAGAGAAAATAGAGAGCAGTAGTGATTCGACTCTAAACCCTAAAGTGAGATTGAGAAGAGAGGGAAGAAAGGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCATCATCATCGAAAAATGCTCTCATTTCGACAAGATGTAAATCTGCACCATATCGTTCGTCGTTTAACGATAACCGGTACTTGAATTTTTCGATTACAAGTGACAG
AACTGCCGAAGAGGAAGAGAAAATAGAGAGCAGTAGTGATTCGACTCTAAACCCTAAAGTGAGATTGAGAAGAGAGGGAAGAAAGGCATGA
Protein sequenceShow/hide protein sequence
MPSSSKNALISTRCKSAPYRSSFNDNRYLNFSITSDRTAEEEEKIESSSDSTLNPKVRLRREGRKA