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IVF0024480 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024480
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr03:9730094..9730333
RNA-Seq ExpressionIVF0024480
SyntenyIVF0024480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040613.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.18e-0854.9Show/hide
Query:  MSVKGYYRCIVRRHGQHVGTKELSTFGNDVANTLLLMSSSSSVYMNHRHDV
        M  KGY RC + RHGQHV + EL    ND+AN LL  SS +S YMNHR  +
Subjt:  MSVKGYYRCIVRRHGQHVGTKELSTFGNDVANTLLLMSSSSSVYMNHRHDV
TrEMBL top hitse value%identityAlignment
A0A5A7TC06 Retrovirus-related Pol polyprotein from transposon TNT 1-942.9e-0654.9Show/hide
Query:  MSVKGYYRCIVRRHGQHVGTKELSTFGNDVANTLLLMSSSSSVYMNHRHDV
        M  KGY RC + RHGQHV + EL    ND+AN LL  SS +S YMNHR  +
Subjt:  MSVKGYYRCIVRRHGQHVGTKELSTFGNDVANTLLLMSSSSSVYMNHRHDV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAACAAACGTCGTATGAGAGTCGTCAGAGATGCATCATGAAAGGCACTCTCGACGTAAATGGGACGATGTCGGTAAAGGGTTATTACCGATGCATTGTTCGTCG
ACATGGTCAACACGTTGGCACTAAGGAACTATCGACGTTTGGTAACGACGTCGCAAATACCTTACTGCTGATGTCGTCAAGTTCATCGGTGTACATGAATCACCGACACG
ACGTCAGTACTGTTGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAACAAACGTCGTATGAGAGTCGTCAGAGATGCATCATGAAAGGCACTCTCGACGTAAATGGGACGATGTCGGTAAAGGGTTATTACCGATGCATTGTTCGTCG
ACATGGTCAACACGTTGGCACTAAGGAACTATCGACGTTTGGTAACGACGTCGCAAATACCTTACTGCTGATGTCGTCAAGTTCATCGGTGTACATGAATCACCGACACG
ACGTCAGTACTGTTGTCTGA
Protein sequenceShow/hide protein sequence
MEKQTSYESRQRCIMKGTLDVNGTMSVKGYYRCIVRRHGQHVGTKELSTFGNDVANTLLLMSSSSSVYMNHRHDVSTVV