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IVF0024493 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024493
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr12:1818263..1818707
RNA-Seq ExpressionIVF0024493
SyntenyIVF0024493
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR024766 - Zinc finger, RING-H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067739.1 RING-H2 finger protein ATL64-like [Cucumis melo var. makuwa]1.41e-5870.86Show/hide
Query:  MSSPIFLPPLLPLPPSPLPPLHSPIVLPRSIEDLLMLSMFIL----LVIAILCGKRSTKSDEEELLLENLDIQASIFSLW-------------------Q
        MSSPI LP LLPLPPSPLPPLHS IVLPRSIEDLLMLSM +L    LVIAILCG+R  KSDEEEL  +NLDIQAS+F                      +
Subjt:  MSSPIFLPPLLPLPPSPLPPLHSPIVLPRSIEDLLMLSMFIL----LVIAILCGKRSTKSDEEELLLENLDIQASIFSLW-------------------Q

Query:  KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHSF
        KCRKMKTCGH FHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAM    SF
Subjt:  KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHSF

KAA0067740.1 RING-H2 finger protein ATL63-like [Cucumis melo var. makuwa]1.21e-5972.19Show/hide
Query:  MSSPIFLPPLLPLPPSPLPPLHSPIVLPRSIEDLLMLSMFILLV----IAILCGKRSTKSDEEELLLENLDIQASIFSLW-------------------Q
        MSSPI LP LLPLP SPLPPLHSPI+LPRSIEDLLMLSMF+LLV    IAILCGKRS KSDE+EL  +NLDIQASIF                      +
Subjt:  MSSPIFLPPLLPLPPSPLPPLHSPIVLPRSIEDLLMLSMFILLV----IAILCGKRSTKSDEEELLLENLDIQASIFSLW-------------------Q

Query:  KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHSF
        KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRT VCVVVDRSEN M S  SF
Subjt:  KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHSF

XP_008457566.1 PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo]6.19e-6070.86Show/hide
Query:  MSSPIFLPPLLPLPPSPLPPLHSPIVLPRSIEDLLMLSMFILLV----IAILCGKRSTKSDEEELLLENLDIQASIFSL-------------------WQ
        MSSPI LP LLPLPPSP+PPLHSPIVLPRSIEDLLMLSM +LLV    I ILCGKRS KSDEEE L +N+DIQA IF                      +
Subjt:  MSSPIFLPPLLPLPPSPLPPLHSPIVLPRSIEDLLMLSMFILLV----IAILCGKRSTKSDEEELLLENLDIQASIFSL-------------------WQ

Query:  KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHSF
        KCRK+KTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVD SENAM S  SF
Subjt:  KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHSF

XP_008457567.1 PREDICTED: RING-H2 finger protein ATL63-like [Cucumis melo]4.91e-5971.52Show/hide
Query:  MSSPIFLPPLLPLPPSPLPPLHSPIVLPRSIEDLLMLSMFILLV----IAILCGKRSTKSDEEELLLENLDIQASIFSLW-------------------Q
        MSSPI LP LLPLPPSPLPPLHSPIVLPRSIEDLLMLSMF+LLV    IAILCGKRS KSDE+EL  +NL+IQA IF                      +
Subjt:  MSSPIFLPPLLPLPPSPLPPLHSPIVLPRSIEDLLMLSMFILLV----IAILCGKRSTKSDEEELLLENLDIQASIFSLW-------------------Q

Query:  KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHSF
        KCRKMKTCGH FHKDCIDRWFTVELHCPLCRTS CVVVDRSEN M S  SF
Subjt:  KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHSF

XP_011659858.1 E3 ubiquitin-protein ligase ATL9-like [Cucumis sativus]1.19e-3959.57Show/hide
Query:  LPLPPSPLPPLHSPIVLPRSIEDLLMLSMFILLV----IAILCGKRSTKSDEEELLLENLDIQASIFSL-------------------WQKCRKMKTCGH
        +PL PSPLPPLHSPI+LP     LL +SM +L+V    IAILC KRS KSD EEL  ENLDI+A IF                      +KCRKMKTCGH
Subjt:  LPLPPSPLPPLHSPIVLPRSIEDLLMLSMFILLV----IAILCGKRSTKSDEEELLLENLDIQASIFSL-------------------WQKCRKMKTCGH

Query:  VFHKDCIDRWFTVELHCPLCRTSVCVVV-DRSENAMTSLHS
        VFHKDCIDRWF V  HCP+CRTSVCVVV DR  NAM S  S
Subjt:  VFHKDCIDRWFTVELHCPLCRTSVCVVV-DRSENAMTSLHS

TrEMBL top hitse value%identityAlignment
A0A1S3C6H2 RING-type E3 ubiquitin transferase1.6e-4670.86Show/hide
Query:  MSSPIFLPPLLPLPPSPLPPLHSPIVLPRSIEDLLMLSMFIL----LVIAILCGKRSTKSDEEELLLENLDIQASIFSL-------------------WQ
        MSSPI LP LLPLPPSP+PPLHSPIVLPRSIEDLLMLSM +L    LVI ILCGKRS KSDEEE L +N+DIQA IF                      +
Subjt:  MSSPIFLPPLLPLPPSPLPPLHSPIVLPRSIEDLLMLSMFIL----LVIAILCGKRSTKSDEEELLLENLDIQASIFSL-------------------WQ

Query:  KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHSF
        KCRK+KTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVD SENAM S  SF
Subjt:  KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHSF

A0A1S3C741 RING-type E3 ubiquitin transferase7.8e-4671.52Show/hide
Query:  MSSPIFLPPLLPLPPSPLPPLHSPIVLPRSIEDLLMLSMFIL----LVIAILCGKRSTKSDEEELLLENLDIQASIFSL-------------------WQ
        MSSPI LP LLPLPPSPLPPLHSPIVLPRSIEDLLMLSMF+L    LVIAILCGKRS KSDE+E L +NL+IQA IF                      +
Subjt:  MSSPIFLPPLLPLPPSPLPPLHSPIVLPRSIEDLLMLSMFIL----LVIAILCGKRSTKSDEEELLLENLDIQASIFSL-------------------WQ

Query:  KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHSF
        KCRKMKTCGH FHKDCIDRWFTVELHCPLCRTS CVVVDRSEN M S  SF
Subjt:  KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHSF

A0A5A7VKL1 RING-type E3 ubiquitin transferase2.7e-4672.19Show/hide
Query:  MSSPIFLPPLLPLPPSPLPPLHSPIVLPRSIEDLLMLSMFIL----LVIAILCGKRSTKSDEEELLLENLDIQASIFSL-------------------WQ
        MSSPI LP LLPLP SPLPPLHSPI+LPRSIEDLLMLSMF+L    LVIAILCGKRS KSDE+E L +NLDIQASIF                      +
Subjt:  MSSPIFLPPLLPLPPSPLPPLHSPIVLPRSIEDLLMLSMFIL----LVIAILCGKRSTKSDEEELLLENLDIQASIFSL-------------------WQ

Query:  KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHSF
        KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRT VCVVVDRSEN M S  SF
Subjt:  KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHSF

A0A5D3BEE2 RING-type E3 ubiquitin transferase1.6e-4670.86Show/hide
Query:  MSSPIFLPPLLPLPPSPLPPLHSPIVLPRSIEDLLMLSMFIL----LVIAILCGKRSTKSDEEELLLENLDIQASIFSL-------------------WQ
        MSSPI LP LLPLPPSP+PPLHSPIVLPRSIEDLLMLSM +L    LVI ILCGKRS KSDEEE L +N+DIQA IF                      +
Subjt:  MSSPIFLPPLLPLPPSPLPPLHSPIVLPRSIEDLLMLSMFIL----LVIAILCGKRSTKSDEEELLLENLDIQASIFSL-------------------WQ

Query:  KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHSF
        KCRK+KTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVD SENAM S  SF
Subjt:  KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHSF

A0A5D3BG26 RING-type E3 ubiquitin transferase7.8e-4671.52Show/hide
Query:  MSSPIFLPPLLPLPPSPLPPLHSPIVLPRSIEDLLMLSMFIL----LVIAILCGKRSTKSDEEELLLENLDIQASIFSL-------------------WQ
        MSSPI LP LLPLPPSPLPPLHSPIVLPRSIEDLLMLSMF+L    LVIAILCGKRS KSDE+E L +NL+IQA IF                      +
Subjt:  MSSPIFLPPLLPLPPSPLPPLHSPIVLPRSIEDLLMLSMFIL----LVIAILCGKRSTKSDEEELLLENLDIQASIFSL-------------------WQ

Query:  KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHSF
        KCRKMKTCGH FHKDCIDRWFTVELHCPLCRTS CVVVDRSEN M S  SF
Subjt:  KCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHSF

SwissProt top hitse value%identityAlignment
Q9LSW9 RING-H2 finger protein ATL165.8e-0641.82Show/hide
Query:  DEEELLLENLDIQASIFSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSV
        +EEE   +   +  S F   +K R +  C H+FH DCID W     +CPLCRT V
Subjt:  DEEELLLENLDIQASIFSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSV

Q9LUZ9 RING-H2 finger protein ATL635.3e-0734.25Show/hide
Query:  KSDEEELLLENLDIQASIFSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHS
        +++EEE   E   I   ++      RK++ CGH FH +CID W +    CPLCR+ V   V   EN   ++++
Subjt:  KSDEEELLLENLDIQASIFSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHS

Q9LZJ6 RING-H2 finger protein ATL55.8e-0646.94Show/hide
Query:  LENLDIQASIFSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSV
        LE   +  S F    + R +  CGHVFH DCID WF     CPLCR  V
Subjt:  LENLDIQASIFSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSV

Q9SN27 E3 ubiquitin-protein ligase ATL597.6e-0642.86Show/hide
Query:  DIQASI----FSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSV
        D Q S+    +   +K ++M +CGH FH +CID W T    CPLCR S+
Subjt:  DIQASI----FSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSV

Q9SRM0 RING-H2 finger protein ATL667.6e-0632.84Show/hide
Query:  ILCGKRSTKSDEEELLLENLDIQASIFSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCV
        +LC +   + +EE    +   I    F   +K + +  C H +H +C+DRW   E  CPLCR S+ V
Subjt:  ILCGKRSTKSDEEELLLENLDIQASIFSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCV

Arabidopsis top hitse value%identityAlignment
AT3G11110.1 RING/U-box superfamily protein5.4e-0732.84Show/hide
Query:  ILCGKRSTKSDEEELLLENLDIQASIFSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCV
        +LC +   + +EE    +   I    F   +K + +  C H +H +C+DRW   E  CPLCR S+ V
Subjt:  ILCGKRSTKSDEEELLLENLDIQASIFSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCV

AT3G62690.1 AtL54.2e-0746.94Show/hide
Query:  LENLDIQASIFSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSV
        LE   +  S F    + R +  CGHVFH DCID WF     CPLCR  V
Subjt:  LENLDIQASIFSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSV

AT4G10160.1 RING/U-box superfamily protein5.4e-0742.86Show/hide
Query:  DIQASI----FSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSV
        D Q S+    +   +K ++M +CGH FH +CID W T    CPLCR S+
Subjt:  DIQASI----FSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSV

AT5G43420.1 RING/U-box superfamily protein4.2e-0741.82Show/hide
Query:  DEEELLLENLDIQASIFSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSV
        +EEE   +   +  S F   +K R +  C H+FH DCID W     +CPLCRT V
Subjt:  DEEELLLENLDIQASIFSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSV

AT5G58580.1 TOXICOS EN LEVADURA 633.8e-0834.25Show/hide
Query:  KSDEEELLLENLDIQASIFSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHS
        +++EEE   E   I   ++      RK++ CGH FH +CID W +    CPLCR+ V   V   EN   ++++
Subjt:  KSDEEELLLENLDIQASIFSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMTSLHS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCACCAATTTTTTTACCGCCCCTCTTACCGTTGCCACCATCGCCGTTGCCGCCGTTGCACTCACCGATCGTACTTCCTCGCTCCATCGAGGATTTGCTGATGCT
CTCCATGTTTATTCTCTTAGTCATTGCCATTTTATGTGGCAAACGGTCTACCAAATCTGACGAGGAAGAGTTGTTGTTGGAGAATCTGGACATTCAAGCATCGATTTTTT
CATTATGGCAGAAGTGTAGAAAGATGAAGACATGTGGTCACGTGTTTCATAAAGACTGCATTGATCGATGGTTTACGGTGGAGCTTCATTGTCCACTTTGTCGGACGTCG
GTTTGTGTGGTAGTTGATCGCAGTGAAAATGCGATGACTTCTCTTCATTCTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCATCACCAATTTTTTTACCGCCCCTCTTACCGTTGCCACCATCGCCGTTGCCGCCGTTGCACTCACCGATCGTACTTCCTCGCTCCATCGAGGATTTGCTGATGCT
CTCCATGTTTATTCTCTTAGTCATTGCCATTTTATGTGGCAAACGGTCTACCAAATCTGACGAGGAAGAGTTGTTGTTGGAGAATCTGGACATTCAAGCATCGATTTTTT
CATTATGGCAGAAGTGTAGAAAGATGAAGACATGTGGTCACGTGTTTCATAAAGACTGCATTGATCGATGGTTTACGGTGGAGCTTCATTGTCCACTTTGTCGGACGTCG
GTTTGTGTGGTAGTTGATCGCAGTGAAAATGCGATGACTTCTCTTCATTCTTTCTGA
Protein sequenceShow/hide protein sequence
MSSPIFLPPLLPLPPSPLPPLHSPIVLPRSIEDLLMLSMFILLVIAILCGKRSTKSDEEELLLENLDIQASIFSLWQKCRKMKTCGHVFHKDCIDRWFTVELHCPLCRTS
VCVVVDRSENAMTSLHSF