; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0024494 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024494
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr10:13260303..13261855
RNA-Seq ExpressionIVF0024494
SyntenyIVF0024494
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR005162 - Retrotransposon gag domain
IPR021109 - Aspartic peptidase domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042457.1 reverse transcriptase [Cucumis melo var. makuwa]3.67e-18263.56Show/hide
Query:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGLGNFKSQYSG-----------
        MEESR+RTT D+SWDEFK AFFDKFYP  FRDAK NEFLRL QGSMT+ EYEKKYTELSKYAT+VIEDEVERCK  EEGL    +  +            
Subjt:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGLGNFKSQYSG-----------

Query:  ---------------------------SSFSKSGLGGRAQRSSGSNHPISSTAGSHIARSDRVLSKSGKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTT
                                   SS  ++  G  AQRSSGS+HPISST GSHIARSDRV+S+SGKSSVCYNC Q GHYRRDCPHLIPGGNTILKTT
Subjt:  ---------------------------SSFSKSGLGGRAQRSSGSNHPISSTAGSHIARSDRVLSKSGKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTT

Query:  SQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCAMTQQEAADAPNVVTSTLSIFNKSAHVLMDPGPTHCFLSIMFTVGVDKELESLTEELLISTLV
        S TVSQQ RTTRTSGEGSSG KQ G VGRSR EGKV AMTQQEAADAPNVV                                                +
Subjt:  SQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCAMTQQEAADAPNVVTSTLSIFNKSAHVLMDPGPTHCFLSIMFTVGVDKELESLTEELLISTLV

Query:  GDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHRKEIVFKRPRKSEIIFHGDRKILPTYVISTLKASKLLRKGCTAYLAN
        GDSFIVNSVYRKCS+LID ETLEVDLI LNIQEFDVILGMDFLSNHYASLNCH+KEIVFKRP K                            GCTAYLAN
Subjt:  GDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHRKEIVFKRPRKSEIIFHGDRKILPTYVISTLKASKLLRKGCTAYLAN

Query:  VMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIEFSIDLVLGMAPISQARYRMAPMELRELKSQLQELVDKSFIRPSAS
        V+DTQ+SKLKLEDI VVREFPDVFP+ELSG+ PDREIEFSIDLV G APISQA Y MA MELRELKSQ+QELVDK FIRPSAS
Subjt:  VMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIEFSIDLVLGMAPISQARYRMAPMELRELKSQLQELVDKSFIRPSAS

KAA0060484.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]9.24e-22670.45Show/hide
Query:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGL--------------------
        MEESR+RTT DISW+EFK AFFDKFYPRSFRDAK NEFLRLTQGSMTIAEYEKKYTELS YAT+VIEDEVERCK  EEGL                    
Subjt:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGL--------------------

Query:  ---------------------------------------------------GNFKSQYSGSSFSKSGLGGRAQRSSGSNHPISSTAGSHIARSDRVLSKS
                                                           GNFKSQY+GSSFSKSG  G AQRSSGS+HPISST GSHIARSDRV+S+S
Subjt:  ---------------------------------------------------GNFKSQYSGSSFSKSGLGGRAQRSSGSNHPISSTAGSHIARSDRVLSKS

Query:  GKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTTSQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCAMTQQEAADAPNVVTSTLSIFNKSAHVLMD
         KSSVCYNCGQ GHYRRDCPHLIPGGNTILKTTSQTVSQQ R T TSGEGSSG KQ G VGRSRQEGKV AMTQQEAADAPNVVT               
Subjt:  GKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTTSQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCAMTQQEAADAPNVVTSTLSIFNKSAHVLMD

Query:  PGPTHCFLSIMFTVGVDKELESLTEELLISTLVGDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHRKEIVFKRPRKSEI
                     VG+DKELESLTEELLIST +GDSFIVNSVYRKCSILID ETLEVDL PLNIQEFDVILGMDFLSNHYASLNCH+KEIVFKRP  SEI
Subjt:  PGPTHCFLSIMFTVGVDKELESLTEELLISTLVGDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHRKEIVFKRPRKSEI

Query:  IFHGDRKILPTYVISTLKASKLLRKGCTAYLANVMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIEFSIDLVLGMAPISQARYRMAPMELRELKS
        +F GDRKIL T VIS LKASKLLRKGCT YL NV+DTQ+SKLKLEDIPVVREFPDVFPEELS + PDREIEFSIDLV G  PISQA YRMAPMELRELKS
Subjt:  IFHGDRKILPTYVISTLKASKLLRKGCTAYLANVMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIEFSIDLVLGMAPISQARYRMAPMELRELKS

Query:  QLQELVDKSFI
        QLQELVD  FI
Subjt:  QLQELVDKSFI

KAA0067055.1 reverse transcriptase [Cucumis melo var. makuwa]1.69e-28693.5Show/hide
Query:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGLGNFKSQYSGSSFSKSGLGGR
        MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGLGNFKSQYSGSSFSKSGLGGR
Subjt:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGLGNFKSQYSGSSFSKSGLGGR

Query:  AQRSSGSNHPISSTAGSHIARSDRVLSKSGKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTTSQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCA
        AQRSSGSNHPISSTAGSHIARSDRVLSKSGKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTTSQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCA
Subjt:  AQRSSGSNHPISSTAGSHIARSDRVLSKSGKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTTSQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCA

Query:  MTQQEAADAPNVVTSTLSIFNKSAHVLMDPGPTHCFLSIMFTVGVDKELESLTEELLISTLVGDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVIL
        MTQQEAADAPNVVT                            +GVDKELESLTEELLISTLVGDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVIL
Subjt:  MTQQEAADAPNVVTSTLSIFNKSAHVLMDPGPTHCFLSIMFTVGVDKELESLTEELLISTLVGDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVIL

Query:  GMDFLSNHYASLNCHRKEIVFKRPRKSEIIFHGDRKILPTYVISTLKASKLLRKGCTAYLANVMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIE
        GMDFLSNHYASLNCHRKEIVFKRPRKSEIIFHGDRKILPTYVISTLKASKLLRKGCTAYLANVMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIE
Subjt:  GMDFLSNHYASLNCHRKEIVFKRPRKSEIIFHGDRKILPTYVISTLKASKLLRKGCTAYLANVMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIE

Query:  FSIDLVLGMAPISQARYRMAPMELRELKSQLQELVDKSFIRPSASP
        FSIDLVLGMAPISQARYRMAPMELRELKSQLQELVDKSFIRPSASP
Subjt:  FSIDLVLGMAPISQARYRMAPMELRELKSQLQELVDKSFIRPSASP

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]2.76e-20165.18Show/hide
Query:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGL--------------------
        MEESR+RTT D+SWDEFK AFFDKFYPRSFRDAKHNEF+RLTQG+MT+AEYEKKYTELSKYAT+VI DE ERCK  EEGL                    
Subjt:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGL--------------------

Query:  ---------------------------------------------------GNFKSQYSGSSFSKSGLGGRAQRSSGSNHPISSTAGSHIARSDRVLSKS
                                                           G+FKSQYSGSSFSKS  GG AQRSS S+H ISST GSH+ARS+RV+S+S
Subjt:  ---------------------------------------------------GNFKSQYSGSSFSKSGLGGRAQRSSGSNHPISSTAGSHIARSDRVLSKS

Query:  GKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTTSQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCAMTQQEAADAPNVVTSTLSIFNKSAHVLMD
        GKSSVCYNC QLGHYRRDCPHLIPG NTILKTTSQTV QQLRTT TSGEGSSG KQ GLVGRSRQEGKV AMTQQEAADAPN+VT T SIFN+SAHVLMD
Subjt:  GKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTTSQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCAMTQQEAADAPNVVTSTLSIFNKSAHVLMD

Query:  PGPTHCFLSIMFTVGVDKELESLTEELLISTLVGDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHRKEIVFKRPRKSEI
        P                                GDSFIVNSVYRKCSILID ETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCH+KEIVFKRPRKSEI
Subjt:  PGPTHCFLSIMFTVGVDKELESLTEELLISTLVGDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHRKEIVFKRPRKSEI

Query:  IFHGDRKILPTYVISTLKASKLLRKGCTAYLANVMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIEFSIDLVLGMAPISQARYRMAPMELRELKS
        IF G+RKILPTYVIS LKASKLLRKGCTAYLA+VMDTQISKL LEDIPV R                              PISQA YRM  MELRELKS
Subjt:  IFHGDRKILPTYVISTLKASKLLRKGCTAYLANVMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIEFSIDLVLGMAPISQARYRMAPMELRELKS

Query:  QLQELVDKSFIRPSASP
        QLQELVDK FIRPSASP
Subjt:  QLQELVDKSFIRPSASP

TYK22919.1 reverse transcriptase [Cucumis melo var. makuwa]5.20e-18263.56Show/hide
Query:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGLGNFKSQYSG-----------
        MEESR+RTT D+SWDEFK AFFDKFYP  FRDAK NEFLRL QGSMT+ EYEKKYTELSKYAT+VIEDEVERCK  EEGL    +  +            
Subjt:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGLGNFKSQYSG-----------

Query:  ---------------------------SSFSKSGLGGRAQRSSGSNHPISSTAGSHIARSDRVLSKSGKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTT
                                   SS  ++  G  AQRSSGS+HPISST GSHIARSDRV+S+SGKSSVCYNC Q GHYRRDCPHLIPGGNTILKTT
Subjt:  ---------------------------SSFSKSGLGGRAQRSSGSNHPISSTAGSHIARSDRVLSKSGKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTT

Query:  SQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCAMTQQEAADAPNVVTSTLSIFNKSAHVLMDPGPTHCFLSIMFTVGVDKELESLTEELLISTLV
        S TVSQQ RTTRTSGEGSSG KQ G VGRSR EGKV AMTQQEAADAPNVV                                                +
Subjt:  SQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCAMTQQEAADAPNVVTSTLSIFNKSAHVLMDPGPTHCFLSIMFTVGVDKELESLTEELLISTLV

Query:  GDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHRKEIVFKRPRKSEIIFHGDRKILPTYVISTLKASKLLRKGCTAYLAN
        GDSFIVNSVYRKCS+LID ETLEVDLI LNIQEFDVILGMDFLSNHYASLNCH+KEIVFKRP K                            GCTAYLAN
Subjt:  GDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHRKEIVFKRPRKSEIIFHGDRKILPTYVISTLKASKLLRKGCTAYLAN

Query:  VMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIEFSIDLVLGMAPISQARYRMAPMELRELKSQLQELVDKSFIRPSAS
        V+DTQ+SKLKLEDI VVREFPDVFP+ELSG+ PDREIEFSIDLV G APISQA Y MA MELRELKSQ+QELVDK FIRPSAS
Subjt:  VMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIEFSIDLVLGMAPISQARYRMAPMELRELKSQLQELVDKSFIRPSAS

TrEMBL top hitse value%identityAlignment
A0A5A7TL70 Reverse transcriptase1.9e-14763.56Show/hide
Query:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGLGNFKSQYS------------
        MEESR+RTT D+SWDEFK AFFDKFYP  FRDAK NEFLRL QGSMT+ EYEKKYTELSKYAT+VIEDEVERCK  EEGL    +  +            
Subjt:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGLGNFKSQYS------------

Query:  --------------------------GSSFSKSGLGGRAQRSSGSNHPISSTAGSHIARSDRVLSKSGKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTT
                                   SS  ++  G  AQRSSGS+HPISST GSHIARSDRV+S+SGKSSVCYNC Q GHYRRDCPHLIPGGNTILKTT
Subjt:  --------------------------GSSFSKSGLGGRAQRSSGSNHPISSTAGSHIARSDRVLSKSGKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTT

Query:  SQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCAMTQQEAADAPNVVTSTLSIFNKSAHVLMDPGPTHCFLSIMFTVGVDKELESLTEELLISTLV
        S TVSQQ RTTRTSGEGSSG KQ G VGRSR EGKV AMTQQEAADAPNVV                                                +
Subjt:  SQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCAMTQQEAADAPNVVTSTLSIFNKSAHVLMDPGPTHCFLSIMFTVGVDKELESLTEELLISTLV

Query:  GDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHRKEIVFKRPRKSEIIFHGDRKILPTYVISTLKASKLLRKGCTAYLAN
        GDSFIVNSVYRKCS+LID ETLEVDLI LNIQEFDVILGMDFLSNHYASLNCH+KEIVFKRP                             KGCTAYLAN
Subjt:  GDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHRKEIVFKRPRKSEIIFHGDRKILPTYVISTLKASKLLRKGCTAYLAN

Query:  VMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIEFSIDLVLGMAPISQARYRMAPMELRELKSQLQELVDKSFIRPSAS
        V+DTQ+SKLKLEDI VVREFPDVFP+ELSG+ PDREIEFSIDLV G APISQA Y MA MELRELKSQ+QELVDK FIRPSAS
Subjt:  VMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIEFSIDLVLGMAPISQARYRMAPMELRELKSQLQELVDKSFIRPSAS

A0A5A7UZM6 Gag protease polyprotein-like protein3.8e-18070.45Show/hide
Query:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGL--------------------
        MEESR+RTT DISW+EFK AFFDKFYPRSFRDAK NEFLRLTQGSMTIAEYEKKYTELS YAT+VIEDEVERCK  EEGL                    
Subjt:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGL--------------------

Query:  ---------------------------------------------------GNFKSQYSGSSFSKSGLGGRAQRSSGSNHPISSTAGSHIARSDRVLSKS
                                                           GNFKSQY+GSSFSKSG  G AQRSSGS+HPISST GSHIARSDRV+S+S
Subjt:  ---------------------------------------------------GNFKSQYSGSSFSKSGLGGRAQRSSGSNHPISSTAGSHIARSDRVLSKS

Query:  GKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTTSQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCAMTQQEAADAPNVVTSTLSIFNKSAHVLMD
         KSSVCYNCGQ GHYRRDCPHLIPGGNTILKTTSQTVSQQ R T TSGEGSSG KQ G VGRSRQEGKV AMTQQEAADAPNVV                
Subjt:  GKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTTSQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCAMTQQEAADAPNVVTSTLSIFNKSAHVLMD

Query:  PGPTHCFLSIMFTVGVDKELESLTEELLISTLVGDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHRKEIVFKRPRKSEI
                    TVG+DKELESLTEELLIST +GDSFIVNSVYRKCSILID ETLEVDL PLNIQEFDVILGMDFLSNHYASLNCH+KEIVFKRP  SEI
Subjt:  PGPTHCFLSIMFTVGVDKELESLTEELLISTLVGDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHRKEIVFKRPRKSEI

Query:  IFHGDRKILPTYVISTLKASKLLRKGCTAYLANVMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIEFSIDLVLGMAPISQARYRMAPMELRELKS
        +F GDRKIL T VIS LKASKLLRKGCT YL NV+DTQ+SKLKLEDIPVVREFPDVFPEELS + PDREIEFSIDLV G  PISQA YRMAPMELRELKS
Subjt:  IFHGDRKILPTYVISTLKASKLLRKGCTAYLANVMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIEFSIDLVLGMAPISQARYRMAPMELRELKS

Query:  QLQELVDKSFI
        QLQELVD  FI
Subjt:  QLQELVDKSFI

A0A5D3BB91 Reverse transcriptase2.9e-16465.18Show/hide
Query:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGL--------------------
        MEESR+RTT D+SWDEFK AFFDKFYPRSFRDAKHNEF+RLTQG+MT+AEYEKKYTELSKYAT+VI DE ERCK  EEGL                    
Subjt:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGL--------------------

Query:  ---------------------------------------------------GNFKSQYSGSSFSKSGLGGRAQRSSGSNHPISSTAGSHIARSDRVLSKS
                                                           G+FKSQYSGSSFSKS  GG AQRSS S+H ISST GSH+ARS+RV+S+S
Subjt:  ---------------------------------------------------GNFKSQYSGSSFSKSGLGGRAQRSSGSNHPISSTAGSHIARSDRVLSKS

Query:  GKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTTSQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCAMTQQEAADAPNVVTSTLSIFNKSAHVLMD
        GKSSVCYNC QLGHYRRDCPHLIPG NTILKTTSQTV QQLRTT TSGEGSSG KQ GLVGRSRQEGKV AMTQQEAADAPN+VT T SIFN+SAHVLMD
Subjt:  GKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTTSQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCAMTQQEAADAPNVVTSTLSIFNKSAHVLMD

Query:  PGPTHCFLSIMFTVGVDKELESLTEELLISTLVGDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHRKEIVFKRPRKSEI
        P                                GDSFIVNSVYRKCSILID ETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCH+KEIVFKRPRKSEI
Subjt:  PGPTHCFLSIMFTVGVDKELESLTEELLISTLVGDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHRKEIVFKRPRKSEI

Query:  IFHGDRKILPTYVISTLKASKLLRKGCTAYLANVMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIEFSIDLVLGMAPISQARYRMAPMELRELKS
        IF G+RKILPTYVIS LKASKLLRKGCTAYLA+VMDTQISKL LEDIPV R                              PISQA YRM  MELRELKS
Subjt:  IFHGDRKILPTYVISTLKASKLLRKGCTAYLANVMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIEFSIDLVLGMAPISQARYRMAPMELRELKS

Query:  QLQELVDKSFIRPSASP
        QLQELVDK FIRPSASP
Subjt:  QLQELVDKSFIRPSASP

A0A5D3DI38 Reverse transcriptase2.5e-14763.56Show/hide
Query:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGLGNFKSQYS------------
        MEESR+RTT D+SWDEFK AFFDKFYP  FRDAK NEFLRL QGSMT+ EYEKKYTELSKYAT+VIEDEVERCK  EEGL    +  +            
Subjt:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGLGNFKSQYS------------

Query:  --------------------------GSSFSKSGLGGRAQRSSGSNHPISSTAGSHIARSDRVLSKSGKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTT
                                   SS  ++  G  AQRSSGS+HPISST GSHIARSDRV+S+SGKSSVCYNC Q GHYRRDCPHLIPGGNTILKTT
Subjt:  --------------------------GSSFSKSGLGGRAQRSSGSNHPISSTAGSHIARSDRVLSKSGKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTT

Query:  SQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCAMTQQEAADAPNVVTSTLSIFNKSAHVLMDPGPTHCFLSIMFTVGVDKELESLTEELLISTLV
        S TVSQQ RTTRTSGEGSSG KQ G VGRSR EGKV AMTQQEAADAPNVV                                                +
Subjt:  SQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCAMTQQEAADAPNVVTSTLSIFNKSAHVLMDPGPTHCFLSIMFTVGVDKELESLTEELLISTLV

Query:  GDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHRKEIVFKRPRKSEIIFHGDRKILPTYVISTLKASKLLRKGCTAYLAN
        GDSFIVNSVYRKCS+LID ETLEVDLI LNIQEFDVILGMDFLSNHYASLNCH+KEIVFKRP                             KGCTAYLAN
Subjt:  GDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHRKEIVFKRPRKSEIIFHGDRKILPTYVISTLKASKLLRKGCTAYLAN

Query:  VMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIEFSIDLVLGMAPISQARYRMAPMELRELKSQLQELVDKSFIRPSAS
        V+DTQ+SKLKLEDI VVREFPDVFP+ELSG+ PDREIEFSIDLV G APISQA Y MA MELRELKSQ+QELVDK FIRPSAS
Subjt:  VMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIEFSIDLVLGMAPISQARYRMAPMELRELKSQLQELVDKSFIRPSAS

A0A5D3DS52 Reverse transcriptase2.0e-22693.5Show/hide
Query:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGLGNFKSQYSGSSFSKSGLGGR
        MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGLGNFKSQYSGSSFSKSGLGGR
Subjt:  MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGLGNFKSQYSGSSFSKSGLGGR

Query:  AQRSSGSNHPISSTAGSHIARSDRVLSKSGKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTTSQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCA
        AQRSSGSNHPISSTAGSHIARSDRVLSKSGKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTTSQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCA
Subjt:  AQRSSGSNHPISSTAGSHIARSDRVLSKSGKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTTSQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCA

Query:  MTQQEAADAPNVVTSTLSIFNKSAHVLMDPGPTHCFLSIMFTVGVDKELESLTEELLISTLVGDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVIL
        MTQQEAADAPNVV                            T+GVDKELESLTEELLISTLVGDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVIL
Subjt:  MTQQEAADAPNVVTSTLSIFNKSAHVLMDPGPTHCFLSIMFTVGVDKELESLTEELLISTLVGDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVIL

Query:  GMDFLSNHYASLNCHRKEIVFKRPRKSEIIFHGDRKILPTYVISTLKASKLLRKGCTAYLANVMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIE
        GMDFLSNHYASLNCHRKEIVFKRPRKSEIIFHGDRKILPTYVISTLKASKLLRKGCTAYLANVMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIE
Subjt:  GMDFLSNHYASLNCHRKEIVFKRPRKSEIIFHGDRKILPTYVISTLKASKLLRKGCTAYLANVMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIE

Query:  FSIDLVLGMAPISQARYRMAPMELRELKSQLQELVDKSFIRPSASP
        FSIDLVLGMAPISQARYRMAPMELRELKSQLQELVDKSFIRPSASP
Subjt:  FSIDLVLGMAPISQARYRMAPMELRELKSQLQELVDKSFIRPSASP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAAGTAGACAAAGAACTACAGATGATATAAGTTGGGACGAGTTTAAAACAGCATTCTTTGATAAATTTTATCCACGCTCCTTTCGCGATGCAAAACACAATGA
GTTCTTAAGGCTCACTCAAGGGTCAATGACTATTGCAGAATATGAGAAGAAGTATACAGAATTGTCTAAGTATGCCACTAAGGTGATTGAGGATGAAGTGGAAAGATGTA
AGAGTTTGGAAGAGGGGTTAGGGAATTTTAAGTCTCAGTACAGTGGTTCTTCTTTCTCTAAATCGGGATTAGGCGGAAGAGCCCAGAGATCGAGTGGTTCTAATCATCCT
ATATCTTCTACAGCAGGTTCTCATATTGCTCGATCAGATAGGGTTTTATCAAAATCTGGCAAGAGTAGTGTATGTTATAATTGCGGTCAGCTAGGACATTATCGTAGAGA
CTGTCCACATCTGATACCAGGGGGTAATACTATCTTGAAAACCACTTCTCAGACTGTAAGCCAGCAGCTAAGAACCACGAGAACTAGTGGTGAAGGCTCTAGTGGGGAAA
AACAGAACGGACTAGTGGGTCGCTCTCGTCAGGAAGGGAAGGTTTGTGCAATGACACAACAAGAGGCAGCAGATGCACCAAACGTTGTGACTAGTACGTTATCTATATTT
AATAAATCTGCACATGTCTTAATGGATCCTGGTCCAACACATTGTTTTCTCTCTATTATGTTTACAGTTGGGGTTGATAAAGAGTTAGAAAGTCTAACTGAGGAATTGTT
GATAAGTACACTTGTAGGAGATAGTTTTATAGTCAATAGTGTGTACCGGAAATGTAGTATTCTTATCGATGATGAAACTTTAGAAGTGGATTTGATTCCGTTAAACATTC
AGGAGTTTGATGTTATCTTGGGAATGGATTTTCTATCTAATCACTATGCCTCCCTAAATTGTCATCGGAAAGAGATTGTTTTTAAACGTCCAAGGAAGAGTGAAATCATT
TTCCACGGTGATAGAAAAATACTTCCCACCTATGTGATCTCTACTTTAAAGGCCAGTAAATTGTTAAGGAAGGGTTGTACAGCTTACCTAGCAAATGTGATGGATACACA
GATTAGTAAGCTGAAGCTTGAAGATATACCAGTGGTAAGAGAATTCCCAGATGTATTTCCTGAAGAGTTATCAGGAGTATCGCCTGATAGAGAGATTGAATTCTCAATTG
ATTTAGTGCTTGGAATGGCACCCATTTCACAAGCTCGCTATAGAATGGCACCGATGGAACTGAGAGAGTTAAAGTCGCAGTTGCAGGAATTGGTGGATAAGAGCTTTATC
CGACCTAGTGCATCTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAAGTAGACAAAGAACTACAGATGATATAAGTTGGGACGAGTTTAAAACAGCATTCTTTGATAAATTTTATCCACGCTCCTTTCGCGATGCAAAACACAATGA
GTTCTTAAGGCTCACTCAAGGGTCAATGACTATTGCAGAATATGAGAAGAAGTATACAGAATTGTCTAAGTATGCCACTAAGGTGATTGAGGATGAAGTGGAAAGATGTA
AGAGTTTGGAAGAGGGGTTAGGGAATTTTAAGTCTCAGTACAGTGGTTCTTCTTTCTCTAAATCGGGATTAGGCGGAAGAGCCCAGAGATCGAGTGGTTCTAATCATCCT
ATATCTTCTACAGCAGGTTCTCATATTGCTCGATCAGATAGGGTTTTATCAAAATCTGGCAAGAGTAGTGTATGTTATAATTGCGGTCAGCTAGGACATTATCGTAGAGA
CTGTCCACATCTGATACCAGGGGGTAATACTATCTTGAAAACCACTTCTCAGACTGTAAGCCAGCAGCTAAGAACCACGAGAACTAGTGGTGAAGGCTCTAGTGGGGAAA
AACAGAACGGACTAGTGGGTCGCTCTCGTCAGGAAGGGAAGGTTTGTGCAATGACACAACAAGAGGCAGCAGATGCACCAAACGTTGTGACTAGTACGTTATCTATATTT
AATAAATCTGCACATGTCTTAATGGATCCTGGTCCAACACATTGTTTTCTCTCTATTATGTTTACAGTTGGGGTTGATAAAGAGTTAGAAAGTCTAACTGAGGAATTGTT
GATAAGTACACTTGTAGGAGATAGTTTTATAGTCAATAGTGTGTACCGGAAATGTAGTATTCTTATCGATGATGAAACTTTAGAAGTGGATTTGATTCCGTTAAACATTC
AGGAGTTTGATGTTATCTTGGGAATGGATTTTCTATCTAATCACTATGCCTCCCTAAATTGTCATCGGAAAGAGATTGTTTTTAAACGTCCAAGGAAGAGTGAAATCATT
TTCCACGGTGATAGAAAAATACTTCCCACCTATGTGATCTCTACTTTAAAGGCCAGTAAATTGTTAAGGAAGGGTTGTACAGCTTACCTAGCAAATGTGATGGATACACA
GATTAGTAAGCTGAAGCTTGAAGATATACCAGTGGTAAGAGAATTCCCAGATGTATTTCCTGAAGAGTTATCAGGAGTATCGCCTGATAGAGAGATTGAATTCTCAATTG
ATTTAGTGCTTGGAATGGCACCCATTTCACAAGCTCGCTATAGAATGGCACCGATGGAACTGAGAGAGTTAAAGTCGCAGTTGCAGGAATTGGTGGATAAGAGCTTTATC
CGACCTAGTGCATCTCCATGA
Protein sequenceShow/hide protein sequence
MEESRQRTTDDISWDEFKTAFFDKFYPRSFRDAKHNEFLRLTQGSMTIAEYEKKYTELSKYATKVIEDEVERCKSLEEGLGNFKSQYSGSSFSKSGLGGRAQRSSGSNHP
ISSTAGSHIARSDRVLSKSGKSSVCYNCGQLGHYRRDCPHLIPGGNTILKTTSQTVSQQLRTTRTSGEGSSGEKQNGLVGRSRQEGKVCAMTQQEAADAPNVVTSTLSIF
NKSAHVLMDPGPTHCFLSIMFTVGVDKELESLTEELLISTLVGDSFIVNSVYRKCSILIDDETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHRKEIVFKRPRKSEII
FHGDRKILPTYVISTLKASKLLRKGCTAYLANVMDTQISKLKLEDIPVVREFPDVFPEELSGVSPDREIEFSIDLVLGMAPISQARYRMAPMELRELKSQLQELVDKSFI
RPSASP