CuGenDBv2

Gene ID	IVF0024503
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	NAD(P)H-quinone oxidoreductase subunit J, chloroplastic
Genome location	tig00000662:103537..104013
RNA-Seq Expression	IVF0024503
Synteny	IVF0024503
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0022900 - electron transport chain (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function) GO:0048038 - quinone binding (molecular function)
InterPro domains	IPR001268 - NADH:ubiquinone oxidoreductase, 30kDa subunit IPR010218 - NADH dehydrogenase, subunit C IPR020396 - NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site IPR037232 - NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ALO21898.1 NdhJ [Cucurbita cordata]

2.66e-117

98.1

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQG+LSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYE+QDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

YP_004841786.1 NADH-plastoquinone oxidoreductase subunit J [Cucumis melo subsp. melo]

7.94e-119

100

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

YP_009004047.1 NADH-plastoquinone oxidoreductase subunit J [Cucumis hystrix]

1.87e-117

98.73

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGI YDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

YP_009236283.1 NADH-plastoquinone oxidoreductase subunit J [Gynostemma pentaphyllum]

1.32e-117

98.73

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQG+LSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

YP_009525189.1 NADH-plastoquinone oxidoreductase subunit J [Hodgsonia macrocarpa]

1.87e-117

98.73

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQG LSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

TrEMBL top hits

e value

%identity

Alignment

A0A1S4EU07 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

6.8e-92

100

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

A0A249RXS5 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

6.8e-92

100

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

A0A249RZ18 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

6.8e-92

100

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

A0A249RZ69 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

6.8e-92

100

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

A0A286NFY1 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

6.8e-92

100

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

SwissProt top hits

e value

%identity

Alignment

B1A938 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

4.7e-90

94.3

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQG+LS WLVKHGLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEEVCIKVFA R NP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADF ERESYDMLGISYDNHPRLKRILMPESW+GWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

B5LML3 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.1e-89

93.04

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQGNLS+WLVKHG+VHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEY +DQPEEVCIKVFA R NP+IPS+
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADF ERESYDMLGISYDNHPRLKRILMPESW+GWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

P31174 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

1.8e-89

91.77

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQG LSSWLVKHGL+HRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTR+EYGIDQPEEVCIK+F AR NP+IPS+
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADF E+ESYDMLGISYDNHPRL+RILMPESW+GWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

Q0ZJ17 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

2.1e-90

94.3

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQG LS+WLVKHGLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG+DQPEEVCIKVFA+R NP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADF ERESYDMLGISYDNHPRLKRILMPESW+GWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

Q4VZH2 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic

2.0e-93

98.73

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Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKSADFPERESYDMLGI YDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

Arabidopsis top hits

e value

%identity

Alignment

ATCG00420.1 NADH dehydrogenase subunit J

1.6e-85

88.61

Show/hide

Query:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV
        MQG LS WL K GLVHRSLGFDYQGIETLQIKPE+WHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYG++Q EEVCIKVF  R NP+IPSV
Subjt:  MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSV

Query:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH
        FWVWKS DF ERESYDMLGI+YD+HPRLKRILMPESW+GWPLRKDYIAPNFYEIQDA+
Subjt:  FWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

ATMG00070.1 NADH dehydrogenase subunit 9

3.3e-06

31.25

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Query:  GIDQPE-----EVCIKVFAARIN------------PKIPSVFWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQ
        G+D P      EV   + + R N             +I  V  ++ SA   ERE +DM G+S+ NHP L+RI     + G PLRKD     + +++
Subjt:  GIDQPE-----EVCIKVFAARIN------------PKIPSVFWVWKSADFPERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQ

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCAGGGTAATTTGTCTTCTTGGCTAGTCAAACATGGACTGGTTCATAGATCTTTGGGTTTCGATTACCAAGGAATAGAGACTTTACAAATAAAGCCCGAGGAATGGCA
TTCCATTGCAGTCATTTTATATGTATATGGTTACAATTATCTACGTTCCCAATGTGCTTATGATGTAGCACCAGGCGGACTGTTAGCTAGTGTGTATCATCTTACGAGAA
TCGAGTATGGTATAGATCAACCGGAAGAGGTATGCATAAAAGTATTTGCCGCAAGGATAAATCCTAAAATTCCGTCTGTTTTCTGGGTTTGGAAAAGTGCGGATTTTCCA
GAAAGGGAATCTTATGATATGTTGGGAATTTCTTATGATAATCATCCACGTCTAAAGCGTATCTTAATGCCTGAAAGTTGGGTAGGATGGCCCTTACGTAAGGATTATAT
TGCCCCCAATTTTTATGAAATACAAGATGCTCATTAA

mRNA sequence

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Protein sequence

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MQGNLSSWLVKHGLVHRSLGFDYQGIETLQIKPEEWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGIDQPEEVCIKVFAARINPKIPSVFWVWKSADFP
ERESYDMLGISYDNHPRLKRILMPESWVGWPLRKDYIAPNFYEIQDAH

IVF0024503 (gene) of Melon (IVF77) v1 genome