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IVF0024511 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024511
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr03:15807751..15808487
RNA-Seq ExpressionIVF0024511
SyntenyIVF0024511
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045262.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.25e-99100Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS
        ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS
Subjt:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS

TYK02994.1 uncharacterized protein E5676_scaffold46G00830 [Cucumis melo var. makuwa]6.18e-8074.69Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLVKL  F+PLLD+TS+LAQ S DNAD+KF P K F+I  +RSPRF ATLQLSP+WF+ +SVD+ HSSKVSLESFHDA+LDGG F+SM+IHLLDKTNQM
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS
         LRFDTPSS+IQP HHELTLSPPQ+ED QI +HELD  K+ IVKSK+LRR+IK+LPIF NDS
Subjt:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS

XP_008464344.1 PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]3.47e-109100Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS
        ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS
Subjt:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS

XP_031743957.1 uncharacterized protein LOC116404737 [Cucumis sativus]9.63e-8075.31Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLVKL  F+PLLD+T FLA  S +NA +KFTP K F+I S+R P FIATLQLSP+WFT FSVD+ HSSKVSLESFHDA+LDGG F++M+IHLLDKTNQM
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS
        ILRFDTPSS+IQPLH ELTLSPPQ+ED++IGQHEL+ +K+FIV SK+LRR+IK+LPIFQNDS
Subjt:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS

XP_031743987.1 uncharacterized protein LOC116404759 [Cucumis sativus]6.05e-10293.21Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLVKL NFDPLLDATSF AQISFD+AD+KFTPSKFFII+SHRSPRFIATLQLSPQWFT+FSVD+DHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQ+
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS
        ILRFDTPSSEIQPLHHEL LSPPQAEDNQIGQHELDE KYFIVKSKALRRIIK+LPIFQNDS
Subjt:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS

TrEMBL top hitse value%identityAlignment
A0A0A0K902 Uncharacterized protein2.8e-8093.29Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLVKL NFDPLLDATSF AQISFD+AD+KFTPSKFFII+SHRSPRFIATLQLSPQWFT+FSVD+DHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQ+
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSSN
        ILRFDTPSSEIQPLHHEL LSPPQAEDNQIGQHELDE KYFIVKSKALRRIIK+LPIFQNDSSN
Subjt:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSSN

A0A1S3C8J1 uncharacterized protein LOC1034980104.8e-4864.2Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLV+L+ F+PL+DATS LAQ++ D AD+KFTP    II S+RSP+F+ATLQLS + FT FSVD++ SSKVSL+ FHDA+LDGGSF+SMTIHLLD TNQM
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS
        +LRF+TPS ++ PLHHEL LSPPQAE+  +GQ E     +F V S+ LRRIIK+LP+F  D+
Subjt:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS

A0A1S3CL88 uncharacterized protein LOC1035022504.9e-85100Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS
        ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS
Subjt:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS

A0A5D3BV00 Uncharacterized protein2.0e-6274.69Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLVKL  F+PLLD+TS+LAQ S DNAD+KF P K F+I  +RSPRF ATLQLSP+WF+ +SVD+ HSSKVSLESFHDA+LDGG F+SM+IHLLDKTNQM
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS
         LRFDTPSS+IQP HHELTLSPPQ+ED QI +HELD  K+ IVKSK+LRR+IK+LPIF NDS
Subjt:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS

A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein4.9e-85100Show/hide
Query:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
        MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM
Subjt:  MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQM

Query:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS
        ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS
Subjt:  ILRFDTPSSEIQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGTCAAGCTTAAAAACTTCGATCCTCTTCTTGACGCAACCTCCTTTCTTGCTCAAATTTCCTTCGACAATGCTGACCTGAAATTTACGCCTTCGAAATTCTT
CATAATTGCCTCGCACCGTTCCCCTCGCTTCATCGCAACGCTACAATTGTCCCCACAATGGTTTACTACTTTTTCCGTTGATAATGATCATAGTTCTAAGGTTTCCCTTG
AATCCTTCCATGATGCTATATTGGATGGTGGAAGTTTTGCTTCAATGACAATCCATCTTTTGGACAAAACAAACCAAATGATCCTTCGATTTGATACTCCTTCAAGCGAA
ATCCAACCTTTGCATCATGAATTGACATTGTCACCTCCGCAAGCAGAAGACAATCAAATTGGCCAACATGAACTTGACGAAAGAAAATATTTCATAGTTAAATCTAAGGC
ATTAAGACGAATTATCAAAGATTTACCTATCTTCCAAAATGATTCAAGTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGGTCAAGCTTAAAAACTTCGATCCTCTTCTTGACGCAACCTCCTTTCTTGCTCAAATTTCCTTCGACAATGCTGACCTGAAATTTACGCCTTCGAAATTCTT
CATAATTGCCTCGCACCGTTCCCCTCGCTTCATCGCAACGCTACAATTGTCCCCACAATGGTTTACTACTTTTTCCGTTGATAATGATCATAGTTCTAAGGTTTCCCTTG
AATCCTTCCATGATGCTATATTGGATGGTGGAAGTTTTGCTTCAATGACAATCCATCTTTTGGACAAAACAAACCAAATGATCCTTCGATTTGATACTCCTTCAAGCGAA
ATCCAACCTTTGCATCATGAATTGACATTGTCACCTCCGCAAGCAGAAGACAATCAAATTGGCCAACATGAACTTGACGAAAGAAAATATTTCATAGTTAAATCTAAGGC
ATTAAGACGAATTATCAAAGATTTACCTATCTTCCAAAATGATTCAAGTAATTGA
Protein sequenceShow/hide protein sequence
MFLVKLKNFDPLLDATSFLAQISFDNADLKFTPSKFFIIASHRSPRFIATLQLSPQWFTTFSVDNDHSSKVSLESFHDAILDGGSFASMTIHLLDKTNQMILRFDTPSSE
IQPLHHELTLSPPQAEDNQIGQHELDERKYFIVKSKALRRIIKDLPIFQNDSSN