; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0024521 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024521
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRT_RNaseH domain-containing protein
Genome locationchr04:9783862..9784302
RNA-Seq ExpressionIVF0024521
SyntenyIVF0024521
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035429.1 uncharacterized protein E6C27_scaffold285G00480 [Cucumis melo var. makuwa]2.01e-5272.44Show/hide
Query:  MNNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWE--IEDVLVKVDKILFPADFSILDYEAGWEVPI
        +N+FE VALTQAT D FKNGVPEKMT+P SF V  + G MDLGC L DLGA INLM LSIFKK+GI E  IEDVLVKVDK LF  DF ILDY+A  +VPI
Subjt:  MNNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWE--IEDVLVKVDKILFPADFSILDYEAGWEVPI

Query:  ILRWPFLSTACALIYVHQGELTMQFND
        IL  PFLST+C LI VHQGELTM FND
Subjt:  ILRWPFLSTACALIYVHQGELTMQFND

KAA0042146.1 uncharacterized protein E6C27_scaffold67G006360 [Cucumis melo var. makuwa]6.18e-4561.43Show/hide
Query:  MNNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWE---------------------IEDVLVKVDKI
        MN+FE VALTQA CDVFKNGV EKMT P SFIVPC+IG MDLGC   +L A INL+ LSIFKKLGI E                     IE+VLVKVDK 
Subjt:  MNNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWE---------------------IEDVLVKVDKI

Query:  LFPADFSILDYEAGWEVPIILRWPFLSTACALIYVHQGEL
        LF A F ILD++A  EVPIIL WPFLS   ALI VHQG +
Subjt:  LFPADFSILDYEAGWEVPIILRWPFLSTACALIYVHQGEL

KAA0046467.1 uncharacterized protein E6C27_scaffold543G00460 [Cucumis melo var. makuwa]2.15e-5592.63Show/hide
Query:  MNNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWEIEDVLVKVDKILFPADFSILDYEAGWE
        MNNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWE       VDKILFPADFSILDYEAGWE
Subjt:  MNNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWEIEDVLVKVDKILFPADFSILDYEAGWE

KAA0062776.1 uncharacterized protein E6C27_scaffold382G001190 [Cucumis melo var. makuwa]1.92e-4458.9Show/hide
Query:  MNNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWE---------------------IEDVLVKVDKI
        MN +E V LTQAT ++FKN V +KMT P SF V C+I DMDLG TL +LGA INLM LSIFKKLG+WE                     I+DVL+KVDK 
Subjt:  MNNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWE---------------------IEDVLVKVDKI

Query:  LFPADFSILDYEAGWEVPIILRWPFLSTACALIYVHQGELTMQFND
        LF ADF ILDYEA  EVPIIL   FL T  ALI VHQ ELTM  ND
Subjt:  LFPADFSILDYEAGWEVPIILRWPFLSTACALIYVHQGELTMQFND

XP_008465121.1 PREDICTED: uncharacterized protein LOC103502805 [Cucumis melo]1.73e-4460Show/hide
Query:  NNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWE---------------------IEDVLVKVDKIL
        N+ E VALT  T D+ KNG P+KMT+  SF VPC+I +MDLG  L DLGA INLM LSIFKKL I E                     IED+LVKVDK L
Subjt:  NNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWE---------------------IEDVLVKVDKIL

Query:  FPADFSILDYEAGWEVPIILRWPFLSTACALIYVHQGELTMQFND
        F ADF ILDYEA  EVPII   PFLST  ALI VHQGELTM+FND
Subjt:  FPADFSILDYEAGWEVPIILRWPFLSTACALIYVHQGELTMQFND

TrEMBL top hitse value%identityAlignment
A0A1S3CN55 uncharacterized protein LOC1035028053.0e-3460Show/hide
Query:  NNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWE---------------------IEDVLVKVDKIL
        N+ E VALT  T D+ KNG P+KMT+  SF VPC+I +MDLG  L DLGA INLM LSIFKKL I E                     IED+LVKVDK L
Subjt:  NNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWE---------------------IEDVLVKVDKIL

Query:  FPADFSILDYEAGWEVPIILRWPFLSTACALIYVHQGELTMQFND
        F ADF ILDYEA  EVPII   PFLST  ALI VHQGELTM+FND
Subjt:  FPADFSILDYEAGWEVPIILRWPFLSTACALIYVHQGELTMQFND

A0A5A7TX29 Uncharacterized protein6.7e-4292.63Show/hide
Query:  MNNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWEIEDVLVKVDKILFPADFSILDYEAGWE
        MNNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWE       VDKILFPADFSILDYEAGWE
Subjt:  MNNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWEIEDVLVKVDKILFPADFSILDYEAGWE

A0A5A7VJ95 Uncharacterized protein3.0e-3460Show/hide
Query:  NNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWE---------------------IEDVLVKVDKIL
        N+ E VALT  T D+ KNG P+KMT+  SF VPC+I +MDLG  L DLGA INLM LSIFKKL I E                     IED+LVKVDK L
Subjt:  NNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWE---------------------IEDVLVKVDKIL

Query:  FPADFSILDYEAGWEVPIILRWPFLSTACALIYVHQGELTMQFND
        F ADF ILDYEA  EVPII   PFLST  ALI VHQGELTM+FND
Subjt:  FPADFSILDYEAGWEVPIILRWPFLSTACALIYVHQGELTMQFND

A0A5D3DPZ2 Uncharacterized protein3.7e-4072.44Show/hide
Query:  MNNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWE--IEDVLVKVDKILFPADFSILDYEAGWEVPI
        +N+FE VALTQAT D FKNGVPEKMT+P SF V  + G MDLGC L DLGA INLM LSIFKK+GI E  IEDVLVKVDK LF  DF ILDY+A  +VPI
Subjt:  MNNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWE--IEDVLVKVDKILFPADFSILDYEAGWEVPI

Query:  ILRWPFLSTACALIYVHQGELTMQFND
        IL  PFLST+C LI VHQGELTM FND
Subjt:  ILRWPFLSTACALIYVHQGELTMQFND

A0A5D3DSI6 Uncharacterized protein5.1e-3462.32Show/hide
Query:  MNNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWE---------------------IEDVLVKVDKI
        MN+FE VALTQA CDVFKNGV EKMT P SFIVPC+IG MDLGC   +L A INL+ LSIFKKLGI E                     IE+VLVKVDK 
Subjt:  MNNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWE---------------------IEDVLVKVDKI

Query:  LFPADFSILDYEAGWEVPIILRWPFLSTACALIYVHQG
        LF A F ILD++A  EVPIIL WPFLS   ALI VHQG
Subjt:  LFPADFSILDYEAGWEVPIILRWPFLSTACALIYVHQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATAATTTTGAGATTGTAGCTCTAACGCAGGCAACATGCGATGTCTTCAAGAATGGGGTACCAGAGAAGATGACAAACCCTGAAAGCTTCATTGTACCGTGCACAAT
AGGCGACATGGATCTTGGTTGCACACTAAGCGATCTAGGAGCAAGGATCAACTTAATGTCTCTCTCTATCTTCAAGAAATTAGGAATATGGGAGATCGAAGATGTACTAG
TTAAGGTGGATAAGATTTTATTCCCTGCAGACTTTAGTATTCTAGACTATGAAGCTGGTTGGGAGGTTCCTATCATTTTAAGGTGGCCATTTCTGTCAACAGCTTGTGCC
CTTATATATGTTCATCAAGGGGAATTGACCATGCAGTTTAATGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATAATTTTGAGATTGTAGCTCTAACGCAGGCAACATGCGATGTCTTCAAGAATGGGGTACCAGAGAAGATGACAAACCCTGAAAGCTTCATTGTACCGTGCACAAT
AGGCGACATGGATCTTGGTTGCACACTAAGCGATCTAGGAGCAAGGATCAACTTAATGTCTCTCTCTATCTTCAAGAAATTAGGAATATGGGAGATCGAAGATGTACTAG
TTAAGGTGGATAAGATTTTATTCCCTGCAGACTTTAGTATTCTAGACTATGAAGCTGGTTGGGAGGTTCCTATCATTTTAAGGTGGCCATTTCTGTCAACAGCTTGTGCC
CTTATATATGTTCATCAAGGGGAATTGACCATGCAGTTTAATGACTAG
Protein sequenceShow/hide protein sequence
MNNFEIVALTQATCDVFKNGVPEKMTNPESFIVPCTIGDMDLGCTLSDLGARINLMSLSIFKKLGIWEIEDVLVKVDKILFPADFSILDYEAGWEVPIILRWPFLSTACA
LIYVHQGELTMQFND