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IVF0024523 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024523
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr04:5578134..5578709
RNA-Seq ExpressionIVF0024523
SyntenyIVF0024523
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046182.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]1.88e-5376.15Show/hide
Query:  RKILRSLPKTWNAKVTAIQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNKN------------EDDLDENDIAYFSRKYKNFIKRKKYFKKHMSS
        RKIL  LPKTW+AKVTAIQEAKDLTKLP EELIGSLMTHEIIM+ HLEDESKK K+            EDDLDE+DI YFSRKYKNFIKRKK FKK++S+
Subjt:  RKILRSLPKTWNAKVTAIQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNKN------------EDDLDENDIAYFSRKYKNFIKRKKYFKKHMSS

Query:  QKESKDEKSKKDEVICYECKRSGHIRTDCP
        QK SK EKSKKDEVICYECK+  HIRTDCP
Subjt:  QKESKDEKSKKDEVICYECKRSGHIRTDCP

KAA0046765.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]1.38e-4775.86Show/hide
Query:  IQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNKN--------------EDDLDENDIAYFSRKYKNFIKRKKYFKKHMSSQKESKDEKSKKDEVI
        IQEAKDLTKLP EELIGSLMTHEIIM  HLEDESKK K+              EDDLD++DI Y SRKYKNFIKRKKYFKKH+S+QKESK EKSKKDEVI
Subjt:  IQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNKN--------------EDDLDENDIAYFSRKYKNFIKRKKYFKKHMSSQKESKDEKSKKDEVI

Query:  CYECKRSGHIRTDCPL
        CYECK+S HIRTDCPL
Subjt:  CYECKRSGHIRTDCPL

KAA0051650.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]1.45e-7189.21Show/hide
Query:  MNQLKESKLNMLGLGKVYTTFENSRKILRSLPKTWNAKVTAIQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNKN--------------EDDLDE
        MNQLKESKLNMLGLGKVYTTFENSRKILRSLPKTWNAKVTAIQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNK+              EDDLDE
Subjt:  MNQLKESKLNMLGLGKVYTTFENSRKILRSLPKTWNAKVTAIQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNKN--------------EDDLDE

Query:  NDIAYFSRKYKNFIKRKKYFKKHMSSQKESKDEKSKKDE
        NDIAYFSRKYKNFIKRKKYFKKHMSSQKESKDEKSKKDE
Subjt:  NDIAYFSRKYKNFIKRKKYFKKHMSSQKESKDEKSKKDE

XP_022931810.1 uncharacterized protein LOC111438099 [Cucurbita moschata]1.50e-5270Show/hide
Query:  LNML-GLGKVYTTFENSRKILRSLPKTWNAKVTAIQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNKN------------EDDLDENDIAYFSRK
        LN L  LGKVY+T EN RKILRSLPK+W AKVTAIQEAKDLTKLP +EL+GSLMTHEI M  H+E+ESKK K+            ED LDE+D+AYF+RK
Subjt:  LNML-GLGKVYTTFENSRKILRSLPKTWNAKVTAIQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNKN------------EDDLDENDIAYFSRK

Query:  YKNFIKRKKYFKKHMSSQKESKDEKSKKDEVICYECKRSG
        YKNFIKRKK FKKH ++QKESK EKSK DEVICYECK+ G
Subjt:  YKNFIKRKKYFKKHMSSQKESKDEKSKKDEVICYECKRSG

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]9.08e-6682.07Show/hide
Query:  GLGKVYTTFENSRKILRSLPKTWNAKVTAIQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNKN--------------EDDLDENDIAYFSRKYKN
        GLGKVYTT EN RKILRSLPKTW AKVTAIQEAKDLTKLP EELIGSLMTHEIIMK HLEDESKK K+              ED LDE+DIAYFSRKYKN
Subjt:  GLGKVYTTFENSRKILRSLPKTWNAKVTAIQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNKN--------------EDDLDENDIAYFSRKYKN

Query:  FIKRKKYFKKHMSSQKESKDEKSKKDEVICYECKRSGHIRTDCPL
        FIKRKKYFKKH+S+QKESK EKSKKDEVICYECKRSGHIRTDCPL
Subjt:  FIKRKKYFKKHMSSQKESKDEKSKKDEVICYECKRSGHIRTDCPL

TrEMBL top hitse value%identityAlignment
A0A5A7TRZ7 Zf-CCHC domain-containing protein/UBN2 domain-containing protein4.2e-4376.15Show/hide
Query:  RKILRSLPKTWNAKVTAIQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNK------------NEDDLDENDIAYFSRKYKNFIKRKKYFKKHMSS
        RKIL  LPKTW+AKVTAIQEAKDLTKLP EELIGSLMTHEIIM+ HLEDESKK K            +EDDLDE+DI YFSRKYKNFIKRKK FKK++S+
Subjt:  RKILRSLPKTWNAKVTAIQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNK------------NEDDLDENDIAYFSRKYKNFIKRKKYFKKHMSS

Query:  QKESKDEKSKKDEVICYECKRSGHIRTDCP
        QK SK EKSKKDEVICYECK+  HIRTDCP
Subjt:  QKESKDEKSKKDEVICYECKRSGHIRTDCP

A0A5A7TZF4 Zf-CCHC domain-containing protein/UBN2 domain-containing protein2.6e-3775.86Show/hide
Query:  IQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNK--------------NEDDLDENDIAYFSRKYKNFIKRKKYFKKHMSSQKESKDEKSKKDEVI
        IQEAKDLTKLP EELIGSLMTHEIIM  HLEDESKK K              +EDDLD++DI Y SRKYKNFIKRKKYFKKH+S+QKESK EKSKKDEVI
Subjt:  IQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNK--------------NEDDLDENDIAYFSRKYKNFIKRKKYFKKHMSSQKESKDEKSKKDEVI

Query:  CYECKRSGHIRTDCPL
        CYECK+S HIRTDCPL
Subjt:  CYECKRSGHIRTDCPL

A0A5A7U923 Zf-CCHC domain-containing protein/UBN2 domain-containing protein4.3e-5689.21Show/hide
Query:  MNQLKESKLNMLGLGKVYTTFENSRKILRSLPKTWNAKVTAIQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKN--------------KNEDDLDE
        MNQLKESKLNMLGLGKVYTTFENSRKILRSLPKTWNAKVTAIQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKN              K+EDDLDE
Subjt:  MNQLKESKLNMLGLGKVYTTFENSRKILRSLPKTWNAKVTAIQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKN--------------KNEDDLDE

Query:  NDIAYFSRKYKNFIKRKKYFKKHMSSQKESKDEKSKKDE
        NDIAYFSRKYKNFIKRKKYFKKHMSSQKESKDEKSKKDE
Subjt:  NDIAYFSRKYKNFIKRKKYFKKHMSSQKESKDEKSKKDE

A0A5D3E1G2 Zf-CCHC domain-containing protein/UBN2 domain-containing protein5.8e-3775Show/hide
Query:  IQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNK--------------NEDDLDENDIAYFSRKYKNFIKRKKYFKKHMSSQKESKDEKSKKDEVI
        IQEAKDLTKLP EELIGSLMTHEIIM  HLEDESKK K              +EDDLD++DI Y SRKYKNFIK+KKYFKKH+S+QKESK EKSKKDEVI
Subjt:  IQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNK--------------NEDDLDENDIAYFSRKYKNFIKRKKYFKKHMSSQKESKDEKSKKDEVI

Query:  CYECKRSGHIRTDCPL
        CYECK+S HIRTDCPL
Subjt:  CYECKRSGHIRTDCPL

A0A6J1F0H1 uncharacterized protein LOC1114380991.8e-4170Show/hide
Query:  LNML-GLGKVYTTFENSRKILRSLPKTWNAKVTAIQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNK------------NEDDLDENDIAYFSRK
        LN L  LGKVY+T EN RKILRSLPK+W AKVTAIQEAKDLTKLP +EL+GSLMTHEI M  H+E+ESKK K            +ED LDE+D+AYF+RK
Subjt:  LNML-GLGKVYTTFENSRKILRSLPKTWNAKVTAIQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNK------------NEDDLDENDIAYFSRK

Query:  YKNFIKRKKYFKKHMSSQKESKDEKSKKDEVICYECKRSG
        YKNFIKRKK FKKH ++QKESK EKSK DEVICYECK+ G
Subjt:  YKNFIKRKKYFKKHMSSQKESKDEKSKKDEVICYECKRSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCAACTTAAAGAGTCTAAACTTAACATGCTTGGTCTTGGTAAAGTCTATACAACTTTTGAAAATAGTAGAAAAATTCTAAGGTCTCTACCTAAGACTTGGAACGC
TAAGGTGACGGCAATCCAAGAAGCAAAGGATCTCACCAAACTTCCATTTGAGGAGCTCATTGGCTCACTTATGACTCATGAGATCATTATGAAGATGCACTTGGAGGATG
AGTCCAAAAAGAATAAGAATGAGGATGACCTTGATGAAAATGACATTGCTTATTTCTCACGTAAGTACAAAAATTTCATAAAAAGGAAGAAGTATTTCAAGAAACACATG
TCATCTCAAAAAGAGTCAAAAGATGAGAAAAGCAAAAAGGACGAGGTGATTTGTTATGAATGCAAAAGGTCGGGTCACATAAGAACGGATTGCCCTCTCCCTCGAATCAT
CTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCAACTTAAAGAGTCTAAACTTAACATGCTTGGTCTTGGTAAAGTCTATACAACTTTTGAAAATAGTAGAAAAATTCTAAGGTCTCTACCTAAGACTTGGAACGC
TAAGGTGACGGCAATCCAAGAAGCAAAGGATCTCACCAAACTTCCATTTGAGGAGCTCATTGGCTCACTTATGACTCATGAGATCATTATGAAGATGCACTTGGAGGATG
AGTCCAAAAAGAATAAGAATGAGGATGACCTTGATGAAAATGACATTGCTTATTTCTCACGTAAGTACAAAAATTTCATAAAAAGGAAGAAGTATTTCAAGAAACACATG
TCATCTCAAAAAGAGTCAAAAGATGAGAAAAGCAAAAAGGACGAGGTGATTTGTTATGAATGCAAAAGGTCGGGTCACATAAGAACGGATTGCCCTCTCCCTCGAATCAT
CTAA
Protein sequenceShow/hide protein sequence
MNQLKESKLNMLGLGKVYTTFENSRKILRSLPKTWNAKVTAIQEAKDLTKLPFEELIGSLMTHEIIMKMHLEDESKKNKNEDDLDENDIAYFSRKYKNFIKRKKYFKKHM
SSQKESKDEKSKKDEVICYECKRSGHIRTDCPLPRII