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IVF0024540 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024540
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibosomal protein S19
Genome locationchr03:22860697..22861895
RNA-Seq ExpressionIVF0024540
SyntenyIVF0024540
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002222 - Ribosomal protein S19/S15
IPR005732 - Ribosomal protein S19, bacterial-type
IPR020934 - Ribosomal protein S19 conserved site
IPR023575 - Ribosomal protein S19/S15, superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064877.1 ribosomal protein S19 [Cucumis melo var. makuwa]1.49e-61100Show/hide
Query:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGKK
        MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGKK
Subjt:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGKK

KAE8652214.1 hypothetical protein Csa_022320 [Cucumis sativus]3.18e-5394.25Show/hide
Query:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAP
        MSPRSIWKGGFVDAFL KMKKNVEPLMN+KIWSRGSMILPEFVGSTVRVYNGKNF+RCKITE RVGHKFGEFAMTRKR+IARSNSAP
Subjt:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAP

YP_003587264.1 ribosomal protein S19 [Citrullus lanatus]2.43e-4475Show/hide
Query:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGG
        M  RSIWKG FVDAFL++MKK  +PL+NRKIWSR S ILPEFV S+VR+YNGK FVRCKITEGRVGHKFGEFA+TRKRR++R+N  P K+GG
Subjt:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGG

YP_003587364.1 ribosomal protein S19 [Cucurbita pepo]6.75e-4373.91Show/hide
Query:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGG
        M  RSIWKG FVDAFL++MKK  +PL+NRKIWSR S ILPEFV S+VR+YNGK FVRCKITEGRVGHKFGEFA+TRKRR++R+N  P K+ G
Subjt:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGG

YP_003587380.1 ribosomal protein S19 [Cucurbita pepo]5.97e-4373.91Show/hide
Query:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGG
        M  RSIWKG FVDAFL++MKK  +PL+NRKIWSR S ILPEFV S+VR+YNGK FVRCKITEGRVGHKFGEFA+TRKRR++R+N  P K+ G
Subjt:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGG

TrEMBL top hitse value%identityAlignment
A0A0A0LPU9 Uncharacterized protein2.0e-4393.62Show/hide
Query:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGKK
        MSPRSIWKGGFVDAFL KMKKNVEPLMN+KIWSRGSMILPEFVGSTVRVYNGKNF+RCKITE RVGHKFGEFAMTRKR+IARSNSAP KRGGKK
Subjt:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGKK

A0A5A7VCX8 Ribosomal protein S192.6e-46100Show/hide
Query:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGKK
        MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGKK
Subjt:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGKK

D5I3D4 Ribosomal protein S193.3e-3375Show/hide
Query:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGG
        M  RSIWKG FVDAFL++MKK  +PL+NRKIWSR S ILPEFV S+VR+YNGK FVRCKITEGRVGHKFGEFA+TRKRR++R+N  P K+GG
Subjt:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGG

D5I3F0 Ribosomal protein S192.8e-3273.12Show/hide
Query:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGK
        M  RSIWKG FVDAFL++MKK  +PL+NRKIWSR S ILPEFV S+VR+YNGK FVRCKITEGRVGHKFGEFA+TRKRR++R+N  P K+ G+
Subjt:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGK

D5I3G6 Ribosomal protein S192.8e-3273.12Show/hide
Query:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGK
        M  RSIWKG FVDAFL++MKK  +PL+NRKIWSR S ILPEFV S+VR+YNGK FVRCKITEGRVGHKFGEFA+TRKRR++R+N  P K+ G+
Subjt:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGK

SwissProt top hitse value%identityAlignment
B6IRR0 30S ribosomal protein S193.9e-1551.32Show/hide
Query:  RSIWKGGFVDAFLMKMKKNVEPLMNR---KIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTR
        RS+WKG FVD +L+K  +           KIWSR S ILP+FVG T  VYNG+ F+   +TE  +GHKFGEF+ TR
Subjt:  RSIWKGGFVDAFLMKMKKNVEPLMNR---KIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTR

P26874 Ribosomal protein S19, mitochondrial4.9e-1855.81Show/hide
Query:  RSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAK
        RSIWKG FVD  L K KK     +  +IWSR S ILP+FVG   ++YNGK FV  KITE  VGHKFGEFA TRK       + P+K
Subjt:  RSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAK

P27527 Ribosomal protein S19, mitochondrial5.9e-3270.21Show/hide
Query:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGKK
        M  RSIWKG FVDAFL++MKK  + L NRKIWSR S ILPEFV   VR+YNGK FVRCKITEG+VGHKFGEFA TRKRR +R+N  P ++ GKK
Subjt:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGKK

P39697 40S ribosomal protein S19, mitochondrial2.7e-2472.73Show/hide
Query:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRK
        M  RS+WK  FVDAFLMK KKN    +NRKIWSR S ILPE+V S VR+YNGK  VRCKITEG+VGHKFGEFA TRK
Subjt:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRK

P50893 Ribosomal protein S19, mitochondrial5.1e-1546.34Show/hide
Query:  RSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNS
        R+IWKG F+D F    +KN     N KI+SR S++ P+F+G  V +YNG  ++  KI E  +GHKFGEFA TRK  I +  +
Subjt:  RSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNS

Arabidopsis top hitse value%identityAlignment
AT1G04270.2 cytosolic ribosomal protein S151.1e-0433.33Show/hide
Query:  AFLMKMKKNVEPLMNRK-----IWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRK
        A + K++K  E     K        R  +I+PE +GS + VYNGK F + +I    +GH   EF+++ K
Subjt:  AFLMKMKKNVEPLMNRK-----IWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRK

AT5G09490.1 Ribosomal protein S19 family protein4.9e-0543.18Show/hide
Query:  RGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRK
        R  +I+PE +GS + VYNGK F + +I    +GH   EF++T K
Subjt:  RGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRK

AT5G47320.1 ribosomal protein S191.9e-2572.73Show/hide
Query:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRK
        M  RS+WK  FVDAFLMK KKN    +NRKIWSR S ILPE+V S VR+YNGK  VRCKITEG+VGHKFGEFA TRK
Subjt:  MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRK

AT5G63070.1 Ribosomal protein S19 family protein1.4e-0444.44Show/hide
Query:  RGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKR
        R  +I+PE +GS V V+NGK F    I    +GH   EF+MT K+
Subjt:  RGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKR

ATCG00820.1 ribosomal protein S194.0e-0732.22Show/hide
Query:  RSIWKGGFVDAFLMKMKKNVEPLMNRKI---WSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKR
        RS+ K  FV   L++  + +     ++I   WSR S I+P  +G T+ ++NG+  +   I +  VGHK GEF+ T   R    N   ++R
Subjt:  RSIWKGGFVDAFLMKMKKNVEPLMNRKI---WSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCCACGATCTATATGGAAGGGCGGTTTTGTTGATGCATTCCTGATGAAAATGAAGAAGAATGTAGAACCTCTTATGAACAGGAAAATTTGGTCACGTGGATCTAT
GATTCTGCCGGAATTCGTTGGTAGCACCGTACGAGTTTACAATGGGAAAAATTTTGTTCGTTGTAAGATCACTGAAGGAAGAGTTGGTCATAAGTTTGGAGAGTTTGCTA
TGACACGGAAACGAAGAATTGCGAGATCAAATAGTGCACCGGCAAAAAGAGGGGGGAAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
CAATTCTTTCATCTTCTTCTTCAACTCTCACGTCTCTGCCTTTCACAAATCTCTAATCTTCATTCTTCACAGTATCATCTTTCTCTTCGTTCATGTCGCCACGATCTATA
TGGAAGGGCGGTTTTGTTGATGCATTCCTGATGAAAATGAAGAAGAATGTAGAACCTCTTATGAACAGGAAAATTTGGTCACGTGGATCTATGATTCTGCCGGAATTCGT
TGGTAGCACCGTACGAGTTTACAATGGGAAAAATTTTGTTCGTTGTAAGATCACTGAAGGAAGAGTTGGTCATAAGTTTGGAGAGTTTGCTATGACACGGAAACGAAGAA
TTGCGAGATCAAATAGTGCACCGGCAAAAAGAGGGGGGAAAAAGTGAAGTTCAAGCGCATATGCAATTTGGTATTCACTTTTTCTTTCTTATTCTCAATTCAAGGTTAGT
AAAATCAGTCTGGTGCTGTCAATGTAGTTTGTGTTTTCCTATTTTGCGCCACAGACCGTCACTGTTTTCGTTTGATATCGCCAAAGCTGTTATTGGTTTCTGTATGATTT
TGATATACAACTGTATTTCAAATTCTATATGAGTTCTGTTCTACCATGCTTTGACAGAACTATCTCGAGATATTGGGGTAATAACAATTTTTTGATCTTGAAATTCTGAA
ATTATAAGGACGTCCATGTTACAAGATAGCCTTTTTACTTTTGAAAACTTGTGTTAAATGTTGATACAATAAATTTTCCTCGTTAATTCATTCATATACTTGAACTTTTC
ATCATTTTTCGTTTCTTCAAGCAAGTTCTTTAAAAACTACATTTTTTGGTATTCACAAACTGGACATAGTTTTTACAAACGCATACCAAAACAAAGGTAAAAATCAGAAA
CAAAAAATTAAATGGTTATTGAAGGAACCATAATTTAAAATCAGAATTTCTTTTTTTAAGTTCAACAAAGTAAAAGGGTGATGCTCCTCATTCTAACTATAAGTAATCAT
ATGCTAATTGAAAGACCCTTTTTCAAAAGTGCACAAACAAATTTATAGTCATTTGAACAAGAAGAATGGGTCATTCAAGACTGCCTATTAGTAAAATAAACACTATTATT
TACTATTTCTTATAGTTTTTACTATTTTACCTTTACAGTGTTTATCATTTTTCATCTGATGCATAGTATTATAATCCAAATTAAAATAATCAATACCCC
Protein sequenceShow/hide protein sequence
MSPRSIWKGGFVDAFLMKMKKNVEPLMNRKIWSRGSMILPEFVGSTVRVYNGKNFVRCKITEGRVGHKFGEFAMTRKRRIARSNSAPAKRGGKK