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IVF0024542 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024542
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibosomal protein L23
Genome locationtig00007088:380943..381645
RNA-Seq ExpressionIVF0024542
SyntenyIVF0024542
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1210637.1 hypothetical protein CJ030_MR6G010321 [Morella rubra]5.52e-4283.95Show/hide
Query:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTRG
        MINGSSRRDLL +SQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG          YPLRTWLPS+YRGHDNWYTRG
Subjt:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTRG

KAD6454409.1 hypothetical protein E3N88_09115 [Mikania micrantha]4.23e-4472.17Show/hide
Query:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTRG-------------------
        MINGSSRRDLL +SQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG          YPLRTWLPS+YRGHDNWYTRG                   
Subjt:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTRG-------------------

Query:  LRPIETVYLRLSLGP
        LRPIETVYLRLSLGP
Subjt:  LRPIETVYLRLSLGP

KAF3952863.1 hypothetical protein CMV_021630 [Castanea mollissima]5.19e-4283.95Show/hide
Query:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTRG
        MINGSSRRDLL +SQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG          YPLRTWLPS+YRGHDNWYTRG
Subjt:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTRG

YP_010046255.1 ribosomal protein L23 [Dolichandrone spathacea]4.40e-4282.72Show/hide
Query:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTRG
        MINGSSRRDLL +SQNFCRSIPAGAENPSLSRLCYR+LWGSRNRRALILG          YPLRTWLPS+YRGHDNWYTRG
Subjt:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTRG

YP_010143470.1 ribosomal protein L23 [Peganum harmala]1.53e-4283.95Show/hide
Query:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTRG
        MINGSSRRDLL +SQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG          YPLRTWLPS+YRGHDNWYTRG
Subjt:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTRG

TrEMBL top hitse value%identityAlignment
A0A2J6M7Z5 Uncharacterized protein5.6e-3282.14Show/hide
Query:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTRGLRP
        MINGSSRRDLL +SQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG          YPLRTWLPS+YRGHDNWYTRG+ P
Subjt:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTRGLRP

A0A2U1NRB0 Uncharacterized protein5.6e-3282.14Show/hide
Query:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTRGLRP
        MINGSSRRDLL +SQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG          YPLRTWLPS+YRGHDNWYTRG+ P
Subjt:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTRGLRP

A0A5N6PI45 Proton_antipo_M domain-containing protein7.6e-3772.17Show/hide
Query:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTR-------------------G
        MINGSSRRDLL +SQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG          YPLRTWLPS+YRGHDNWYTR                   G
Subjt:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTR-------------------G

Query:  LRPIETVYLRLSLGP
        LRPIETVYLRLSLGP
Subjt:  LRPIETVYLRLSLGP

A0A6A1WLU0 Uncharacterized protein5.6e-3282.14Show/hide
Query:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTRGLRP
        MINGSSRRDLL +SQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG          YPLRTWLPS+YRGHDNWYTRG+ P
Subjt:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTRGLRP

A0A6L2J4Z4 Metallocarboxypeptidase inhibitor5.6e-3273.47Show/hide
Query:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTRG--LRPIETVYLRLSLGP
        MINGSSRRDLL +SQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG          YPLRTWLPS+YRGHDNWYTRG  L   +T + +L   P
Subjt:  MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILG----------YPLRTWLPSLYRGHDNWYTRG--LRPIETVYLRLSLGP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTTCATTCTCAAAACTTCTGTCGCTCCATCCCCGCAGGGGCAGAGAACCCATCGCTGTCTCGGCTGTGCTACCGGAG
GCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGTTATCCGCTCCGCACTTGGCTACCCAGCCTTTACCGTGGGCACGATAACTGGTACACCAGAGGCCTACGCC
CCATAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTTCATTCTCAAAACTTCTGTCGCTCCATCCCCGCAGGGGCAGAGAACCCATCGCTGTCTCGGCTGTGCTACCGGAG
GCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGTTATCCGCTCCGCACTTGGCTACCCAGCCTTTACCGTGGGCACGATAACTGGTACACCAGAGGCCTACGCC
CCATAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAG
Protein sequenceShow/hide protein sequence
MINGSSRRDLLFHSQNFCRSIPAGAENPSLSRLCYRRLWGSRNRRALILGYPLRTWLPSLYRGHDNWYTRGLRPIETVYLRLSLGP