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IVF0024544 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024544
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr01:20448506..20448859
RNA-Seq ExpressionIVF0024544
SyntenyIVF0024544
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033487.1 uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa]1.98e-5781.58Show/hide
Query:  MVSTNLKANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERK
        M S N K  KH WTTIE+EALVECLLQLVE+G WRVDNGTFK GYLVQVQKLMKEKI ESNIQVTPNLES VKILKKQYT IA+MMGP C+ F WN+ERK
Subjt:  MVSTNLKANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERK

Query:  CIEAEKSVFDDWVK
        CIEAEKSV +DWVK
Subjt:  CIEAEKSVFDDWVK

KAA0041970.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]9.19e-7399.1Show/hide
Query:  KANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERKCIEAEK
        +ANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERKCIEAEK
Subjt:  KANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERKCIEAEK

Query:  SVFDDWVKVLR
        SVFDDWVKVLR
Subjt:  SVFDDWVKVLR

KAA0050106.1 retrotransposon protein [Cucumis melo var. makuwa]9.84e-6283.76Show/hide
Query:  MVSTNLKANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERK
        M STN KA KH+WTTI+ E LVECLLQLVEEGGWR DNGTFK GYLVQVQKLMKEKI  SNIQVTPNL+SRVKILKKQY  IA+MMGPAC+ FGWNEERK
Subjt:  MVSTNLKANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERK

Query:  CIEAEKSVFDDWVKVLR
        CIEAEKSVFDDWVK  R
Subjt:  CIEAEKSVFDDWVKVLR

TYJ96933.1 retrotransposon protein [Cucumis melo var. makuwa]2.35e-6284.21Show/hide
Query:  MVSTNLKANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERK
        M STN KA KH+WTTI+++ALVECLLQLVEEGGWR +N TFK  YLVQVQKLMKEKIP SNIQVT NLESRVK LKKQYT IAKMMGPAC+ FGWNEERK
Subjt:  MVSTNLKANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERK

Query:  CIEAEKSVFDDWVK
        CIEAEKSVFDDWVK
Subjt:  CIEAEKSVFDDWVK

XP_008455678.1 PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]6.23e-6284.21Show/hide
Query:  MVSTNLKANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERK
        M STN KA KH+WTTI+++ALVECLLQLVEEGGWR +N TFK  YLVQVQKLMKEKIP SNIQVT NLESRVK LKKQYT IAKMMGPAC+ FGWNEERK
Subjt:  MVSTNLKANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERK

Query:  CIEAEKSVFDDWVK
        CIEAEKSVFDDWVK
Subjt:  CIEAEKSVFDDWVK

TrEMBL top hitse value%identityAlignment
A0A1S3C252 uncharacterized protein At2g29880-like1.2e-4884.21Show/hide
Query:  MVSTNLKANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERK
        M STN KA KH+WTTI+++ALVECLLQLVEEGGWR +N TFK  YLVQVQKLMKEKIP SNIQVT NLESRVK LKKQYT IAKMMGPAC+ FGWNEERK
Subjt:  MVSTNLKANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERK

Query:  CIEAEKSVFDDWVK
        CIEAEKSVFDDWVK
Subjt:  CIEAEKSVFDDWVK

A0A5A7SW62 Myb_DNA-bind_3 domain-containing protein9.3e-4681.58Show/hide
Query:  MVSTNLKANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERK
        M S N K  KH WTTIE+EALVECLLQLVE+G WRVDNGTFK GYLVQVQKLMKEKI ESNIQVTPNLES VKILKKQYT IA+MMGP C+ F WN+ERK
Subjt:  MVSTNLKANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERK

Query:  CIEAEKSVFDDWVK
        CIEAEKSV +DWVK
Subjt:  CIEAEKSVFDDWVK

A0A5A7TF70 Putative nuclease HARBI11.4e-5799.1Show/hide
Query:  KANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERKCIEAEK
        +ANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERKCIEAEK
Subjt:  KANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERKCIEAEK

Query:  SVFDDWVKVLR
        SVFDDWVKVLR
Subjt:  SVFDDWVKVLR

A0A5A7U7F7 Retrotransposon protein2.0e-4883.76Show/hide
Query:  MVSTNLKANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERK
        M STN KA KH+WTTI+ E LVECLLQLVEEGGWR DNGTFK GYLVQVQKLMKEKI  SNIQVTPNL+SRVKILKKQY  IA+MMGPAC+ FGWNEERK
Subjt:  MVSTNLKANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERK

Query:  CIEAEKSVFDDWVKVLR
        CIEAEKSVFDDWVK  R
Subjt:  CIEAEKSVFDDWVKVLR

A0A5D3BC95 Retrotransposon protein1.2e-4884.21Show/hide
Query:  MVSTNLKANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERK
        M STN KA KH+WTTI+++ALVECLLQLVEEGGWR +N TFK  YLVQVQKLMKEKIP SNIQVT NLESRVK LKKQYT IAKMMGPAC+ FGWNEERK
Subjt:  MVSTNLKANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERK

Query:  CIEAEKSVFDDWVK
        CIEAEKSVFDDWVK
Subjt:  CIEAEKSVFDDWVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTCGACAAATTTAAAAGCCAATAAGCATCAGTGGACAACCATTGAGAATGAGGCGTTAGTTGAGTGCTTACTACAACTAGTGGAGGAAGGTGGCTGGAGGGTTGA
TAATGGAACATTCAAATCAGGATATTTGGTACAAGTACAAAAACTAATGAAAGAAAAAATTCCTGAAAGCAATATACAAGTGACTCCAAATCTAGAGTCGAGAGTAAAAA
TTTTAAAGAAGCAGTACACTGTCATAGCAAAGATGATGGGGCCAGCGTGTAATGAGTTTGGCTGGAATGAGGAACGAAAGTGCATTGAGGCAGAGAAATCCGTGTTCGAT
GATTGGGTTAAGGTATTAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTCGACAAATTTAAAAGCCAATAAGCATCAGTGGACAACCATTGAGAATGAGGCGTTAGTTGAGTGCTTACTACAACTAGTGGAGGAAGGTGGCTGGAGGGTTGA
TAATGGAACATTCAAATCAGGATATTTGGTACAAGTACAAAAACTAATGAAAGAAAAAATTCCTGAAAGCAATATACAAGTGACTCCAAATCTAGAGTCGAGAGTAAAAA
TTTTAAAGAAGCAGTACACTGTCATAGCAAAGATGATGGGGCCAGCGTGTAATGAGTTTGGCTGGAATGAGGAACGAAAGTGCATTGAGGCAGAGAAATCCGTGTTCGAT
GATTGGGTTAAGGTATTAAGATGA
Protein sequenceShow/hide protein sequence
MVSTNLKANKHQWTTIENEALVECLLQLVEEGGWRVDNGTFKSGYLVQVQKLMKEKIPESNIQVTPNLESRVKILKKQYTVIAKMMGPACNEFGWNEERKCIEAEKSVFD
DWVKVLR