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IVF0024552 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024552
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr04:16575234..16575551
RNA-Seq ExpressionIVF0024552
SyntenyIVF0024552
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035847.1 putative mitochondrial protein [Cucumis melo var. makuwa]4.96e-3063.81Show/hide
Query:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE
        MDD EE  F+SSVST P  Q      SV+T V++++NSS  +QKE+  N  GN PSS+IQKNH SSS I DP   I TRKKDKIDYAKLIANICYTSSIE
Subjt:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE

Query:  LTSVD
         TSV+
Subjt:  LTSVD

KAA0036710.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.87e-6096.19Show/hide
Query:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE
        MDDEEEFLF+SSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSY+QKNHPSSSIIGDPSFGIIT+KKDKIDYAKLIANICYTSSIE
Subjt:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE

Query:  LTSVD
         TSVD
Subjt:  LTSVD

TYK03685.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.35e-6097.14Show/hide
Query:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE
        MDDEEEFLF+SSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSY+QKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE
Subjt:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE

Query:  LTSVD
         TSVD
Subjt:  LTSVD

TYK22672.1 gag-pol polyprotein [Cucumis melo var. makuwa]6.55e-2556.19Show/hide
Query:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE
        +DD+++F    S   + HE   T S +V+T V + ++SSKS+QKEV+++    +PSS++QKNHPSS IIGDPS GI T+KKDKIDYAK+IANICYTS IE
Subjt:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE

Query:  LTSVD
         T V+
Subjt:  LTSVD

TYK27718.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.83e-4180Show/hide
Query:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE
        MDDEEE LF+ S+S VP EQ T T  SVNTEVISN NSSKSSQKEVISNEGGN PSS++ KNHPSSS IGDPS GI TRKKDKIDYAKLIANICYTSSIE
Subjt:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE

Query:  LTSVD
         TS++
Subjt:  LTSVD

TrEMBL top hitse value%identityAlignment
A0A5A7T028 Putative mitochondrial protein1.9e-4596.19Show/hide
Query:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE
        MDDEEEFLF+SSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSY+QKNHPSSSIIGDPSFGIIT+KKDKIDYAKLIANICYTSSIE
Subjt:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE

Query:  LTSVD
         TSVD
Subjt:  LTSVD

A0A5A7UQX6 Uncharacterized protein2.1e-2077.63Show/hide
Query:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGI
        MDDEEE LF+ S+STVP EQ T T  SVNTEVISN NSSKSSQKEVISNEGGN PSS++ KNHPSSS IGDPS G+
Subjt:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGI

A0A5D3BX65 Putative mitochondrial protein8.4e-4697.14Show/hide
Query:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE
        MDDEEEFLF+SSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSY+QKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE
Subjt:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE

Query:  LTSVD
         TSVD
Subjt:  LTSVD

A0A5D3DW56 Putative mitochondrial protein1.5e-3480Show/hide
Query:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE
        MDDEEE LF+ S+S VP EQ T T  SVNTEVISN NSSKSSQKEVISNEGGN PSS++ KNHPSSS IGDPS GI TRKKDKIDYAKLIANICYTSSIE
Subjt:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE

Query:  LTSVD
         TS++
Subjt:  LTSVD

A0A5D3E335 Putative mitochondrial protein1.3e-2263.81Show/hide
Query:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE
        MDD EE  F+SSVST P  Q      SV+T V++++NSS  +QKE+  N  GN PSS+IQKNH SSS I DP   I TRKKDKIDYAKLIANICYTSSIE
Subjt:  MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIE

Query:  LTSVD
         TSV+
Subjt:  LTSVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACGAGGAAGAATTTTTGTTTCGATCGTCTGTTTCTACTGTTCCCCATGAACAACTAACTACTACTAGTTCTTCAGTTAATACTGAAGTTATTAGCAATGAGAA
TAGCTCCAAATCTTCTCAGAAAGAGGTGATTTCGAATGAAGGAGGAAATGTTCCATCGTCATATATTCAGAAAAACCATCCTTCAAGTTCCATCATTGGGGATCCATCTT
TTGGTATTATTACCAGGAAGAAGGACAAGATTGATTATGCCAAATTGATTGCTAATATTTGTTATACTTCATCTATTGAGCTTACATCTGTAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGACGAGGAAGAATTTTTGTTTCGATCGTCTGTTTCTACTGTTCCCCATGAACAACTAACTACTACTAGTTCTTCAGTTAATACTGAAGTTATTAGCAATGAGAA
TAGCTCCAAATCTTCTCAGAAAGAGGTGATTTCGAATGAAGGAGGAAATGTTCCATCGTCATATATTCAGAAAAACCATCCTTCAAGTTCCATCATTGGGGATCCATCTT
TTGGTATTATTACCAGGAAGAAGGACAAGATTGATTATGCCAAATTGATTGCTAATATTTGTTATACTTCATCTATTGAGCTTACATCTGTAGATTAA
Protein sequenceShow/hide protein sequence
MDDEEEFLFRSSVSTVPHEQLTTTSSSVNTEVISNENSSKSSQKEVISNEGGNVPSSYIQKNHPSSSIIGDPSFGIITRKKDKIDYAKLIANICYTSSIELTSVD