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IVF0024553 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024553
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description40S ribosomal protein S26
Genome locationchr10:12564584..12567337
RNA-Seq ExpressionIVF0024553
SyntenyIVF0024553
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0019430 - removal of superoxide radicals (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004784 - superoxide dismutase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000892 - Ribosomal protein S26e
IPR038551 - Ribosomal protein S26e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599946.1 40S ribosomal protein S26-1, partial [Cucurbita argyrosperma subsp. sororia]2.29e-8593.33Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQ------APRPVGAGNPARV
        F+RRR+DQ KPGQPGQ      APRPVGAGNPARV
Subjt:  FIRRREDQAKPGQPGQ------APRPVGAGNPARV

XP_004146441.1 40S ribosomal protein S26-1 [Cucumis sativus]1.42e-89100Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPARV
        FIRRREDQAKPGQPGQAPRPVGAGNPARV
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPARV

XP_022941874.1 40S ribosomal protein S26-3-like [Cucurbita moschata]7.22e-8695.45Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQ---APRPVGAGNPARV
        F+RRR+DQ KPGQPGQ   APRPVGAGNPARV
Subjt:  FIRRREDQAKPGQPGQ---APRPVGAGNPARV

XP_022943123.1 40S ribosomal protein S26-1-like [Cucurbita moschata]2.28e-8696.9Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPARV
        FIRRR+DQ KPGQPGQAPRP GAG PARV
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPARV

XP_023529394.1 40S ribosomal protein S26-1-like [Cucurbita pepo subsp. pepo]2.28e-8696.9Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPARV
        FIRRR+DQ KPGQPGQAPRP GAG PARV
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPARV

TrEMBL top hitse value%identityAlignment
A0A0A0KM45 40S ribosomal protein S262.8e-67100Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPARV
        FIRRREDQAKPGQPGQAPRPVGAGNPARV
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPARV

A0A1S3C5M1 40S ribosomal protein S262.8e-67100Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPARV
        FIRRREDQAKPGQPGQAPRPVGAGNPARV
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPARV

A0A5A7VIJ0 40S ribosomal protein S262.8e-67100Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPARV
        FIRRREDQAKPGQPGQAPRPVGAGNPARV
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPARV

A0A6J1FWD9 40S ribosomal protein S267.6e-6596.9Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPARV
        FIRRR+DQ KPGQPGQAPRP GAG PARV
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPARV

A0A6J1JIN0 40S ribosomal protein S267.6e-6596.9Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPARV
        FIRRR+DQ KPGQPGQAPRP GAG PARV
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPARV

SwissProt top hitse value%identityAlignment
O45499 40S ribosomal protein S262.0e-3868.33Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNK  RGHV FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ +A  Y QY LPKLY K+ YC++CAIHS VVR RSR  RR+R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRP
        F  +R   A+PG PG  PRP
Subjt:  FIRRREDQAKPGQPGQAPRP

P49206 40S ribosomal protein S26-11.2e-5483.46Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPA
        F RR+ED  KPGQPGQAPRP G G  A
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPA

P49216 40S ribosomal protein S267.3e-4976.56Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVK+IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQEACV+D Y LPKLYAK+ +CVSCAIH+H+VRVRSR +RR+R+PP+R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQP-GQAPRPVGAGNPA
        F RRRED+ +  +P G AP P GA  PA
Subjt:  FIRRREDQAKPGQP-GQAPRPVGAGNPA

Q8LPJ7 40S ribosomal protein S26-21.2e-5483.46Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPA
        F RR+ED  KPGQPGQAPRP G G  A
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPA

Q9LYK9 40S ribosomal protein S26-33.4e-5484.25Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPA
        F RR+ED  KP QPGQAPRP G G PA
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPA

Arabidopsis top hitse value%identityAlignment
AT2G40510.1 Ribosomal protein S26e family protein8.3e-5683.46Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPA
        F RR+ED  KPGQPGQAPRP G G  A
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPA

AT2G40590.1 Ribosomal protein S26e family protein8.3e-5683.46Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPA
        F RR+ED  KPGQPGQAPRP G G  A
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPA

AT3G56340.1 Ribosomal protein S26e family protein2.4e-5584.25Show/hide
Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPA
        F RR+ED  KP QPGQAPRP G G PA
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTCAAGCGCAGGAACGGCGGACGCAACAAGCACGGCCGTGGACACGTTAAGTTCATTCGGTGCTCCAACTGCGGGAAATGCTGTCCTAAGGACAAGGCTATTAA
GAGGTTTCTCGTGAGGAATATTGTGGAGCAGGCTGCTGTCAGGGATGTTCAAGAAGCCTGTGTCTATGACCAATATACTCTTCCTAAGCTTTATGCTAAGATGCAGTACT
GTGTTTCCTGTGCTATTCACTCACATGTTGTGCGAGTTCGATCTCGCACTGATAGAAGAAATCGGCAACCACCACAGCGTTTCATCAGACGCAGGGAGGATCAGGCAAAG
CCCGGTCAGCCAGGTCAAGCACCTCGTCCTGTTGGAGCCGGAAATCCTGCTCGTGTATAA
mRNA sequenceShow/hide mRNA sequence
TCAGCCTTTGCCCACACAAAACCCTAATCGGCTGCCTCTCTCTCTCTGCTTCATTGAAGATCTCCAACTTTGTAACGATGACTTTCAAGCGCAGGAACGGCGGACGCAAC
AAGCACGGCCGTGGACACGTTAAGTTCATTCGGTGCTCCAACTGCGGGAAATGCTGTCCTAAGGACAAGGCTATTAAGAGGTTTCTCGTGAGGAATATTGTGGAGCAGGC
TGCTGTCAGGGATGTTCAAGAAGCCTGTGTCTATGACCAATATACTCTTCCTAAGCTTTATGCTAAGATGCAGTACTGTGTTTCCTGTGCTATTCACTCACATGTTGTGC
GAGTTCGATCTCGCACTGATAGAAGAAATCGGCAACCACCACAGCGTTTCATCAGACGCAGGGAGGATCAGGCAAAGCCCGGTCAGCCAGGTCAAGCACCTCGTCCTGTT
GGAGCCGGAAATCCTGCTCGTGTATAAAAGAAACCTTTTCATGGCTTCTACGAGTAAGTCGTAGGGATCTTTTATAGGCACTCTTTTATAGTTTGGTTGTTTCTTATGTG
GATGAAAGTGAATTTTTGAATCAATATGGAAACAAACTTATCTGAGAATTTTGCAACTTTGGAATGAGCTAAAGACCGGTAATTGAGTTATCCAATGAGTTTTCTTCACT
TTCTTGTTTGGATTGGATTTTC
Protein sequenceShow/hide protein sequence
MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAK
PGQPGQAPRPVGAGNPARV