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IVF0024565 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024565
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposon Tf2-1 polyprotein isoform X1
Genome locationchr10:20867135..20867506
RNA-Seq ExpressionIVF0024565
SyntenyIVF0024565
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033837.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.60e-3659.4Show/hide
Query:  METAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIGSEKAGTEDNN----------GGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGN
        MET+AKERS +S++L ES++RES  +  KENE SSS+ + S++    D N          G RNKFKKVEMPVF GED D WLF AERYFQ+H+LSES  
Subjt:  METAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIGSEKAGTEDNN----------GGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGN

Query:  MVVSTISFEGPTLNWYQSQEERDKFLLWANLKE
        M+VS +SF+GPTLNWY+SQEE+DKF    NLKE
Subjt:  MVVSTISFEGPTLNWYQSQEERDKFLLWANLKE

KAA0059479.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]2.06e-3656.82Show/hide
Query:  ETAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIGSEKA----GTEDNNGG------RNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNM
        ET+++ERS MS ++ ES  +ES     KE+E SSS+   S++       E  N G      RNKFKK+EMPVF GED D WLF AERYFQ+H+L+ESG M
Subjt:  ETAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIGSEKA----GTEDNNGG------RNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNM

Query:  VVSTISFEGPTLNWYQSQEERDKFLLWANLKE
        +VST+SF+GPTLNWY+SQEERDKF  W+N+KE
Subjt:  VVSTISFEGPTLNWYQSQEERDKFLLWANLKE

TYK02420.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]4.68e-3656.06Show/hide
Query:  ETAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIGSE----------KAGTEDNNGGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNM
        E +AKERS++SER+ +S  R+S     KENE + S    S+          K  +E+N+G RN+FKKVEMPVF GED D WLF  ERYFQ+H+L+ES  M
Subjt:  ETAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIGSE----------KAGTEDNNGGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNM

Query:  VVSTISFEGPTLNWYQSQEERDKFLLWANLKE
        +VSTISF+GP LNWY+ QEERDK+L W NLKE
Subjt:  VVSTISFEGPTLNWYQSQEERDKFLLWANLKE

TYK14529.1 CWF19-like protein 2-like protein [Cucumis melo var. makuwa]2.41e-77100Show/hide
Query:  METAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIGSEKAGTEDNNGGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNMVVSTISFEG
        METAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIGSEKAGTEDNNGGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNMVVSTISFEG
Subjt:  METAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIGSEKAGTEDNNGGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNMVVSTISFEG

Query:  PTLNWYQSQEERDKFLLWANLKE
        PTLNWYQSQEERDKFLLWANLKE
Subjt:  PTLNWYQSQEERDKFLLWANLKE

TYK19603.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]6.51e-4570.83Show/hide
Query:  METAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIGSEKA----GTEDNNGGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNMVVSTI
        MET A ERSMMSER  ESM RES  T+ KEN+PS++RE GSEKA     TEDNNG RNKFKKVEM VFN ED DLWLF  +RYFQ+H+LSE   +VVSTI
Subjt:  METAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIGSEKA----GTEDNNGGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNMVVSTI

Query:  SFEGPTLNWYQSQEERDKFL
        SF+GP LNWY+SQEER+KFL
Subjt:  SFEGPTLNWYQSQEERDKFL

TrEMBL top hitse value%identityAlignment
A0A5A7SMQ7 Ty3/gypsy retrotransposon protein2.0e-3057.48Show/hide
Query:  METAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIG----SEKAGTEDNNGGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNMVVSTI
        ME  AKER+M  ER+ ES ++ SP T  K  + SSS +IG      K  +++N   R+KFKKVEMPVF GED + WLF AERYFQ+H+L+ES  M+VSTI
Subjt:  METAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIG----SEKAGTEDNNGGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNMVVSTI

Query:  SFEGPTLNWYQSQEERDKFLLWANLKE
         F+GP LNWY+SQEER+KF  W NLKE
Subjt:  SFEGPTLNWYQSQEERDKFLLWANLKE

A0A5A7SX47 Ty3/gypsy retrotransposon protein1.1e-3159.4Show/hide
Query:  METAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIGSEKAGTEDNN----------GGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGN
        MET+AKERS +S++L ES++RES  +  KENE SSS+ + S++    D N          G RNKFKKVEMPVF GED D WLF AERYFQ+H+LSES  
Subjt:  METAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIGSEKAGTEDNN----------GGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGN

Query:  MVVSTISFEGPTLNWYQSQEERDKFLLWANLKE
        M+VS +SF+GPTLNWY+SQEE+DKF    NLKE
Subjt:  MVVSTISFEGPTLNWYQSQEERDKFLLWANLKE

A0A5A7V5U6 Ty3/gypsy retrotransposon protein2.0e-3057.48Show/hide
Query:  METAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIG----SEKAGTEDNNGGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNMVVSTI
        ME  AKER+M  ER+ ES ++ SP T  K  + SSS +IG      K  +++N   R+KFKKVEMPVF GED + WLF AERYFQ+H+L+ES  M+VSTI
Subjt:  METAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIG----SEKAGTEDNNGGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNMVVSTI

Query:  SFEGPTLNWYQSQEERDKFLLWANLKE
         F+GP LNWY+SQEER+KF  W NLKE
Subjt:  SFEGPTLNWYQSQEERDKFLLWANLKE

A0A5D3CW87 CWF19-like protein 2-like protein1.3e-61100Show/hide
Query:  METAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIGSEKAGTEDNNGGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNMVVSTISFEG
        METAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIGSEKAGTEDNNGGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNMVVSTISFEG
Subjt:  METAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIGSEKAGTEDNNGGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNMVVSTISFEG

Query:  PTLNWYQSQEERDKFLLWANLKE
        PTLNWYQSQEERDKFLLWANLKE
Subjt:  PTLNWYQSQEERDKFLLWANLKE

A0A5D3D7X3 Transposon Tf2-1 polyprotein isoform X12.1e-3570.83Show/hide
Query:  METAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIGSEKA----GTEDNNGGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNMVVSTI
        MET A ERSMMSER  ESM RES  T+ KEN+PS++RE GSEKA     TEDNNG RNKFKKVEM VFN ED DLWLF  +RYFQ+H+LSE   +VVSTI
Subjt:  METAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIGSEKA----GTEDNNGGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNMVVSTI

Query:  SFEGPTLNWYQSQEERDKFL
        SF+GP LNWY+SQEER+KFL
Subjt:  SFEGPTLNWYQSQEERDKFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67020.1 unknown protein2.9e-0526.87Show/hide
Query:  KKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNMVVSTISFEGPTLNWYQSQEERDKFLLWANLKE
        +++EMPVF+G  +  W    ER+F++    +S  + +  +S EG  L W+  +    +F  W + ++
Subjt:  KKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNMVVSTISFEGPTLNWYQSQEERDKFLLWANLKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACGGCAGCGAAGGAGAGATCAATGATGAGTGAACGGCTGTTGGAATCAATGATGCGCGAGTCGCCGCTAACGAATATGAAGGAGAATGAACCATCTTCCAGTCG
CGAAATCGGTTCTGAAAAAGCCGGTACAGAAGATAACAATGGCGGCCGAAACAAATTCAAGAAAGTCGAAATGCCGGTCTTCAATGGCGAAGATCTCGACTTATGGTTGT
TCTGCGCGGAAAGGTACTTTCAACTTCATGAACTTAGTGAATCCGGGAACATGGTAGTATCGACCATTAGTTTCGAAGGTCCAACATTAAACTGGTACCAATCACAAGAG
GAGAGAGATAAGTTTCTACTCTGGGCAAACTTGAAGGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACGGCAGCGAAGGAGAGATCAATGATGAGTGAACGGCTGTTGGAATCAATGATGCGCGAGTCGCCGCTAACGAATATGAAGGAGAATGAACCATCTTCCAGTCG
CGAAATCGGTTCTGAAAAAGCCGGTACAGAAGATAACAATGGCGGCCGAAACAAATTCAAGAAAGTCGAAATGCCGGTCTTCAATGGCGAAGATCTCGACTTATGGTTGT
TCTGCGCGGAAAGGTACTTTCAACTTCATGAACTTAGTGAATCCGGGAACATGGTAGTATCGACCATTAGTTTCGAAGGTCCAACATTAAACTGGTACCAATCACAAGAG
GAGAGAGATAAGTTTCTACTCTGGGCAAACTTGAAGGAGTGA
Protein sequenceShow/hide protein sequence
METAAKERSMMSERLLESMMRESPLTNMKENEPSSSREIGSEKAGTEDNNGGRNKFKKVEMPVFNGEDLDLWLFCAERYFQLHELSESGNMVVSTISFEGPTLNWYQSQE
ERDKFLLWANLKE