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IVF0024587 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024587
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchr02:6537982..6538218
RNA-Seq ExpressionIVF0024587
SyntenyIVF0024587
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033316.1 transcription factor bHLH36-like [Cucumis melo var. makuwa]4.34e-0783.33Show/hide
Query:  RYGSPSPRRKDVEMRRIGLRLGFSSCVIHR
        RYGSP  RRKD+EMRRIGLRLGFS CVI R
Subjt:  RYGSPSPRRKDVEMRRIGLRLGFSSCVIHR
KAA0034002.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]8.19e-1166.67Show/hide
Query:  RYGSPSPRRKDVEMRRIGLRLGFSSCVIHRDFE-----EGKWGILKKESEG
        R+GSPS RRKD+EMRR+GLRLGFSSCV+    E     EGK GILKKE+ G
Subjt:  RYGSPSPRRKDVEMRRIGLRLGFSSCVIHRDFE-----EGKWGILKKESEG
TrEMBL top hitse value%identityAlignment
A0A5A7STJ5 Transcription factor bHLH36-like3.4e-0483.33Show/hide
Query:  RYGSPSPRRKDVEMRRIGLRLGFSSCVIHR
        RYGSP  RRKD+EMRRIGLRLGFS CVI R
Subjt:  RYGSPSPRRKDVEMRRIGLRLGFSSCVIHR
A0A5D3BST2 CACTA en-spm transposon protein1.9e-0764.71Show/hide
Query:  RYGSPSPRRKDVEMRRIGLRLGFSSCVI-----HRDFEEGKWGILKKESEG
        R+GSPS RRKD+EMRR+GLRLGFSSCV+         +EGK GILKKE+ G
Subjt:  RYGSPSPRRKDVEMRRIGLRLGFSSCVI-----HRDFEEGKWGILKKESEG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAATGAAAGATCAAGAACTCACTGGCAACGATATGGGTCTCCGTCGCCGAGAAGAAAGGATGTGGAGATGAGAAGAATTGGGTTAAGGTTGGGGTTTTCGTCGTG
CGTCATTCATAGGGATTTTGAAGAAGGAAAGTGGGGGATTTTGAAGAAGGAAAGTGAGGGATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAATGAAAGATCAAGAACTCACTGGCAACGATATGGGTCTCCGTCGCCGAGAAGAAAGGATGTGGAGATGAGAAGAATTGGGTTAAGGTTGGGGTTTTCGTCGTG
CGTCATTCATAGGGATTTTGAAGAAGGAAAGTGGGGGATTTTGAAGAAGGAAAGTGAGGGATTTTAA
Protein sequenceShow/hide protein sequence
MKNERSRTHWQRYGSPSPRRKDVEMRRIGLRLGFSSCVIHRDFEEGKWGILKKESEGF