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IVF0024597 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024597
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr07:2917337..2917507
RNA-Seq ExpressionIVF0024597
SyntenyIVF0024597
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040602.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.68e-2692.86Show/hide
Query:  MDMDVAMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRVDVDNQLEIDDV
        MD DVAMGNI NICIMKHLQMYQIDKSTNKNQRTKRTENNIE RVDV+NQLEIDDV
Subjt:  MDMDVAMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRVDVDNQLEIDDV

KAA0041168.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]6.15e-2292.16Show/hide
Query:  AMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRVDVDNQLEIDDV
        A+GNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRV+VDNQL+ID+V
Subjt:  AMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRVDVDNQLEIDDV

KAA0065673.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]4.36e-1895.12Show/hide
Query:  MDMDVAMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNI
        MDMDV MGNITNICIMKHLQMYQIDKSTNKNQRTKRTEN+I
Subjt:  MDMDVAMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNI

KAA0066693.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]8.49e-30100Show/hide
Query:  MDMDVAMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRVDVDNQLEIDDV
        MDMDVAMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRVDVDNQLEIDDV
Subjt:  MDMDVAMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRVDVDNQLEIDDV

TYK08229.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]4.81e-1895.12Show/hide
Query:  MDMDVAMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNI
        MDMDV MGNITNICIMKHLQMYQIDKSTNKNQRTKRTEN+I
Subjt:  MDMDVAMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNI

TrEMBL top hitse value%identityAlignment
A0A5A7TDY5 Serine/threonine-protein phosphatase 7 long form-like protein4.4e-1792.16Show/hide
Query:  AMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRVDVDNQLEIDDV
        A+GNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRV+VDNQL+ID+V
Subjt:  AMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRVDVDNQLEIDDV

A0A5A7VBU8 GATA zinc finger domain-containing protein 10-like isoform X21.9e-1295.12Show/hide
Query:  MDMDVAMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNI
        MDMDV MGNITNICIMKHLQMYQIDKSTNKNQRTKRTEN+I
Subjt:  MDMDVAMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNI

A0A5A7VF64 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.0e-21100Show/hide
Query:  MDMDVAMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRVDVDNQLEIDDV
        MDMDVAMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRVDVDNQLEIDDV
Subjt:  MDMDVAMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRVDVDNQLEIDDV

A0A5D3C2V9 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.7e-1992.86Show/hide
Query:  MDMDVAMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRVDVDNQLEIDDV
        MD DVAMGNI NICIMKHLQMYQIDKSTNKNQRTKRTENNIE RVDV+NQLEIDDV
Subjt:  MDMDVAMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRVDVDNQLEIDDV

A0A5D3CD18 GATA zinc finger domain-containing protein 10-like isoform X21.9e-1295.12Show/hide
Query:  MDMDVAMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNI
        MDMDV MGNITNICIMKHLQMYQIDKSTNKNQRTKRTEN+I
Subjt:  MDMDVAMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATGGACGTGGCTATGGGAAACATAACGAATATCTGTATCATGAAGCACCTGCAGATGTATCAGATCGATAAGAGTACCAACAAGAACCAGAGAACCAAGAGGAC
CGAGAACAACATAGAGTTCAGAGTCGACGTCGACAACCAGCTCGAAATCGACGACGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACATGGACGTGGCTATGGGAAACATAACGAATATCTGTATCATGAAGCACCTGCAGATGTATCAGATCGATAAGAGTACCAACAAGAACCAGAGAACCAAGAGGAC
CGAGAACAACATAGAGTTCAGAGTCGACGTCGACAACCAGCTCGAAATCGACGACGTCTGA
Protein sequenceShow/hide protein sequence
MDMDVAMGNITNICIMKHLQMYQIDKSTNKNQRTKRTENNIEFRVDVDNQLEIDDV