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IVF0024620 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024620
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionProtein transport protein SEC61 gamma subunit
Genome locationchr06:14107432..14108939
RNA-Seq ExpressionIVF0024620
SyntenyIVF0024620
Gene Ontology termsGO:0006605 - protein targeting (biological process)
GO:0071806 - protein transmembrane transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
InterPro domainsIPR023391 - Protein translocase SecE domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8530099.1 hypothetical protein F0562_004808 [Nyssa sinensis]5.09e-1296.88Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKG
        MDA+DSVFDPLREFAKDSVRLVKRCHKPDRKG
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKG

MBA0819002.1 hypothetical protein [Gossypium harknessii]5.76e-12100Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRK
        MDAIDSVFDPLREFAKDSVRLVKRCHKPDRK
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRK

VAH06259.1 unnamed protein product [Triticum turgidum subsp. durum]6.56e-1263.08Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTSSQRSRFVQRLASSSWDSLVFSSSSSLSPSIT
        MDAIDSV DPLREFAKDSVRLVKRCHKPDRKG         QRLA +  D + F     LSP +T
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTSSQRSRFVQRLASSSWDSLVFSSSSSLSPSIT

VAI19780.1 unnamed protein product [Triticum turgidum subsp. durum]8.16e-1361.54Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTSSQRSRFVQRLASSSWDSLVFSSSSSLSPSIT
        MDA+DSV DPLREFAKDSVRLVKRCHKPDRKG         QRLA +  D ++F     LSP +T
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTSSQRSRFVQRLASSSWDSLVFSSSSSLSPSIT

VAI92800.1 unnamed protein product [Triticum turgidum subsp. durum]2.79e-1291.43Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTSS
        MDA+DSV DPLREFAKDSVRLVKRCHKPDRKG SS
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTSS

TrEMBL top hitse value%identityAlignment
A0A0A0LXS8 Uncharacterized protein2.4e-4693.1Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTSSQRSRFVQRLASSSWDSLVFSSSSSLSPSITSSSDLA---RPQKEQAGQYRR-ELDQLFQILTNVF
        MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTSSQRSRFVQRLASSSWDSLV SSSSSLSPSITSSSDLA   RPQKEQAGQYRR ELDQLFQILTNV 
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTSSQRSRFVQRLASSSWDSLVFSSSSSLSPSITSSSDLA---RPQKEQAGQYRR-ELDQLFQILTNVF

Query:  INFKSLIYFLEKYQTP
        IN KSLIYFLEKY+TP
Subjt:  INFKSLIYFLEKYQTP

A0A446T8U2 Uncharacterized protein3.9e-0961.54Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTSSQRSRFVQRLASSSWDSLVFSSSSSLSPSIT
        MDA+DSV DPLREFAKDSVRLVKRCHKPDRKG         QRLA +  D ++F     LSP +T
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTSSQRSRFVQRLASSSWDSLVFSSSSSLSPSIT

A0A446YW31 Uncharacterized protein1.5e-0891.43Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTSS
        MDA+DSV DPLREFAKDSVRLVKRCHKPDRKG SS
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTSS

A0A5J5AIQ6 Uncharacterized protein1.5e-0896.88Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKG
        MDA+DSVFDPLREFAKDSVRLVKRCHKPDRKG
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKG

K3Y480 Uncharacterized protein4.6e-1050.46Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTS---------SQRSRFV----------------------------QRLASSSWDSLVFSSSSSLSPS
        MDAIDSV DPLR+FAKDSVRLVKRCHKPDRKGT          S  SRFV                            +R  SSSW S   SSSSS SPS
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTS---------SQRSRFV----------------------------QRLASSSWDSLVFSSSSSLSPS

Query:  ITSSSDLAR
          SSS  AR
Subjt:  ITSSSDLAR

SwissProt top hitse value%identityAlignment
P0DI74 Protein transport protein Sec61 subunit gamma-12.2e-0990.32Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRK
        MDAIDSV DPLR+FAKDS+RLVKRCHKPDRK
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRK

P0DI75 Protein transport protein Sec61 subunit gamma-22.2e-0990.32Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRK
        MDAIDSV DPLR+FAKDS+RLVKRCHKPDRK
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRK

P38385 Protein transport protein Sec61 subunit gamma1.0e-0993.55Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRK
        MDA+DSV DPLREFAKDSVRLVKRCHKPDRK
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRK

Q7Z1B8 Protein transport protein Sec61 subunit gamma2.1e-0464.52Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRK
        MD +    +P R+FAKDS+RLVKRC KPDRK
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRK

Q9SMP2 Protein transport protein Sec61 subunit gamma-31.6e-0780.65Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRK
        M+AIDS  DPLR+FAK SVRLV+RCHKPDRK
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRK

Arabidopsis top hitse value%identityAlignment
AT3G48570.1 secE/sec61-gamma protein transport protein1.1e-0880.65Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRK
        M+AIDS  DPLR+FAK SVRLV+RCHKPDRK
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRK

AT4G24920.1 secE/sec61-gamma protein transport protein1.6e-1090.32Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRK
        MDAIDSV DPLR+FAKDS+RLVKRCHKPDRK
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRK

AT5G50460.1 secE/sec61-gamma protein transport protein1.6e-1090.32Show/hide
Query:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRK
        MDAIDSV DPLR+FAKDS+RLVKRCHKPDRK
Subjt:  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCATTGATTCCGTCTTCGATCCACTCCGGGAGTTCGCTAAGGATAGCGTACGTCTCGTCAAGCGCTGTCACAAACCCGATCGCAAAGGTACAAGTTCACAAAG
GTCGCGGTTCGTACAGCGATTGGCTTCGTCGTCATGGGATTCGTTGGTTTTTTCGTCAAGCTCATCTTTATCCCCATCAATAACATCATCGTCGGATCTGGCTAGGCCAC
AAAAGGAGCAGGCCGGACAATATAGAAGGGAACTTGATCAACTATTTCAAATTCTTACCAATGTTTTTATTAATTTTAAAAGCTTAATTTATTTTCTAGAGAAGTACCAA
ACTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGCCATTGATTCCGTCTTCGATCCACTCCGGGAGTTCGCTAAGGATAGCGTACGTCTCGTCAAGCGCTGTCACAAACCCGATCGCAAAGGTACAAGTTCACAAAG
GTCGCGGTTCGTACAGCGATTGGCTTCGTCGTCATGGGATTCGTTGGTTTTTTCGTCAAGCTCATCTTTATCCCCATCAATAACATCATCGTCGGATCTGGCTAGGCCAC
AAAAGGAGCAGGCCGGACAATATAGAAGGGAACTTGATCAACTATTTCAAATTCTTACCAATGTTTTTATTAATTTTAAAAGCTTAATTTATTTTCTAGAGAAGTACCAA
ACTCCATGA
Protein sequenceShow/hide protein sequence
MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKGTSSQRSRFVQRLASSSWDSLVFSSSSSLSPSITSSSDLARPQKEQAGQYRRELDQLFQILTNVFINFKSLIYFLEKYQ
TP