; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0024624 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024624
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr11:26786015..26786326
RNA-Seq ExpressionIVF0024624
SyntenyIVF0024624
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057475.1 uncharacterized protein E6C27_scaffold280G003560 [Cucumis melo var. makuwa]2.04e-4074.76Show/hide
Query:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNPVTAVIQGKP
        M  +VALQLMGFNT  D+WEAIQ LFG++SR EE F RHTFQTT++GN KMEDYL IMK N  NL QAGS VP   LISQVLL LDEVYNPVTAVIQGKP
Subjt:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNPVTAVIQGKP

Query:  NIS
        +IS
Subjt:  NIS

KAA0060208.1 Integrase, catalytic core [Cucumis melo var. makuwa]2.37e-3780.22Show/hide
Query:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNP
        MT EVA QLMGFNT  D+ EAIQ LFGVQSR EEDF RHTFQTT+KGNSKMEDYL IMKTN  NL QAGS +PL SLISQVLL LDEVYNP
Subjt:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNP

KGN44003.1 hypothetical protein Csa_016232 [Cucumis sativus]1.67e-4582.29Show/hide
Query:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNPVTAVI
        MT EVALQLMGFNT  D+WEAIQ LFGVQ R EEDF RHTFQTTQKGNSKMEDYL  MKTN  NLDQAGS VPL SLISQV+L LDE+YNPVTAVI
Subjt:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNPVTAVI

XP_031739914.1 uncharacterized protein LOC116403326 isoform X1 [Cucumis sativus]7.23e-4071.84Show/hide
Query:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNPVTAVIQGKP
        MT+EVA +LMGF      WEA  +LFGVQSR EEDF R TFQTT+KG+ KMEDYLC+MKTN  NL QAGSLVP C+LISQVLL LDEVYN V  VIQGK 
Subjt:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNPVTAVIQGKP

Query:  NIS
        NIS
Subjt:  NIS

XP_031739915.1 uncharacterized protein LOC116403326 isoform X2 [Cucumis sativus]6.09e-4071.84Show/hide
Query:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNPVTAVIQGKP
        MT+EVA +LMGF      WEA  +LFGVQSR EEDF R TFQTT+KG+ KMEDYLC+MKTN  NL QAGSLVP C+LISQVLL LDEVYN V  VIQGK 
Subjt:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNPVTAVIQGKP

Query:  NIS
        NIS
Subjt:  NIS

TrEMBL top hitse value%identityAlignment
A0A0A0K3F9 Uncharacterized protein2.1e-3382.29Show/hide
Query:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNPVTAVI
        MT EVALQLMGFNT  D+WEAIQ LFGVQ R EEDF RHTFQTTQKGNSKMEDYL  MKTN  NLDQAGS VPL SLISQV+L LDE+YNPVTAVI
Subjt:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNPVTAVI

A0A0A0LXB7 Uncharacterized protein7.7e-2866.99Show/hide
Query:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNPVTAVIQGKP
        +T EV +QL+GF    D+WEA    FGV+SR EEDF R TFQTT+KGNS MEDYL IMKTN  NL QA S +P  +LISQVLL LDEVYNPV  VIQGKP
Subjt:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNPVTAVIQGKP

Query:  NIS
         IS
Subjt:  NIS

A0A5A7SIT7 Uncharacterized protein7.7e-2866.02Show/hide
Query:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNPVTAVIQGKP
        MT +VA+QLMGF    D+W+A Q  FGVQSR EEDF R   QTT+KGN+KME+YL +MKTN  NL Q GS VP  +LISQVLL LDEVYN V  VIQGKP
Subjt:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNPVTAVIQGKP

Query:  NIS
        +IS
Subjt:  NIS

A0A5A7UY76 Integrase, catalytic core1.1e-2980.22Show/hide
Query:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNP
        MT EVA QLMGFNT  D+ EAIQ LFGVQSR EEDF RHTFQTT+KGNSKMEDYL IMKTN  NL QAGS +PL SLISQVLL LDEVYNP
Subjt:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNP

A0A5D3E3L7 Uncharacterized protein4.0e-3274.76Show/hide
Query:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNPVTAVIQGKP
        M  +VALQLMGFNT  D+WEAIQ LFG++SR EE F RHTFQTT++GN KMEDYL IMK N  NL QAGS VP   LISQVLL LDEVYNPVTAVIQGKP
Subjt:  MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNPVTAVIQGKP

Query:  NIS
        +IS
Subjt:  NIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGTGGAAGTGGCTCTTCAACTGATGGGGTTTAACACAACAAATGACATATGGGAAGCCATACAATATTTATTTGGAGTACAATCAAGGACAGAGGAAGATTTTTT
CAGGCACACGTTTCAGACTACCCAAAAAGGTAATTCTAAGATGGAAGATTATTTGTGCATTATGAAAACTAACACTGCCAACCTCGACCAGGCCGGGAGTCTTGTTCCTC
TCTGTTCCTTAATTTCTCAGGTCTTATTGAGGTTGGATGAAGTCTACAATCCTGTAACCGCTGTTATTCAGGGAAAACCCAACATCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGTGGAAGTGGCTCTTCAACTGATGGGGTTTAACACAACAAATGACATATGGGAAGCCATACAATATTTATTTGGAGTACAATCAAGGACAGAGGAAGATTTTTT
CAGGCACACGTTTCAGACTACCCAAAAAGGTAATTCTAAGATGGAAGATTATTTGTGCATTATGAAAACTAACACTGCCAACCTCGACCAGGCCGGGAGTCTTGTTCCTC
TCTGTTCCTTAATTTCTCAGGTCTTATTGAGGTTGGATGAAGTCTACAATCCTGTAACCGCTGTTATTCAGGGAAAACCCAACATCTCTTGA
Protein sequenceShow/hide protein sequence
MTVEVALQLMGFNTTNDIWEAIQYLFGVQSRTEEDFFRHTFQTTQKGNSKMEDYLCIMKTNTANLDQAGSLVPLCSLISQVLLRLDEVYNPVTAVIQGKPNIS