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IVF0024636 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024636
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr07:8434257..8434442
RNA-Seq ExpressionIVF0024636
SyntenyIVF0024636
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038275.1 retrotransposon protein [Cucumis melo var. makuwa]2.83e-2883.61Show/hide
Query:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSMFTE
        M CCL+HNLINRE+TYI ELDDEDDGDS HATT+GDDI  I+PSNEWT+WRDALASSMFTE
Subjt:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSMFTE

KAA0048149.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.36e-2883.61Show/hide
Query:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSMFTE
        M CCL+HNLINREM+YI ELDDEDDGDS HATT+GDDI  I+PSNEWT+WRDALASSMFTE
Subjt:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSMFTE

KAA0064184.1 retrotransposon protein [Cucumis melo var. makuwa]2.17e-33100Show/hide
Query:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSM
        MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSM
Subjt:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSM

TYK02845.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.98e-38100Show/hide
Query:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSMFTE
        MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSMFTE
Subjt:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSMFTE

XP_008444024.1 PREDICTED: uncharacterized protein LOC103487473 [Cucumis melo]2.29e-2883.61Show/hide
Query:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSMFTE
        M CCL+HNLINRE+TYI ELDDEDDGDS HATT+GDDI  I+PSNEWT+WRDALASSMFTE
Subjt:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSMFTE

TrEMBL top hitse value%identityAlignment
A0A1S3B9E4 uncharacterized protein LOC1034874733.8e-2283.61Show/hide
Query:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSMFTE
        M CCL+HNLINRE+TYI ELDDEDDGDS HATT+GDDI  I+PSNEWT+WRDALASSMFTE
Subjt:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSMFTE

A0A5A7TA66 Retrotransposon protein3.8e-2283.61Show/hide
Query:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSMFTE
        M CCL+HNLINRE+TYI ELDDEDDGDS HATT+GDDI  I+PSNEWT+WRDALASSMFTE
Subjt:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSMFTE

A0A5A7U3X6 Putative nuclease HARBI12.9e-2283.61Show/hide
Query:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSMFTE
        M CCL+HNLINREM+YI ELDDEDDGDS HATT+GDDI  I+PSNEWT+WRDALASSMFTE
Subjt:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSMFTE

A0A5A7VAC3 Retrotransposon protein2.5e-26100Show/hide
Query:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSM
        MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSM
Subjt:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSM

A0A5D3BUR6 Putative nuclease HARBI13.5e-28100Show/hide
Query:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSMFTE
        MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSMFTE
Subjt:  MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSMFTE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTGTTGTCTCATTCATAATTTAATAAATCGGGAGATGACTTACATTGTAGAATTGGATGACGAAGATGATGGTGACTCGAAACATGCAACTACTACTGGGGACGA
CATCATATGCATTAAGCCCTCAAACGAATGGACTAAATGGCGTGATGCGCTTGCTTCGTCAATGTTCACAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTTGTTGTCTCATTCATAATTTAATAAATCGGGAGATGACTTACATTGTAGAATTGGATGACGAAGATGATGGTGACTCGAAACATGCAACTACTACTGGGGACGA
CATCATATGCATTAAGCCCTCAAACGAATGGACTAAATGGCGTGATGCGCTTGCTTCGTCAATGTTCACAGAATGA
Protein sequenceShow/hide protein sequence
MTCCLIHNLINREMTYIVELDDEDDGDSKHATTTGDDIICIKPSNEWTKWRDALASSMFTE