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IVF0024657 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024657
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Genome locationchr08:14470800..14471117
RNA-Seq ExpressionIVF0024657
SyntenyIVF0024657
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051899.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.78e-0439.58Show/hide
Query:  SINMVSNRGPSNHSSQGQGQGEGRGN--NSPMEIMVIVVDNLEGKAEAEDDIVQLTKFVEKTRHTADVYYNRFYKEFVSNNGNNPNKGTNNNNFKN
        S+N VSNRG SNH+ QG       GN  N+  +          G+  +        +   K  HT D+ YNRF K+FV N+G N NKGT NN F+N
Subjt:  SINMVSNRGPSNHSSQGQGQGEGRGN--NSPMEIMVIVVDNLEGKAEAEDDIVQLTKFVEKTRHTADVYYNRFYKEFVSNNGNNPNKGTNNNNFKN
TYJ99887.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.78e-0439.58Show/hide
Query:  SINMVSNRGPSNHSSQGQGQGEGRGN--NSPMEIMVIVVDNLEGKAEAEDDIVQLTKFVEKTRHTADVYYNRFYKEFVSNNGNNPNKGTNNNNFKN
        S+N VSNRG SNH+ QG       GN  N+  +          G+  +        +   K  HT D+ YNRF K+FV N+G N NKGT NN F+N
Subjt:  SINMVSNRGPSNHSSQGQGQGEGRGN--NSPMEIMVIVVDNLEGKAEAEDDIVQLTKFVEKTRHTADVYYNRFYKEFVSNNGNNPNKGTNNNNFKN
TYK02409.1 putative Ty1-copia-like retrotransposon [Cucumis melo var. makuwa]2.20e-1146.6Show/hide
Query:  NTPSINMVSNRGPSNHSS-----QGQGQGEG-RGNNSPMEIMVIVVDNLEGKAEAEDDIVQLTKFVEKTRHTADVYYNRFYKEFVSNNGNNPNKGTNNNN
        NT ++NMVSNRGPSNHSS     +G     G RGNN             + K           +   K  +  DV YNRF KEF  NNGNNPNKGTNNN+
Subjt:  NTPSINMVSNRGPSNHSS-----QGQGQGEG-RGNNSPMEIMVIVVDNLEGKAEAEDDIVQLTKFVEKTRHTADVYYNRFYKEFVSNNGNNPNKGTNNNN

Query:  FKN
        FKN
Subjt:  FKN
TYK19804.1 hypothetical protein E5676_scaffold307G00340 [Cucumis melo var. makuwa]1.73e-18100Show/hide
Query:  SPMEIMVIVVDNLEGKAEAEDDIVQLTKFVEKTRHTADVYYN
        SPMEIMVIVVDNLEGKAEAEDDIVQLTKFVEKTRHTADVYYN
Subjt:  SPMEIMVIVVDNLEGKAEAEDDIVQLTKFVEKTRHTADVYYN
TrEMBL top hitse value%identityAlignment
A0A5D3BWB6 Putative Ty1-copia-like retrotransposon2.4e-0846.6Show/hide
Query:  NTPSINMVSNRGPSNHSS-----QGQGQGEG-RGNNSPMEIMVIVVDNLEGKAEAEDDIVQLTKFVEKTRHTADVYYNRFYKEFVSNNGNNPNKGTNNNN
        NT ++NMVSNRGPSNHSS     +G     G RGNN             + K           +   K  +  DV YNRF KEF  NNGNNPNKGTNNN+
Subjt:  NTPSINMVSNRGPSNHSS-----QGQGQGEG-RGNNSPMEIMVIVVDNLEGKAEAEDDIVQLTKFVEKTRHTADVYYNRFYKEFVSNNGNNPNKGTNNNN

Query:  FKN
        FKN
Subjt:  FKN
A0A5D3D8B7 Uncharacterized protein2.5e-1384.62Show/hide
Query:  SPMEIMVIVVDNLEGKAEAEDDIVQLTKFVEKTRHTADVYYNRFYKEFVSNN
        SPMEIMVIVVDNLEGKAEAEDDIVQLTKFVEKTRHTADVYYN      V+ N
Subjt:  SPMEIMVIVVDNLEGKAEAEDDIVQLTKFVEKTRHTADVYYNRFYKEFVSNN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTGAAGAATACTCCATCTATCAATATGGTAAGTAACAGGGGACCCTCTAACCATTCATCACAAGGTCAAGGTCAAGGTGAAGGTCGAGGAAATAATTCTCCTAT
GGAAATCATGGTAATAGTGGTGGACAATCTGGAGGGCAAGGCTGAGGCTGAGGATGATATCGTCCAACTTACCAAGTTTGTGGAAAAAACAAGGCACACTGCAGATGTTT
ACTACAATAGGTTCTACAAGGAGTTTGTTTCCAATAATGGAAATAATCCAAACAAAGGGACAAACAACAACAATTTTAAGAACCCACGACTTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTGAAGAATACTCCATCTATCAATATGGTAAGTAACAGGGGACCCTCTAACCATTCATCACAAGGTCAAGGTCAAGGTGAAGGTCGAGGAAATAATTCTCCTAT
GGAAATCATGGTAATAGTGGTGGACAATCTGGAGGGCAAGGCTGAGGCTGAGGATGATATCGTCCAACTTACCAAGTTTGTGGAAAAAACAAGGCACACTGCAGATGTTT
ACTACAATAGGTTCTACAAGGAGTTTGTTTCCAATAATGGAAATAATCCAAACAAAGGGACAAACAACAACAATTTTAAGAACCCACGACTTTTATGA
Protein sequenceShow/hide protein sequence
MAVKNTPSINMVSNRGPSNHSSQGQGQGEGRGNNSPMEIMVIVVDNLEGKAEAEDDIVQLTKFVEKTRHTADVYYNRFYKEFVSNNGNNPNKGTNNNNFKNPRLL