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IVF0024661 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024661
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibosome biogenesis NEP1-like protein
Genome locationchr11:29596060..29597282
RNA-Seq ExpressionIVF0024661
SyntenyIVF0024661
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33694.1 hypothetical protein [Cucumis melo subsp. melo]4.75e-9198.01Show/hide
Query:  MLVGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITS
        MLVGTRIQGNRRFASSTTAPSANASSSS SSSSKGGSG SEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITS
Subjt:  MLVGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITS

Query:  ADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
        ADKFINKSFLRKVAHIQDDTKTLPDPVH DPFTRPRNAETLKTAGVDPTRR
Subjt:  ADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
KAA0039866.1 putative Ribosome biogenesis protein NEP1-like [Cucumis melo var. makuwa]9.25e-96100Show/hide
Query:  MLVGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITS
        MLVGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITS
Subjt:  MLVGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITS

Query:  ADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
        ADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
Subjt:  ADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
XP_004140656.2 uncharacterized protein LOC101206372 [Cucumis sativus]1.66e-9591.07Show/hide
Query:  MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSAN--ASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKK
        M LFRTSLANKMWKSMLV TRIQGNRRF+SSTT PSAN   ++SS SSSS GGSG SEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKK
Subjt:  MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSAN--ASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKK

Query:  KRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
        KRESIPEVEDPDTVITSADKFINKSFLRKVAHIQ DTKTL DPVHPDPFTRPRNAETLKTAG+DPTRR
Subjt:  KRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
XP_008459927.1 PREDICTED: uncharacterized protein LOC103498899 [Cucumis melo]2.93e-10298.19Show/hide
Query:  MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKR
        MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSANASSSS SSSSKGGSG SEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKR
Subjt:  MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKR

Query:  ESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
        ESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTKTLPDPVH DPFTRPRNAETLKTAGVDPTRR
Subjt:  ESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
XP_038906484.1 uncharacterized protein LOC120092464 [Benincasa hispida]9.31e-8983.63Show/hide
Query:  MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSAN-----ASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNC
        M+LF TSL NK+WK+MLVG+RIQG RR ASSTTAP+AN     +SSSSSSSSSKGGS  SEYMKGEYAPIYIV+GMVAV VSI THTAKQQLLHSP+VN 
Subjt:  MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSAN-----ASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNC

Query:  SKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
        SKKKRESIPEV+DPDT+I SA+KFINKSFLRKVAHIQ+DTKTLPDPVHP+PFTRPRNAETLKTAGVDPTRR
Subjt:  SKKKRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
TrEMBL top hitse value%identityAlignment
A0A0A0KC39 Uncharacterized protein1.5e-7391.07Show/hide
Query:  MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSAN--ASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKK
        M LFRTSLANKMWKSMLV TRIQGNRRF+SSTT PSAN   ++SS SSSS GGSG SEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKK
Subjt:  MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSAN--ASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKK

Query:  KRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
        KRESIPEVEDPDTVITSADKFINKSFLRKVAHIQ DTKTL DPVHPDPFTRPRNAETLKTAG+DPTRR
Subjt:  KRESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
A0A1S3CBE5 uncharacterized protein LOC1034988991.6e-7898.19Show/hide
Query:  MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKR
        MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSANA SSSSSSSSKGGSG SEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKR
Subjt:  MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKR

Query:  ESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
        ESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTKTLPDPVH DPFTRPRNAETLKTAGVDPTRR
Subjt:  ESIPEVEDPDTVITSADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
A0A5D3DLZ1 Putative Ribosome biogenesis protein NEP1-like1.5e-73100Show/hide
Query:  MLVGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITS
        MLVGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITS
Subjt:  MLVGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITS

Query:  ADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
        ADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
Subjt:  ADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
A0A6J1D5I0 uncharacterized protein LOC111017496 isoform X11.3e-5378.85Show/hide
Query:  KMWKSMLVG--TRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVED
        K+WKSMLVG  +RI+G R FASSTTA        SSSSSSK     SEYMKGEYAPIYIVMGMV V V+I THTAKQQLLHSP+V  SKKKRESIPEV+D
Subjt:  KMWKSMLVG--TRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVED

Query:  PDTVITSADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPT
        PDTVITSADKF+NKSFLRKVAHIQD  KTL DP HPDPFTRPRNAETLKTAGVDPT
Subjt:  PDTVITSADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPT
E5GB52 Uncharacterized protein7.7e-7098.01Show/hide
Query:  MLVGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITS
        MLVGTRIQGNRRFASSTTAPSANA SSSSSSSSKGGSG SEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITS
Subjt:  MLVGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITS

Query:  ADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
        ADKFINKSFLRKVAHIQDDTKTLPDPVH DPFTRPRNAETLKTAGVDPTRR
Subjt:  ADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G63060.1 unknown protein3.0e-2645.58Show/hide
Query:  VGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSAD
        VG +  G+RRFA +T A  A  + +  S            + GE+AP+ I+ G V + V +A H+ KQQL+H+P ++  K +R ++ EV+DP+  ++SAD
Subjt:  VGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSAD

Query:  KFINKSFLRKVAHIQDDTKT-LPDPVHPDPFTRPRNAETLKTAGVDP
        KFINKS+LRKV  IQD +K  L DP  P+PFT PRNAETL + GV P
Subjt:  KFINKSFLRKVAHIQDDTKT-LPDPVHPDPFTRPRNAETLKTAGVDP
AT5G07330.1 unknown protein1.2e-1935.86Show/hide
Query:  IQGNRRFASSTTAPSANA-SSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFI
        +Q  R +  +TT P + A S++++    +  +  +   KG++ P+Y+ +G++++ V+   +TA   L  +P V  +KK RE++PE+EDPD V+  AD+F 
Subjt:  IQGNRRFASSTTAPSANA-SSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPDTVITSADKFI

Query:  NKSFLRKVAHIQ--DDTKTLPDPVHPDPFTRPRNAETLKTAGVDP
        N+S+ RK+AH+Q  D    + DP+  D F     A TLK  GVDP
Subjt:  NKSFLRKVAHIQ--DDTKTLPDPVHPDPFTRPRNAETLKTAGVDP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTATTCAGAACCTCTCTCGCAAATAAGATGTGGAAATCAATGCTTGTTGGAACTAGGATCCAAGGGAACCGTCGTTTCGCTTCATCCACTACAGCCCCATCTGC
CAATGCTTCTTCTTCTTCTTCTTCTTCTTCTTCGAAGGGTGGTTCCGGGGAGAGCGAGTACATGAAAGGCGAGTACGCCCCAATCTACATTGTGATGGGAATGGTGGCAG
TGGTTGTGTCTATCGCAACCCACACGGCGAAGCAACAACTGCTGCATTCGCCGATGGTTAACTGTAGCAAGAAGAAGAGGGAGAGCATTCCGGAGGTCGAGGACCCCGAC
ACCGTCATCACTTCTGCTGACAAATTTATTAACAAATCCTTTCTTAGGAAGGTTGCTCACATTCAGGATGACACCAAGACGTTACCCGATCCAGTTCATCCCGACCCATT
TACCAGGCCACGTAATGCAGAAACTCTGAAAACTGCTGGAGTTGACCCTACCCGCCGTTGA
mRNA sequenceShow/hide mRNA sequence
CCAACCTTTATATATCTCAATCATTCAAACCTCCCTATTTCGTAATTGAACTTCTGAAATCCCACAAAAGAAAATGAGTTTATTCAGAACCTCTCTCGCAAATAAGATGT
GGAAATCAATGCTTGTTGGAACTAGGATCCAAGGGAACCGTCGTTTCGCTTCATCCACTACAGCCCCATCTGCCAATGCTTCTTCTTCTTCTTCTTCTTCTTCTTCGAAG
GGTGGTTCCGGGGAGAGCGAGTACATGAAAGGCGAGTACGCCCCAATCTACATTGTGATGGGAATGGTGGCAGTGGTTGTGTCTATCGCAACCCACACGGCGAAGCAACA
ACTGCTGCATTCGCCGATGGTTAACTGTAGCAAGAAGAAGAGGGAGAGCATTCCGGAGGTCGAGGACCCCGACACCGTCATCACTTCTGCTGACAAATTTATTAACAAAT
CCTTTCTTAGGAAGGTTGCTCACATTCAGGATGACACCAAGACGTTACCCGATCCAGTTCATCCCGACCCATTTACCAGGCCACGTAATGCAGAAACTCTGAAAACTGCT
GGAGTTGACCCTACCCGCCGTTGAATAACAACTATGATATGGAAAAAACTTGGATGCTTTCTACAATGCACTAATCATATTGTTCTTAATTATATTAGTTTTTGTTGGTG
ATATGTGTATTGTTGTGTGTGTATATTTATTTAAAGCCCTTCTCTACTTAATTATGCTTTTCTCTTCACTTTTTTTTTTTTGTATTGACTGTCAAGCTTCTTCAAAAGTA
GAAGTACTACTAGCTACTGCTAGGGAATTTAGCCCCCTTATATAACTTGTTCTTTTAATCTTCTTTTCCGGACAATAAAGCAAATTTAATTGGAATA
Protein sequenceShow/hide protein sequence
MSLFRTSLANKMWKSMLVGTRIQGNRRFASSTTAPSANASSSSSSSSSKGGSGESEYMKGEYAPIYIVMGMVAVVVSIATHTAKQQLLHSPMVNCSKKKRESIPEVEDPD
TVITSADKFINKSFLRKVAHIQDDTKTLPDPVHPDPFTRPRNAETLKTAGVDPTRR