CuGenDBv2

Gene ID	IVF0024699
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Tropomyosin-like
Genome location	chr01:1734331..1739317
RNA-Seq Expression	IVF0024699
Synteny	IVF0024699
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004136872.1 uncharacterized protein LOC101218756 isoform X1 [Cucumis sativus]

1.02e-89

98.65

Show/hide

Query:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ
        MEDKGKGTDRWSGAVANLTEMTSNLD LQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAIT+AAHARSEKRQAEAAQRAAEVHVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ

Query:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE
        EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE
Subjt:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE

XP_008455213.1 PREDICTED: uncharacterized protein LOC103495430 [Cucumis melo]

4.33e-91

100

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Query:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ
        MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ

Query:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE
        EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE
Subjt:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE

XP_022963475.1 uncharacterized protein LOC111463800 isoform X1 [Cucurbita moschata]

6.61e-86

93.24

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Query:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ
        MEDKGKGTDRWSGAVAN+TEM SNL+ LQK+L+KKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQ+AAE+HVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ

Query:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE
        EVT+ELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGG+E
Subjt:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE

XP_022988990.1 uncharacterized protein LOC111486188 [Cucurbita maxima]

1.10e-84

91.89

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Query:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ
        MEDKGKGTDRW+GAVANLTEM SNL+L QKLLLKKAVYVDDETFARASLCS+QARTIKVL+QRVETLERELDAAITAAAHARSEKRQAEAAQ+AAE+HVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ

Query:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE
        EVT+ELENTTKVFQLHMDELRAKQEEINKRD+DIKLLEAIIQTLGG++
Subjt:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE

XP_038886855.1 uncharacterized protein LOC120077075 isoform X1 [Benincasa hispida]

1.33e-85

93.92

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Query:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ
        MEDKGKGTDRWSGAVANLTEM SNL+ LQKLLLKKAVYVDDETFARASLCS+QARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAE+HVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ

Query:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE
        EVT+ELENTTKVFQLHMDELR KQEEI+KRDKDIKLLEAIIQTLGG+E
Subjt:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K2J2 Uncharacterized protein

1.3e-68

98.65

Show/hide

Query:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ
        MEDKGKGTDRWSGAVANLTEMTSNLD LQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAIT+AAHARSEKRQAEAAQRAAEVHVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ

Query:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE
        EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE
Subjt:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE

A0A1S3C1M4 uncharacterized protein LOC103495430

1.2e-69

100

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Query:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ
        MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ

Query:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE
        EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE
Subjt:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE

A0A6J1HI40 uncharacterized protein LOC111463800 isoform X1

1.0e-65

93.24

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Query:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ
        MEDKGKGTDRWSGAVAN+TEM SNL+ LQK+L+KKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQ+AAE+HVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ

Query:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE
        EVT+ELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGG+E
Subjt:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE

A0A6J1HXA5 uncharacterized protein LOC111467076 isoform X1

1.9e-64

91.89

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Query:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ
        MEDKGKGTDRWS AVAN+TEM SNL+ LQK+L+KKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQ+AAE+HVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ

Query:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE
        EVT+ELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGG++
Subjt:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE

A0A6J1JEJ3 uncharacterized protein LOC111486188

8.7e-65

91.89

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Query:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ
        MEDKGKGTDRW+GAVANLTEM SNL+L QKLLLKKAVYVDDETFARASLCS+QARTIKVL+QRVETLERELDAAITAAAHARSEKRQAEAAQ+AAE+HVQ
Subjt:  MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQ

Query:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE
        EVT+ELENTTKVFQLHMDELRAKQEEINKRD+DIKLLEAIIQTLGG++
Subjt:  EVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G64180.1 unknown protein

5.2e-54

75.84

Show/hide

Query:  MEDKGKGTD-RWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHV
        ME++  G+D RW G++ N+TEM SNLD LQKLLLKKAV+V+++TF+RASL SEQARTIKVLEQRV+TLERELDAAITAAAHARSEKRQAE++Q+AAE   
Subjt:  MEDKGKGTD-RWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHV

Query:  QEVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE
        Q+VTKELENTTKVF+LHM+ELR  QE+I+KRD +IKLLEAIIQTLGG+E
Subjt:  QEVTKELENTTKVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAGGACAAGGGCAAAGGAACGGACAGATGGAGCGGCGCCGTTGCCAATCTCACAGAGATGACCTCCAACCTCGACTTACTCCAGAAGCTTTTACTGAAGAAAGCCGT
CTATGTAGACGACGAGACGTTTGCCAGAGCTTCTTTGTGCTCCGAACAAGCAAGGACGATCAAGGTTCTTGAACAAAGGGTTGAGACTTTGGAAAGGGAACTTGATGCTG
CTATCACCGCTGCGGCTCATGCTCGTTCAGAAAAACGTCAAGCAGAGGCAGCACAAAGAGCTGCTGAAGTACATGTACAGGAGGTCACTAAAGAGCTCGAGAACACTACA
AAGGTATTTCAACTGCATATGGATGAATTACGCGCGAAGCAAGAAGAAATCAACAAACGTGATAAGGATATTAAGCTCTTGGAAGCAATAATTCAAACTCTTGGTGGGAG
AGAATAA

mRNA sequence

Show/hide mRNA sequence

ACGAAATGTAAGAACAAACGATAACGCGGTAAAATTGAATGCTAAACATGATCGTCGGGTGGGTTCTTACTTCTTAGCTCTCTCGCTAAGTCTCTACACGGATCATGAAG
TTCAACCATAATTGAATCGTGAATTTGCAAAACTGCAAGCGTCGGAGAAGATTCGGATCATGGAGGACAAGGGCAAAGGAACGGACAGATGGAGCGGCGCCGTTGCCAAT
CTCACAGAGATGACCTCCAACCTCGACTTACTCCAGAAGCTTTTACTGAAGAAAGCCGTCTATGTAGACGACGAGACGTTTGCCAGAGCTTCTTTGTGCTCCGAACAAGC
AAGGACGATCAAGGTTCTTGAACAAAGGGTTGAGACTTTGGAAAGGGAACTTGATGCTGCTATCACCGCTGCGGCTCATGCTCGTTCAGAAAAACGTCAAGCAGAGGCAG
CACAAAGAGCTGCTGAAGTACATGTACAGGAGGTCACTAAAGAGCTCGAGAACACTACAAAGGTATTTCAACTGCATATGGATGAATTACGCGCGAAGCAAGAAGAAATC
AACAAACGTGATAAGGATATTAAGCTCTTGGAAGCAATAATTCAAACTCTTGGTGGGAGAGAATAAAGTCTGCAAATATGTGAGGTTTAGATTTTGATTATTAGGATGTT
AGTATTTTTCTTTGTTTTGTGGGTGAAGTTTTAGTGTAAAATATTTATGGATAGTCTGGTTGAATCTGATTAGGAATTTGGTGTGTAATATATTGTTTTGAACTTAGTGA
ATTAACATTTTTTAGAAAATGGATAAATCAAATTCAAATTACATTTCATTGGATGACAATGTACAAGTTATTTGCTCCCAGTGCCAACTACTATGAGAATAAAAGAAAAT
GAGGA

Protein sequence

Show/hide protein sequence

MEDKGKGTDRWSGAVANLTEMTSNLDLLQKLLLKKAVYVDDETFARASLCSEQARTIKVLEQRVETLERELDAAITAAAHARSEKRQAEAAQRAAEVHVQEVTKELENTT
KVFQLHMDELRAKQEEINKRDKDIKLLEAIIQTLGGRE

IVF0024699 (gene) of Melon (IVF77) v1 genome