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IVF0024715 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024715
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCCR4-NOT transcription complex subunit like
Genome locationchr01:30638165..30640339
RNA-Seq ExpressionIVF0024715
SyntenyIVF0024715
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058667.1 uncharacterized protein E6C27_scaffold339G001370 [Cucumis melo var. makuwa]9.49e-49100Show/hide
Query:  MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQG
        MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQG
Subjt:  MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQG

KAG6575660.1 hypothetical protein SDJN03_26299, partial [Cucurbita argyrosperma subsp. sororia]4.49e-4675.78Show/hide
Query:  MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF
        MASIF APPS+LNLTSR SL H AVLPSSIA IQ+ SNA P  SF  R N  GLELRQRS  I AS S+D NSIKEEN SSKASSD AQGPPFLTILAG 
Subjt:  MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF

Query:  FVFSLILWIFSSAVTSLLGLVVKLISAK
        FVFSL+LW+ SSA TSL+GLVVKLIS K
Subjt:  FVFSLILWIFSSAVTSLLGLVVKLISAK

XP_011659472.1 uncharacterized protein LOC101220885 [Cucumis sativus]4.08e-6591.27Show/hide
Query:  MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGFFV
        MAS+F APPSQLNLTSRRS  HRA LPS IASIQF SNASPF SF  RKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGFFV
Subjt:  MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGFFV

Query:  FSLILWIFSSAVTSLLGLVVKLISAK
         SLILWIFSSAVTSLLGLVVKLISAK
Subjt:  FSLILWIFSSAVTSLLGLVVKLISAK

XP_022953425.1 uncharacterized protein LOC111455984 [Cucurbita moschata]5.49e-4776.56Show/hide
Query:  MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF
        MASIF APPS+LNLTSR SL H AVLPSSIA IQ+ SNA P  SF  R N  GLELRQRS  I AS S+DGNSIKEEN SSKASSD AQGPPFLTILAG 
Subjt:  MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF

Query:  FVFSLILWIFSSAVTSLLGLVVKLISAK
        FVFSL+LW+ SSA TSL+GLVVKLIS K
Subjt:  FVFSLILWIFSSAVTSLLGLVVKLISAK

XP_038899532.1 uncharacterized protein LOC120086813 isoform X1 [Benincasa hispida]5.49e-4776.56Show/hide
Query:  MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF
        MASIF AP  +LNLTSR SL HRA LPSSI +IQF SNASPF SF  R N  GLELRQRS  I AS S+DGNSIKEEN SSKAS+D AQGPPFLTILAG 
Subjt:  MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQRS--IAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF

Query:  FVFSLILWIFSSAVTSLLGLVVKLISAK
        FVFSL+LWIFSS VTS L LVVKLIS K
Subjt:  FVFSLILWIFSSAVTSLLGLVVKLISAK

TrEMBL top hitse value%identityAlignment
A0A0A0K9W1 Uncharacterized protein7.4e-4991.27Show/hide
Query:  MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGFFV
        MAS+F APPSQLNLTSRRS  HRA LPS IASIQF SNASPF SF  RKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGFFV
Subjt:  MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGFFV

Query:  FSLILWIFSSAVTSLLGLVVKLISAK
         SLILWIFSSAVTSLLGLVVKLISAK
Subjt:  FSLILWIFSSAVTSLLGLVVKLISAK

A0A5A7UVF6 Uncharacterized protein4.2e-36100Show/hide
Query:  MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQG
        MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQG
Subjt:  MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQG

A0A6J1GPL5 uncharacterized protein LOC1114559844.7e-3576.56Show/hide
Query:  MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQR--SIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF
        MASIF APPS+LNLTSR SL H AVLPSSIA IQ+ SNA P  SF  R N  GLELRQR  SI AS S+DGNSIKEEN SSKASS DAQGPPFLTILAG 
Subjt:  MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQR--SIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF

Query:  FVFSLILWIFSSAVTSLLGLVVKLISAK
        FVFSL+LW+ SSA TSL+GLVVKLIS K
Subjt:  FVFSLILWIFSSAVTSLLGLVVKLISAK

A0A6J1JUC2 uncharacterized protein LOC1114884367.5e-3374.6Show/hide
Query:  MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQR--SIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF
        MASIF APPS+LNLTSR SL H AVLPSSIA IQ+ SNA P  SF  R N  GLEL  R  SI AS S+DGNSI+EEN SSKASS DAQGPPFLTILAG 
Subjt:  MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQR--SIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGF

Query:  FVFSLILWIFSSAVTSLLGLVVKLIS
        FVFSL+LW+ SSA TSL+GLVVKLIS
Subjt:  FVFSLILWIFSSAVTSLLGLVVKLIS

A0A6J1KVQ7 uncharacterized protein LOC1114980258.0e-2765.12Show/hide
Query:  MASIFVAPPSQLNLTSRR-SLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQR--SIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAG
        MAS+F APPSQL L+S R SL H+A LP SI  ++F  N  P  SF   KN  GL+LRQR  SI AS S+DGNS KEEN  SK +  DAQGPPFLTILAG
Subjt:  MASIFVAPPSQLNLTSRR-SLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQR--SIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAG

Query:  FFVFSLILWIFSSAVTSLLGLVVKLISAK
        FFVFSL+LWI SS+VT+L+ LVVKLIS K
Subjt:  FFVFSLILWIFSSAVTSLLGLVVKLISAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATCTTCGTTGCGCCGCCGTCTCAACTGAATCTTACATCCCGCCGGAGTTTGACTCACAGAGCCGTTCTTCCTTCTTCCATCGCCAGCATTCAATTTCAGTC
GAACGCCTCTCCATTTCTTTCTTTCAGCAACAGGAAGAACATCATTGGATTGGAATTAAGGCAAAGATCTATAGCAGCCTCAAAATCCACAGATGGGAATTCCATCAAGG
AGGAAAATAGTTCGAGTAAAGCAAGTAGTGATGATGCCCAAGGTCCTCCATTTCTTACCATTTTGGCTGGATTTTTTGTCTTTTCCCTTATACTATGGATATTCAGTTCT
GCTGTTACCTCACTTTTAGGTCTAGTCGTCAAGCTGATCTCAGCAAAATAG
mRNA sequenceShow/hide mRNA sequence
AAAAAAAGAAAACATTGTTAAAAGATAAGAAAATGACACGTGGATTACGAATGGAAGAAGCACCAACCACTCCCTCTTGCTCTCCGGAAGCTCCGAAGTCTTTGTATTAC
GACTAATTCACCGACGGTGAAGAATGGCTTCCATCTTCGTTGCGCCGCCGTCTCAACTGAATCTTACATCCCGCCGGAGTTTGACTCACAGAGCCGTTCTTCCTTCTTCC
ATCGCCAGCATTCAATTTCAGTCGAACGCCTCTCCATTTCTTTCTTTCAGCAACAGGAAGAACATCATTGGATTGGAATTAAGGCAAAGATCTATAGCAGCCTCAAAATC
CACAGATGGGAATTCCATCAAGGAGGAAAATAGTTCGAGTAAAGCAAGTAGTGATGATGCCCAAGGTCCTCCATTTCTTACCATTTTGGCTGGATTTTTTGTCTTTTCCC
TTATACTATGGATATTCAGTTCTGCTGTTACCTCACTTTTAGGTCTAGTCGTCAAGCTGATCTCAGCAAAATAGTGTCGCATAATTGGAAATGGAATAATTTCATGTTTC
TAGGCTTAAATCTGTATGGTTATATTTGTAGCAAAACTTACCTGTTAGCCAGTTTTAGCTTTATTTCTAGTTAATAGATTTTATTTTCATCTTATTTATGCCCTACCTTC
AGTCTTCAGCTGTGTTTAATGAACTTAAATAATTGTGTAGATTAACCCATCTATTAAAAT
Protein sequenceShow/hide protein sequence
MASIFVAPPSQLNLTSRRSLTHRAVLPSSIASIQFQSNASPFLSFSNRKNIIGLELRQRSIAASKSTDGNSIKEENSSSKASSDDAQGPPFLTILAGFFVFSLILWIFSS
AVTSLLGLVVKLISAK