CuGenDBv2

Gene ID	IVF0024717
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	NBS-LRR type resistance protein
Genome location	chr12:6080805..6086568
RNA-Seq Expression	IVF0024717
Synteny	IVF0024717
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0035804.1 mucin-3A-like isoform X2 [Cucumis melo var. makuwa]

2.00e-55

84.96

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Query:  LDESSGSVERTYQSSAPEGCTYQSSAP----------EGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGC
        L  SSGSVERTYQSSAPEGCTYQSSAP          EGCT+QSSAPEGCTHQSSAPEGCTHQSSAPEGCT+QSSAPEGCTHQSSAPEGCTYQSSAP GC
Subjt:  LDESSGSVERTYQSSAPEGCTYQSSAP----------EGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGC

Query:  THQSSAPEGCIYQ
        THQSSAPEGC +Q
Subjt:  THQSSAPEGCIYQ

KAA0038171.1 flocculation protein FLO1-like [Cucumis melo var. makuwa]

6.89e-56

92.23

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Query:  LDESSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGC
        L  SSGSVERTYQSSAPEGCTYQSSAPEGCT+QSSAPEGCT+QSSAPEGCT+QSSAPEGCTYQSSAPEGCT+QSSAPEGCTYQSSAPEGCT+QSSAPEGC
Subjt:  LDESSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGC

Query:  IYQ
         YQ
Subjt:  IYQ

KAA0067921.1 Adhesive plaque matrix protein [Cucumis melo var. makuwa]

1.62e-57

88.99

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Query:  PYSQAELDESSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQS
        PY ++   E  GSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCT+QSSAPEGCTHQSSAPEGCT+QSSAPEGCTHQS
Subjt:  PYSQAELDESSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQS

Query:  SAPEGCIYQ
        SAPEGC +Q
Subjt:  SAPEGCIYQ

TYK11923.1 mucin-3A-like isoform X2 [Cucumis melo var. makuwa]

2.20e-57

92.23

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Query:  LDESSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGC
        L  SSGSVERTYQSSAPEGCTYQSSAPEGCT+QSSAPEGCT+QSSAPEGCT+QSSAPEGCTYQSSAPEGCT+QSSAPEGCTYQSSAPEGCT+QSSAPEGC
Subjt:  LDESSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGC

Query:  IYQ
         YQ
Subjt:  IYQ

TYK28771.1 mucin-3A-like isoform X2 [Cucumis melo var. makuwa]

1.05e-55

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Query:  SSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCIYQ
        SSGSVERTYQSSAPEGCTYQSSAPEGCT+QSSAPEGCT+QSSAPEGCT+QSSAPEGCTYQSSAPEGCT+QSSAPEGCTYQSSAPEGCT+QSSAPEGC YQ
Subjt:  SSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCIYQ

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T959 Flocculation protein FLO1-like

4.0e-44

92.23

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Query:  LDESSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGC
        L  SSGSVERTYQSSAPEGCTYQSSAPEGCT+QSSAPEGCT+QSSAPEGCT+QSSAPEGCTYQSSAPEGCT+QSSAPEGCTYQSSAPEGCT+QSSAPEGC
Subjt:  LDESSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGC

Query:  IYQ
         YQ
Subjt:  IYQ

A0A5A7VKG1 Flocculation protein FLO1-like

3.0e-44

88.89

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Query:  YSQAELDESSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSS
        YS   +  SSGSVERTYQSSAPEGCTYQSSAPEGCT+QSSAPEGCT+QSSAPEGCT+QSSAPEGCTYQSSAPEGCT+QSSAPEGCTYQSSAPEGCT+QSS
Subjt:  YSQAELDESSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSS

Query:  APEGCIYQ
        APEGC YQ
Subjt:  APEGCIYQ

A0A5A7VQN4 Adhesive plaque matrix protein

9.4e-46

88.99

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Query:  PYSQAELDESSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQS
        PY ++   E  GSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCT+QSSAPEGCTHQSSAPEGCT+QSSAPEGCTHQS
Subjt:  PYSQAELDESSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQS

Query:  SAPEGCIYQ
        SAPEGC +Q
Subjt:  SAPEGCIYQ

A0A5D3CJ15 Mucin-3A-like isoform X2

4.0e-44

92.23

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Query:  LDESSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGC
        L  SSGSVERTYQSSAPEGCTYQSSAPEGCT+QSSAPEGCT+QSSAPEGCT+QSSAPEGCTYQSSAPEGCT+QSSAPEGCTYQSSAPEGCT+QSSAPEGC
Subjt:  LDESSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGC

Query:  IYQ
         YQ
Subjt:  IYQ

A0A5D3DYW6 Mucin-3A-like isoform X2

1.2e-43

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Query:  SSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCIYQ
        SSGSVERTYQSSAPEGCTYQSSAPEGCT+QSSAPEGCT+QSSAPEGCT+QSSAPEGCTYQSSAPEGCT+QSSAPEGCTYQSSAPEGCT+QSSAPEGC YQ
Subjt:  SSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCIYQ

SwissProt top hits

e value

%identity

Alignment

Q59TP1 Cell wall protein RTB1

3.0e-04

46.32

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Query:  SSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPE
        +S S   + +SS PE  T  +S+    T +SSAPE  T  +S+    T +SSAPE  T +SSAPE    +SSAPE  T +SSAPE    +SSAPE
Subjt:  SSGSVERTYQSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPE

Q8LBZ4 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 4

5.9e-05

54.76

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Query:  QAIAYGACLRSGEEAPDDDRQRELDDELRAKVVDELLKRRKE
        +++A+G CLRSG+ AP +  QREL DELR +V DE ++RR+E
Subjt:  QAIAYGACLRSGEEAPDDDRQRELDDELRAKVVDELLKRRKE

Arabidopsis top hits

e value

%identity

Alignment

AT3G57810.1 Cysteine proteinases superfamily protein

4.2e-06

54.76

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Query:  QAIAYGACLRSGEEAPDDDRQRELDDELRAKVVDELLKRRKE
        +++A+G CLRSG+ AP +  QREL DELR +V DE ++RR+E
Subjt:  QAIAYGACLRSGEEAPDDDRQRELDDELRAKVVDELLKRRKE

AT3G57810.2 Cysteine proteinases superfamily protein

4.2e-06

54.76

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Query:  QAIAYGACLRSGEEAPDDDRQRELDDELRAKVVDELLKRRKE
        +++A+G CLRSG+ AP +  QREL DELR +V DE ++RR+E
Subjt:  QAIAYGACLRSGEEAPDDDRQRELDDELRAKVVDELLKRRKE

AT3G57810.3 Cysteine proteinases superfamily protein

4.2e-06

54.76

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Query:  QAIAYGACLRSGEEAPDDDRQRELDDELRAKVVDELLKRRKE
        +++A+G CLRSG+ AP +  QREL DELR +V DE ++RR+E
Subjt:  QAIAYGACLRSGEEAPDDDRQRELDDELRAKVVDELLKRRKE

Sequences

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CDS sequence

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ATGAGCGCAAAGGAGAGAGATCTTGGAATGTCGCCTAGGACACTCGCCCGGCTCACTGGCTCCACCGTCCCAATTCGGCTTGGCTGCTATTTAGCATCTATTCTTGTATT
GCACCGCTTGATTGAGTGGATGCAAGCAATCGCTTATGGAGCTTGTTTGAGAAGTGGGGAAGAAGCTCCTGATGATGATCGTCAAAGAGAGCTCGATGATGAATTAAGGG
CTAAGGTCGTGGATGAGCTCTTAAAGAGGCGGAAGGAAATGATTGATACACGAAAACCATACTCACAAGCCGAGTTAGATGAGTCTAGTGGTTCCGTAGAACGCACATAT
CAGTCTAGTGCTCCCGAAGGATGCACATATCAGTCTAGTGCTCCCGAAGGATGCACACATCAGTCTAGTGCTCCCGAAGGATGCACTCATCAGTCTAGTGCTCCCGAAGG
ATGCACACATCAGTCTAGTGCTCCCGAAGGATGCACCTATCAGTCTAGTGCTCCCGAAGGATGCACACATCAGTCTAGTGCTCCCGAAGGATGCACCTATCAGTCTAGTG
CTCCCGAAGGATGCACACATCAGTCTAGTGCTCCCGAAGGATGCATCTATCAGTAA

mRNA sequence

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Protein sequence

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MSAKERDLGMSPRTLARLTGSTVPIRLGCYLASILVLHRLIEWMQAIAYGACLRSGEEAPDDDRQRELDDELRAKVVDELLKRRKEMIDTRKPYSQAELDESSGSVERTY
QSSAPEGCTYQSSAPEGCTHQSSAPEGCTHQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCTYQSSAPEGCTHQSSAPEGCIYQ

IVF0024717 (gene) of Melon (IVF77) v1 genome