; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0024720 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024720
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S ribosomal protein L35
Genome locationchr09:6437986..6439603
RNA-Seq ExpressionIVF0024720
SyntenyIVF0024720
Gene Ontology termsGO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001854 - Ribosomal protein L29/L35
IPR036049 - Ribosomal protein L29/L35 superfamily
IPR045059 - 60S ribosomal protein L35


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149815.1 60S ribosomal protein L35 [Cucumis sativus]4.33e-7099.19Show/hide
Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKELYFPLRKYAIKV
        SLKTERQKKKE+YFPLRKYAIKV
Subjt:  SLKTERQKKKELYFPLRKYAIKV

XP_008463526.1 PREDICTED: 60S ribosomal protein L35 [Cucumis melo]2.15e-70100Show/hide
Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKELYFPLRKYAIKV
        SLKTERQKKKELYFPLRKYAIKV
Subjt:  SLKTERQKKKELYFPLRKYAIKV

XP_022134532.1 60S ribosomal protein L35 [Momordica charantia]7.18e-6997.56Show/hide
Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLL QLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKELYFPLRKYAIKV
        SLKTERQKKKE+YFPLRKYAIKV
Subjt:  SLKTERQKKKELYFPLRKYAIKV

XP_022939961.1 60S ribosomal protein L35 [Cucurbita moschata]2.06e-6896.75Show/hide
Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKELYFPLRKYAIKV
        SLKTER+KKKE+Y+PLRKYAIKV
Subjt:  SLKTERQKKKELYFPLRKYAIKV

XP_038889679.1 60S ribosomal protein L35 [Benincasa hispida]1.02e-6897.56Show/hide
Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSK+DLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKELYFPLRKYAIKV
        SLKTERQKKKE+YFPLRKYAIKV
Subjt:  SLKTERQKKKELYFPLRKYAIKV

TrEMBL top hitse value%identityAlignment
A0A0A0KQT2 Uncharacterized protein6.4e-5399.19Show/hide
Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKELYFPLRKYAIKV
        SLKTERQKKKE+YFPLRKYAIKV
Subjt:  SLKTERQKKKELYFPLRKYAIKV

A0A1S3CJH2 60S ribosomal protein L353.7e-53100Show/hide
Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKELYFPLRKYAIKV
        SLKTERQKKKELYFPLRKYAIKV
Subjt:  SLKTERQKKKELYFPLRKYAIKV

A0A5D3C1Q9 60S ribosomal protein L353.2e-5299.18Show/hide
Query:  ARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
        +RIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS
Subjt:  ARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQAS

Query:  LKTERQKKKELYFPLRKYAIKV
        LKTERQKKKELYFPLRKYAIKV
Subjt:  LKTERQKKKELYFPLRKYAIKV

A0A6J1BZV3 60S ribosomal protein L355.4e-5297.56Show/hide
Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLL QLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKELYFPLRKYAIKV
        SLKTERQKKKE+YFPLRKYAIKV
Subjt:  SLKTERQKKKELYFPLRKYAIKV

A0A6J1JVN4 60S ribosomal protein L351.2e-5196.75Show/hide
Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKELYFPLRKYAIKV
        SLKTER+KKKE+Y+PLRKYAIKV
Subjt:  SLKTERQKKKELYFPLRKYAIKV

SwissProt top hitse value%identityAlignment
O80626 60S ribosomal protein L35-24.9e-5090.24Show/hide
Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSKADL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKELYFPLRKYAIKV
        SLKTER+KKKE+YFP+RKYAIKV
Subjt:  SLKTERQKKKELYFPLRKYAIKV

Q9LZ41 60S ribosomal protein L35-42.4e-4989.43Show/hide
Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKELYFPLRKYAIKV
        SLKTER+KKKE+YFP+RKYAIKV
Subjt:  SLKTERQKKKELYFPLRKYAIKV

Q9M3D2 60S ribosomal protein L35-31.6e-4887.8Show/hide
Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK+DL  QLK+LKAEL+ LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKELYFPLRKYAIKV
        SLKTER+KKK++YFP+RKYAIKV
Subjt:  SLKTERQKKKELYFPLRKYAIKV

Q9M5L0 60S ribosomal protein L359.8e-5191.06Show/hide
Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQK+KA+LL QLKDLKAEL+LLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQK ALREAYK KK LPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKELYFPLRKYAIKV
        SLKTER+KKKE+YFP+RKYAIKV
Subjt:  SLKTERQKKKELYFPLRKYAIKV

Q9SF53 60S ribosomal protein L35-11.4e-4989.43Show/hide
Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSK+DL  QLK+LKAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKELYFPLRKYAIKV
        SLKTER+KKKE+YFP+RKYAIKV
Subjt:  SLKTERQKKKELYFPLRKYAIKV

Arabidopsis top hitse value%identityAlignment
AT2G39390.1 Ribosomal L29 family protein3.4e-5190.24Show/hide
Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSKADL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKELYFPLRKYAIKV
        SLKTER+KKKE+YFP+RKYAIKV
Subjt:  SLKTERQKKKELYFPLRKYAIKV

AT3G09500.1 Ribosomal L29 family protein1.0e-5089.43Show/hide
Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSK+DL  QLK+LKAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKELYFPLRKYAIKV
        SLKTER+KKKE+YFP+RKYAIKV
Subjt:  SLKTERQKKKELYFPLRKYAIKV

AT3G55170.1 Ribosomal L29 family protein1.1e-4987.8Show/hide
Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK+DL  QLK+LKAEL+ LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKELYFPLRKYAIKV
        SLKTER+KKK++YFP+RKYAIKV
Subjt:  SLKTERQKKKELYFPLRKYAIKV

AT3G55170.2 Ribosomal L29 family protein1.1e-4987.8Show/hide
Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK+DL  QLK+LKAEL+ LRVAKVTGGAPNKLSKIKVVR SIAQVLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKELYFPLRKYAIKV
        SLKTER+KKK++YFP+RKYAIKV
Subjt:  SLKTERQKKKELYFPLRKYAIKV

AT5G02610.1 Ribosomal L29 family protein1.7e-5089.43Show/hide
Query:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVVR SIAQVLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLKTERQKKKELYFPLRKYAIKV
        SLKTER+KKKE+YFP+RKYAIKV
Subjt:  SLKTERQKKKELYFPLRKYAIKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGGATCAAGGTTCATGAGTTGAGGCAGAAATCGAAGGCGGATCTGTTGTTGCAGCTTAAGGATCTTAAGGCGGAGCTTTCTCTCCTTCGTGTCGCCAAAGTTAC
CGGCGGTGCTCCGAACAAGCTATCCAAAATCAAGGTGGTGAGATTGTCGATTGCTCAAGTATTGACAGTAATATCTCAGAAGCAGAAGGCGGCGTTGAGGGAAGCTTACA
AGAAGAAGAAGCTTCTGCCTCTTGATCTGCGCCCAAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAGCACCAGGCGTCTTTGAAAACTGAGAGACAGAAGAAGAAA
GAATTGTACTTTCCGTTGAGGAAATATGCTATTAAGGTGTAG
mRNA sequenceShow/hide mRNA sequence
CTAGTTTTCTCAGTAGCACCTCTTCCACCACCTTCCATCTCTTCTAGGGTTTCGCCGACTCCAAGACCGCACGATTAGAAATGGCGAGGATCAAGGTTCATGAGTTGAGG
CAGAAATCGAAGGCGGATCTGTTGTTGCAGCTTAAGGATCTTAAGGCGGAGCTTTCTCTCCTTCGTGTCGCCAAAGTTACCGGCGGTGCTCCGAACAAGCTATCCAAAAT
CAAGGTGGTGAGATTGTCGATTGCTCAAGTATTGACAGTAATATCTCAGAAGCAGAAGGCGGCGTTGAGGGAAGCTTACAAGAAGAAGAAGCTTCTGCCTCTTGATCTGC
GCCCAAAGAAGACCAGGGCCATTCGTAGAAGGCTCACCAAGCACCAGGCGTCTTTGAAAACTGAGAGACAGAAGAAGAAAGAATTGTACTTTCCGTTGAGGAAATATGCT
ATTAAGGTGTAGTGGTAAGTATTATATTGGGTAGTCCATTTTTATATGCAACGGCAAACCAATTTTGTTGGCAAGTTTTGTCTCGTAATCTTATGTCGGATACTCTTGAG
GTATTTCTCCCCAAACCAAGGTGTTTCATTTTCATTGACAATTATATATTTTTGACAGTTGATAGCCTTTTTTCTTGTTTATTGACTTGATCTTTTTCTGTCCAAAAAAC
ACTTGTTCTTTTTGTACATTTTGTTTGCTAG
Protein sequenceShow/hide protein sequence
MARIKVHELRQKSKADLLLQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKK
ELYFPLRKYAIKV