CuGenDBv2

Gene ID	IVF0024759
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	transcription factor IBH1
Genome location	chr03:15707082..15707538
RNA-Seq Expression	IVF0024759
Synteny	IVF0024759
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR036638 - Helix-loop-helix DNA-binding domain superfamily IPR044549 - Transcription factor IBH1-like, bHLH domain IPR044660 - Transcription factor IBH1-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8646599.1 hypothetical protein Csa_005327 [Cucumis sativus]

1.11e-39

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Query:  DQLKRQSQRIKCLARALLFKLQTRPRHRTLMRRKRRPSTSPDDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDQHLS
          + R + R +  ARALLF+L TRPRH+TLMRRKRRPSTS DD VGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAIS+ HLS
Subjt:  DQLKRQSQRIKCLARALLFKLQTRPRHRTLMRRKRRPSTSPDDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDQHLS

KAG6575326.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. sororia]

9.38e-29

59.81

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Query:  PDQLKRQSQRIKCLA---------------RALLFKLQTRPRHRTLMRRKRRPSTSPDDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAI
        P +L+R+S+RIK +A               RALLFKL+TR RHRTL+ R+R    S DD+VGKLRRL+PGGE+MDVCTLLEET  YI CLS QVKVMKAI
Subjt:  PDQLKRQSQRIKCLA---------------RALLFKLQTRPRHRTLMRRKRRPSTSPDDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAI

Query:  SDQHLST
         D   ST
Subjt:  SDQHLST

KAG7025295.1 Transcription factor IBH1, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.96e-31

60.83

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Query:  SSRSATFASAPPDQLKRQSQRIKCLA---------------RALLFKLQTRPRHRTLMRRKRR--PSTSPDDQVGKLRRLLPGGETMDVCTLLEETANYI
        S R  T AS    +L+R+S+RIK  A               RALLFKL TR RH TLMRR+R   PS  PDD VGKLRRLLPGG+ MDVCTLLEETA+YI
Subjt:  SSRSATFASAPPDQLKRQSQRIKCLA---------------RALLFKLQTRPRHRTLMRRKRR--PSTSPDDQVGKLRRLLPGGETMDVCTLLEETANYI

Query:  HCLSTQVKVMKAISDQHLST
        HCLS QVKVM AI+  HLST
Subjt:  HCLSTQVKVMKAISDQHLST

XP_008464343.1 PREDICTED: transcription factor IBH1 [Cucumis melo]

5.05e-65

76.97

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Query:  MPNSKSAITLLNSTSSR------------------SATFASAPPDQLKRQSQRIKCLA---------------RALLFKLQTRPRHRTLMRRKRRPSTSP
        MPNSKSAITLLNSTSSR                  SATFASAPPDQLKRQSQRIK +A               RALLFKLQTRPRHRTLMRRKRRPSTSP
Subjt:  MPNSKSAITLLNSTSSR------------------SATFASAPPDQLKRQSQRIKCLA---------------RALLFKLQTRPRHRTLMRRKRRPSTSP

Query:  DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDQHLSTPN
        DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDQHLSTPN
Subjt:  DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDQHLSTPN

XP_023005092.1 transcription factor IBH1 [Cucurbita maxima]

3.69e-29

58.82

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Query:  SSRSATFASAPPDQLKRQSQRIKCLA---------------RALLFKLQTRPRHRTLMRRK--RRPSTSPDDQVGKLRRLLPGGETMDVCTLLEETANYI
        S R  T AS    +L+R+S+RIK  A               RALLFKL TR RHRT MRR+    PS  PDD VGKLRRL+PGG+ MDVCTLLEETA+YI
Subjt:  SSRSATFASAPPDQLKRQSQRIKCLA---------------RALLFKLQTRPRHRTLMRRK--RRPSTSPDDQVGKLRRLLPGGETMDVCTLLEETANYI

Query:  HCLSTQVKVMKAISDQHLS
        HCLS QVKVM AI+  HLS
Subjt:  HCLSTQVKVMKAISDQHLS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KDQ3 Uncharacterized protein

4.4e-43

75.71

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Query:  MPNSKSAITLLNSTSSR------SATFASAPPDQLKRQSQRIK---------------CLARALLFKLQTRPRHRTLMRRKRRPSTSPDDQVGKLRRLLP
        M NSKSAITLLNSTSSR      SATFASAPPDQLKRQS+RIK                 ARALLF+L TRPRH+TLMRRKRRPSTS DD VGKLRRLLP
Subjt:  MPNSKSAITLLNSTSSR------SATFASAPPDQLKRQSQRIK---------------CLARALLFKLQTRPRHRTLMRRKRRPSTSPDDQVGKLRRLLP

Query:  GGETMDVCTLLEETANYIHCLSTQVKVMKAISDQHLSTPN
        GGETMDVCTLLEETANYIHCLSTQVKVMKAIS+ HLS  N
Subjt:  GGETMDVCTLLEETANYIHCLSTQVKVMKAISDQHLSTPN

A0A1S3CLD3 transcription factor IBH1

5.4e-49

76.97

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Query:  MPNSKSAITLLNSTSS------------------RSATFASAPPDQLKRQSQRIKCL---------------ARALLFKLQTRPRHRTLMRRKRRPSTSP
        MPNSKSAITLLNSTSS                  RSATFASAPPDQLKRQSQRIK +               ARALLFKLQTRPRHRTLMRRKRRPSTSP
Subjt:  MPNSKSAITLLNSTSS------------------RSATFASAPPDQLKRQSQRIKCL---------------ARALLFKLQTRPRHRTLMRRKRRPSTSP

Query:  DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDQHLSTPN
        DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDQHLSTPN
Subjt:  DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDQHLSTPN

A0A5D3BPL2 Transcription factor IBH1

5.4e-49

76.97

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Query:  MPNSKSAITLLNSTSS------------------RSATFASAPPDQLKRQSQRIKCL---------------ARALLFKLQTRPRHRTLMRRKRRPSTSP
        MPNSKSAITLLNSTSS                  RSATFASAPPDQLKRQSQRIK +               ARALLFKLQTRPRHRTLMRRKRRPSTSP
Subjt:  MPNSKSAITLLNSTSS------------------RSATFASAPPDQLKRQSQRIKCL---------------ARALLFKLQTRPRHRTLMRRKRRPSTSP

Query:  DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDQHLSTPN
        DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDQHLSTPN
Subjt:  DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISDQHLSTPN

A0A6J1KS83 transcription factor IBH1

1.6e-21

58.82

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Query:  SSRSATFASAPPDQLKRQSQRIKCL---------------ARALLFKLQTRPRHRTLMRRK--RRPSTSPDDQVGKLRRLLPGGETMDVCTLLEETANYI
        S R  T AS    +L+R+S+RIK                 ARALLFKL TR RHRT MRR+    PS  PDD VGKLRRL+PGG+ MDVCTLLEETA+YI
Subjt:  SSRSATFASAPPDQLKRQSQRIKCL---------------ARALLFKLQTRPRHRTLMRRK--RRPSTSPDDQVGKLRRLLPGGETMDVCTLLEETANYI

Query:  HCLSTQVKVMKAISDQHLS
        HCLS QVKVM AI+  HLS
Subjt:  HCLSTQVKVMKAISDQHLS

A0A7N2RCD6 Uncharacterized protein

1.6e-13

44.44

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Query:  ASAPPDQLKRQSQRIKCLA---------------RALLFKLQTRPRHRTLMRRK-------RRPSTSPDDQVGKLRRLLPGGETMDVCTLLEETANYIHC
        +S+  ++++++SQRIK  A               RA+LFKL+ R RH  +MRR+       +        Q  KLR+L+PGG+ MD+C+LLEETA+YI C
Subjt:  ASAPPDQLKRQSQRIKCLA---------------RALLFKLQTRPRHRTLMRRK-------RRPSTSPDDQVGKLRRLLPGGETMDVCTLLEETANYIHC

Query:  LSTQVKVMKAISDQHLS
        LSTQVKVM+ I+D HLS
Subjt:  LSTQVKVMKAISDQHLS

SwissProt top hits

e value

%identity

Alignment

Q9SKX1 Transcription factor IBH1

1.6e-05

40.91

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Query:  TRPRHRTLMRRKRRPSTSP--DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISD
        +R + +   +R+R    +P  ++   +LR L+PGG  M+   L+EETA+YI CLS QVKVM+ + D
Subjt:  TRPRHRTLMRRKRRPSTSP--DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISD

Arabidopsis top hits

e value

%identity

Alignment

AT2G43060.1 ILI1 binding bHLH 1

1.1e-06

40.91

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Query:  TRPRHRTLMRRKRRPSTSP--DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISD
        +R + +   +R+R    +P  ++   +LR L+PGG  M+   L+EETA+YI CLS QVKVM+ + D
Subjt:  TRPRHRTLMRRKRRPSTSP--DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAISD

AT3G21330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

8.9e-04

38.1

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Query:  KLQTRPRHRTLMRRKRRPSTSPDDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMK
        K+ T P  +T+  R+RR   S  +++  L+ L+PGG  MD  ++L+E ANY+  L  QVK ++
Subjt:  KLQTRPRHRTLMRRKRRPSTSPDDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMK

AT4G30180.1 sequence-specific DNA binding transcription factors;transcription regulators

1.4e-04

44.19

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Query:  DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAI
        ++++ +L++LLPGGE M+V  +L E  NYI CL  Q   +K+I
Subjt:  DDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAI

Sequences

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CDS sequence

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ATGCCTAATTCTAAATCAGCTATAACCCTATTGAATTCTACTTCATCTCGATCCGCCACCTTTGCCTCCGCTCCTCCAGATCAACTCAAACGCCAGAGTCAACGGATAAA
ATGCTTGGCTAGAGCCCTTCTCTTCAAGCTCCAGACGCGACCCAGACACAGGACTCTAATGAGAAGAAAAAGGAGACCCTCGACTAGCCCTGATGACCAGGTCGGTAAGC
TCCGACGCCTGCTTCCCGGTGGTGAGACCATGGACGTGTGCACGTTATTGGAGGAAACTGCAAATTACATCCATTGCTTGTCCACGCAGGTTAAGGTGATGAAAGCCATA
TCTGATCAGCACTTGTCAACGCCCAATTAA

mRNA sequence

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Protein sequence

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MPNSKSAITLLNSTSSRSATFASAPPDQLKRQSQRIKCLARALLFKLQTRPRHRTLMRRKRRPSTSPDDQVGKLRRLLPGGETMDVCTLLEETANYIHCLSTQVKVMKAI
SDQHLSTPN

IVF0024759 (gene) of Melon (IVF77) v1 genome