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IVF0024767 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024767
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPhotosynthetic NDH subunit of subcomplex B 3
Genome locationchr10:23785046..23785359
RNA-Seq ExpressionIVF0024767
SyntenyIVF0024767
Gene Ontology termsGO:1901800 - positive regulation of proteasomal protein catabolic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008233 - peptidase activity (molecular function)
GO:0036402 - proteasome-activating ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043127.1 putative tetraacyldisaccharide 4'-kinase [Cucumis melo var. makuwa]2.94e-0496Show/hide
Query:  AYLDELSNVNKFQVSKGFLLLRVNE
        AYLDELSN NKFQVSKGFLLLRVNE
Subjt:  AYLDELSNVNKFQVSKGFLLLRVNE
TYK02519.1 26S protease regulatory subunit 8-like protein B-like [Cucumis melo var. makuwa]1.29e-1188.37Show/hide
Query:  SYFATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVV
        S+ ATL DSFLAYLDELSN  KFQVSKGFLLLRVNEVITMLVV
Subjt:  SYFATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVV
TYK27600.1 photosynthetic NDH subunit of subcomplex B 3 [Cucumis melo var. makuwa]1.20e-14100Show/hide
Query:  ATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVVM
        ATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVVM
Subjt:  ATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVVM
TrEMBL top hitse value%identityAlignment
A0A5D3BWM3 26S protease regulatory subunit 8-like protein B-like3.1e-0972.73Show/hide
Query:  MIQYCKTK---SYFATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVVM
        ++ Y K +   S+ ATL DSFLAYLDELSN  KFQVSKGFLLLRVNEVITMLVV+
Subjt:  MIQYCKTK---SYFATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVVM
A0A5D3DWD6 Photosynthetic NDH subunit of subcomplex B 34.3e-11100Show/hide
Query:  ATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVVM
        ATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVVM
Subjt:  ATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVVM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATACAATATTGTAAAACAAAAAGTTATTTTGCTACTTTGGCTGATTCCTTTCTAGCATATCTTGATGAACTCTCTAATGTAAACAAGTTTCAGGTTTCTAAAGGCTT
TTTACTTCTCCGTGTAAATGAAGTAATAACTATGTTGGTTGTTATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATACAATATTGTAAAACAAAAAGTTATTTTGCTACTTTGGCTGATTCCTTTCTAGCATATCTTGATGAACTCTCTAATGTAAACAAGTTTCAGGTTTCTAAAGGCTT
TTTACTTCTCCGTGTAAATGAAGTAATAACTATGTTGGTTGTTATGTAA
Protein sequenceShow/hide protein sequence
MIQYCKTKSYFATLADSFLAYLDELSNVNKFQVSKGFLLLRVNEVITMLVVM