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IVF0024775 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024775
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTranscription factor UPBEAT1
Genome locationchr01:29562234..29563189
RNA-Seq ExpressionIVF0024775
SyntenyIVF0024775
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046707.1 transcription factor UPBEAT1 [Cucumis melo var. makuwa]6.30e-107100Show/hide
Query:  MGVSQETLLQIQLNMEDHKTTQDRIIIIKEIRNDSSNDQSIWKKKSMKEEVGEEEDQEINSKGKDKSTCNNINTRRTTRRRSRSNSLILKKRSRRSSSSS
        MGVSQETLLQIQLNMEDHKTTQDRIIIIKEIRNDSSNDQSIWKKKSMKEEVGEEEDQEINSKGKDKSTCNNINTRRTTRRRSRSNSLILKKRSRRSSSSS
Subjt:  MGVSQETLLQIQLNMEDHKTTQDRIIIIKEIRNDSSNDQSIWKKKSMKEEVGEEEDQEINSKGKDKSTCNNINTRRTTRRRSRSNSLILKKRSRRSSSSS

Query:  SSTSRIEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
        SSTSRIEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
Subjt:  SSTSRIEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE

KAG6575752.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]3.61e-2248.24Show/hide
Query:  MGVSQETLLQIQLNMEDHKTTQDRIIIIKEIRNDSSNDQSIWKKKSMKEEVGEEEDQEINSKGKDKSTCNNINTRRTTRRRSRSNSLILKKRSRRSSSSS
        MG    TLL +QLNME+   TQD II           + SI KK SM+EE             K+  +C          RR R  S  L K++RRSS+  
Subjt:  MGVSQETLLQIQLNMEDHKTTQDRIIIIKEIRNDSSNDQSIWKKKSMKEEVGEEEDQEINSKGKDKSTCNNINTRRTTRRRSRSNSLILKKRSRRSSSSS

Query:  SSTSRIEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSI
            RI QRV  LRNLVPN +N  D+D +   GSLEQLFT TADYILSLQTRVR M+TLVDVLS  SS I
Subjt:  SSTSRIEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSI

KAG6593250.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]1.59e-2447.62Show/hide
Query:  MGVSQETLLQIQLNMEDHKTTQDRIIIIKEIRNDSSNDQSIWKKKSMKEEVGEEEDQEINSKGKDKSTCNNINTRRTTRRRSRSNSLILKKRSRRSSSSS
        MGV  ETLL +QLNM++   +QD                      SM+E+  ++E QE     + ++   + N     RRR  SNSL+ K+RSR      
Subjt:  MGVSQETLLQIQLNMEDHKTTQDRIIIIKEIRNDSSNDQSIWKKKSMKEEVGEEEDQEINSKGKDKSTCNNINTRRTTRRRSRSNSLILKKRSRRSSSSS

Query:  SSTSRIEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSS
         S++RIEQRV+ LRNLVPN +N+ ++ ESC  GSLEQLFTQTADYILSLQTRVR MK LVDVLS  S+
Subjt:  SSTSRIEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSS

KAG7025601.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.56e-2347.62Show/hide
Query:  MGVSQETLLQIQLNMEDHKTTQDRIIIIKEIRNDSSNDQSIWKKKSMKEEVGEEEDQEINSKGKDKSTCNNINTRRTTRRRSRSNSLILKKRSRRSSSSS
        MGV  ETLL +QLNM++   +QD                      SM+E+  ++E QE  +K                RRR  SNSL+ K+RSR      
Subjt:  MGVSQETLLQIQLNMEDHKTTQDRIIIIKEIRNDSSNDQSIWKKKSMKEEVGEEEDQEINSKGKDKSTCNNINTRRTTRRRSRSNSLILKKRSRRSSSSS

Query:  SSTSRIEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSS
         S++RIEQRV+ LRNLVPN +N+ ++ ESC  GSLEQLFTQTADYILSLQTRVR MK LVDVLS  S+
Subjt:  SSTSRIEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSS

XP_031744332.1 transcription factor UPBEAT1 [Cucumis sativus]4.96e-8086.86Show/hide
Query:  MGVSQETLLQIQLNMEDHKTTQDRIIIIKEIRNDSSNDQSIWKKKSMKEEVGEEEDQEINSKGKD-KSTCNNINTRRTTRRRSRSNSLILKKRSRRSSSS
        MGVSQETLLQIQLNMEDH+TTQDRII IKEIRN++SNDQS WKK SMKEE    E QEINSKGKD KSTCN INTRRTTRRRSRSNSLILKKRSRRSSSS
Subjt:  MGVSQETLLQIQLNMEDHKTTQDRIIIIKEIRNDSSNDQSIWKKKSMKEEVGEEEDQEINSKGKD-KSTCNNINTRRTTRRRSRSNSLILKKRSRRSSSS

Query:  SSSTSRIEQRVNILRNLVPNNDNHQ--DDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
        SSS  RIEQRVN LR+LVPNNDNH   D DESC  GSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
Subjt:  SSSTSRIEQRVNILRNLVPNNDNHQ--DDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE

TrEMBL top hitse value%identityAlignment
A0A0A0K6D9 Uncharacterized protein2.6e-6086.86Show/hide
Query:  MGVSQETLLQIQLNMEDHKTTQDRIIIIKEIRNDSSNDQSIWKKKSMKEEVGEEEDQEINSKGK-DKSTCNNINTRRTTRRRSRSNSLILKKRSRRSSSS
        MGVSQETLLQIQLNMEDH+TTQDRII IKEIRN++SNDQS WKK SMK    EEE QEINSKGK DKSTC NINTRRTTRRRSRSNSLILKKRSRRSSSS
Subjt:  MGVSQETLLQIQLNMEDHKTTQDRIIIIKEIRNDSSNDQSIWKKKSMKEEVGEEEDQEINSKGK-DKSTCNNINTRRTTRRRSRSNSLILKKRSRRSSSS

Query:  SSSTSRIEQRVNILRNLVPNND--NHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
        SS  SRIEQRVN LR+LVPNND  NH D DESC  GSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
Subjt:  SSSTSRIEQRVNILRNLVPNND--NHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE

A0A314YEL7 Transcription factor UPBEAT11.0e-0338.79Show/hide
Query:  INSKGKDKSTCNNINTRRTTRRRSRSNSLILKKR--SRRSSSSSSSTSRIEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLM
        + ++GK  +  N +N    T +R R    ILKKR   RR   +    + I++RV IL+ L+PN D         ++  L+ LF++TADYILSLQ+RVRL+
Subjt:  INSKGKDKSTCNNINTRRTTRRRSRSNSLILKKR--SRRSSSSSSSTSRIEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLM

Query:  KTLVDVLSDPSSSIDE
        + +V  L+ P+S  DE
Subjt:  KTLVDVLSDPSSSIDE

A0A314ZKL5 Transcription factor UPBEAT14.5e-0440.68Show/hide
Query:  INSKGKDKSTCNNIN--TRRTTRRRSRSNSLILKKR--SRRSSSSSSSTSRIEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVR
        I ++GK  +  N +N  TR   RRR      ILKKR   RR   +    + I++RV IL+ L+PN D         ++  L+ LF++TADYILSLQ+RVR
Subjt:  INSKGKDKSTCNNIN--TRRTTRRRSRSNSLILKKR--SRRSSSSSSSTSRIEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVR

Query:  LMKTLVDVLSDPSSSIDE
        L++ +V  L+ P+S  DE
Subjt:  LMKTLVDVLSDPSSSIDE

A0A5A7TXU1 Transcription factor UPBEAT11.0e-80100Show/hide
Query:  MGVSQETLLQIQLNMEDHKTTQDRIIIIKEIRNDSSNDQSIWKKKSMKEEVGEEEDQEINSKGKDKSTCNNINTRRTTRRRSRSNSLILKKRSRRSSSSS
        MGVSQETLLQIQLNMEDHKTTQDRIIIIKEIRNDSSNDQSIWKKKSMKEEVGEEEDQEINSKGKDKSTCNNINTRRTTRRRSRSNSLILKKRSRRSSSSS
Subjt:  MGVSQETLLQIQLNMEDHKTTQDRIIIIKEIRNDSSNDQSIWKKKSMKEEVGEEEDQEINSKGKDKSTCNNINTRRTTRRRSRSNSLILKKRSRRSSSSS

Query:  SSTSRIEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
        SSTSRIEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
Subjt:  SSTSRIEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE

SwissProt top hitse value%identityAlignment
O22901 Transcription factor UPBEAT15.6e-0440Show/hide
Query:  RRSRSNSLILKK---RSRRSSSSSSSTSR-IEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSD
        RR R+   ++KK   R R+S  +S    R I +RV  L+ LVPN           T+  L+ LF QTADYIL+L+ +V++M+T+V VL++
Subjt:  RRSRSNSLILKK---RSRRSSSSSSSTSR-IEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSD

Arabidopsis top hitse value%identityAlignment
AT2G47270.1 sequence-specific DNA binding transcription factors;transcription regulators4.0e-0540Show/hide
Query:  RRSRSNSLILKK---RSRRSSSSSSSTSR-IEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSD
        RR R+   ++KK   R R+S  +S    R I +RV  L+ LVPN           T+  L+ LF QTADYIL+L+ +V++M+T+V VL++
Subjt:  RRSRSNSLILKK---RSRRSSSSSSSTSR-IEQRVNILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTTTCCCAAGAAACCCTTTTGCAAATTCAACTCAACATGGAAGATCATAAAACAACACAAGATCGCATCATCATCATCAAAGAGATCAGGAACGACAGCTCAAA
TGATCAATCCATATGGAAGAAAAAATCAATGAAAGAAGAAGTAGGAGAAGAGGAAGATCAAGAAATTAATAGCAAAGGCAAAGACAAAAGTACTTGCAATAATATTAACA
CAAGAAGAACGACAAGAAGAAGATCAAGAAGCAATTCATTGATATTGAAGAAGAGATCGAGAAGATCATCATCATCATCATCATCAACAAGTAGAATAGAGCAAAGGGTC
AACATTTTGAGAAATCTTGTACCAAACAACGACAACCACCAGGACGATGACGAAAGCTGTACTGCCGGATCATTAGAACAGCTTTTCACTCAAACAGCTGATTACATATT
GTCATTACAAACAAGAGTCAGATTGATGAAGACTTTGGTTGATGTCTTGTCTGATCCTTCTTCTTCTATTGATGAGTGA
mRNA sequenceShow/hide mRNA sequence
CCCCTCTAGCCTCCACTACCTTCATCATTCAAAATCTCAATCCCAAACCCCATTTTCCCCTCTCTCTCTATTTCTCTAGTTTCTTAACCAAAAGTGAAAAAGAAGGGAAA
AAAATACCACAAAACCAAATGGGAGTTTCCCAAGAAACCCTTTTGCAAATTCAACTCAACATGGAAGATCATAAAACAACACAAGATCGCATCATCATCATCAAAGAGAT
CAGGAACGACAGCTCAAATGATCAATCCATATGGAAGAAAAAATCAATGAAAGAAGAAGTAGGAGAAGAGGAAGATCAAGAAATTAATAGCAAAGGCAAAGACAAAAGTA
CTTGCAATAATATTAACACAAGAAGAACGACAAGAAGAAGATCAAGAAGCAATTCATTGATATTGAAGAAGAGATCGAGAAGATCATCATCATCATCATCATCAACAAGT
AGAATAGAGCAAAGGGTCAACATTTTGAGAAATCTTGTACCAAACAACGACAACCACCAGGACGATGACGAAAGCTGTACTGCCGGATCATTAGAACAGCTTTTCACTCA
AACAGCTGATTACATATTGTCATTACAAACAAGAGTCAGATTGATGAAGACTTTGGTTGATGTCTTGTCTGATCCTTCTTCTTCTATTGATGAGTGAGAGAATTTGAAAA
AAAAAAGAAAGTTTCATTTTATTTTTTATTTTTATATATATATTTGTGTTTAATTTGTGTAAAACTTATATCATTATCTCTCTTCTGTAAAGATTGATATATGTGATTTT
ATATATATCATTCTTTTGCTTTTCTTTTTTTTTTTGTTGGTTCTTTTTCTCTTACTTTTGCTTTATTGATCATTTGTCTTTGAAATGTCTCTGTAGTTTTAGAGAGAGAA
TTTTAACTCTTTTTTCTTTGGGTGTGTGGAAAAGATTTGACTTTTGATTATAAGAAGTTATTTAGGGACATTGGGG
Protein sequenceShow/hide protein sequence
MGVSQETLLQIQLNMEDHKTTQDRIIIIKEIRNDSSNDQSIWKKKSMKEEVGEEEDQEINSKGKDKSTCNNINTRRTTRRRSRSNSLILKKRSRRSSSSSSSTSRIEQRV
NILRNLVPNNDNHQDDDESCTAGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE