; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0024811 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0024811
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr07:18777723..18779173
RNA-Seq ExpressionIVF0024811
SyntenyIVF0024811
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036942.1 uncharacterized protein E6C27_scaffold86G00180 [Cucumis melo var. makuwa]3.55e-28085.29Show/hide
Query:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGS-
        +NV QSQTTQHYV TN LYVVPP++P I+HLEAQAKIQDM QNENTPAKQKLDVLEERLRAIE TDVYGNI+ATQLCLV GLIIP KFK+PE DKYDGS 
Subjt:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGS-

Query:  -------LY----GAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ
               +Y      +INNDKLLVHCF  SLT PASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMA DRLDLQ++EKKSSESF EYAQRWRDM AEVQ
Subjt:  -------LY----GAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ

Query:  PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS
        PPLTDKEMTSMFMN LRAPFY RMIGNASTNFSDIIVIGERIEY IKHGRL EATTEYGGIKKGTISKKKEGEVH IGFPNSGKHKSIFGQRKYEQNFPS
Subjt:  PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS

Query:  YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH
        YISNVSHIPYNSYVP HTVSETPK +  NSPRPFVQGQGSKTNSDTWRFDP+PMTYTELLPQLIQNRQLA IP+IPIQPPYPKWYDSNARCDYHAG  GH
Subjt:  YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH

Query:  STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHL
        STENC ALKR VQSLIN GWLSFKKSGE+ NV ENPLP+HENPK N VD LVEKC+NEVHEIV+ M  L
Subjt:  STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHL

KAA0036957.1 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa]6.72e-27284.65Show/hide
Query:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGS-
        +NV QSQTTQHYV TN LYVVPP++P I+HLEAQAKIQDM QNENTPAKQKLDVLEERLRAIE TDVYGNI+ATQLCLV GLIIP KFK+PE DKYDGS 
Subjt:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGS-

Query:  -------LY----GAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ
               +Y      +INNDKLLVHCF  SLT PASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMA D LDLQ+MEKKSSESF EYAQRWRDM AEVQ
Subjt:  -------LY----GAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ

Query:  PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS
        PPLTDKEMTSMFMN LRAPFY RMIGNASTNFSDIIVIGERIEY IKHGRL EATTEYG IKKGTISKKKEGEVH IGFPNSGKHKSIFGQRKYEQNFPS
Subjt:  PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS

Query:  YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH
        YISNVSHIPYNSYVP HTVSETPK +  NSPRPFVQGQGSKTNSDTWRFDP+PMTYTE+LPQLIQNRQLA IP+IPIQPPY KWYDSNARCDYHAG  GH
Subjt:  YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH

Query:  STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHL
        S ENC ALKR VQSLINVGWLSFKKSGE+ NV ENPLP+HENPK NAVD  VEKCKNE+HEIV+ M  L
Subjt:  STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHL

KAA0060421.1 uncharacterized protein E6C27_scaffold22G002400 [Cucumis melo var. makuwa]4.44e-28485.29Show/hide
Query:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGS-
        MNV QSQTTQHY+ T+ LYVVPP+VP ++HLEAQAKIQDM QNENT AKQKLDVLEERLRAIEGTDVYGNI+ATQLCLV GLIIP KFK+PE DKYDGS 
Subjt:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGS-

Query:  -------LY----GAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ
               +Y      +INNDKLLVHCF  SLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMA +RLDLQ+MEKKSSESF EYAQRW+DM AEVQ
Subjt:  -------LY----GAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ

Query:  PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS
        PPLTDKEMTSMFMN LRAPFY RMIGNASTNFSDIIVIGERIEY IKHGRL E TTEYGGIKKGTISKKKEGE+H IGFPNSGKHKSIFGQRKYEQNFPS
Subjt:  PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS

Query:  YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH
        YISNVS+IPYNSYVP HTVSETPK +  NSPRPFVQGQGSK NSDTWRFDP+PMTYTELLPQLIQNRQLA IP+IPIQPPYPKWYDSNARCDYHAG  GH
Subjt:  YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH

Query:  STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHL
        STENC ALKR VQSLIN GWLSFKKSGE+PNVNENPLPNHENPK NAVD LVEKCKNEVHEIV+ M  L
Subjt:  STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHL

TYK16441.1 uncharacterized protein E5676_scaffold21G002390 [Cucumis melo var. makuwa]0.097.1Show/hide
Query:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGSL
        MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGSL
Subjt:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGSL

Query:  ------------YGAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ
                      AYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ
Subjt:  ------------YGAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ

Query:  PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS
        PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS
Subjt:  PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS

Query:  YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH
        YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH
Subjt:  YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH

Query:  STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHLLKVFLKQDMLVRNI
        STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHLLKVFLKQDMLVRNI
Subjt:  STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHLLKVFLKQDMLVRNI

TYK23633.1 uncharacterized protein E5676_scaffold4336G00020 [Cucumis melo var. makuwa]1.04e-25776.76Show/hide
Query:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGS-
        MNV QSQTTQHY+ TN +YVVPP+VP I+HLE                               GTDVYGNI+ATQLCLV GLIIP KFK+PE DKYD S 
Subjt:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGS-

Query:  -------LY----GAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ
               +Y      +IN DKLLVHCF  SLTGP +RWYIQLDNAHIHVWKDLADAFLKQYKHNIDM  D LDLQ+MEKKSS+SF EYAQRWRD+  EVQ
Subjt:  -------LY----GAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ

Query:  PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS
        PPLTDKEMT +FMN LRAPFY RMIGNASTNFSDIIVIGERIEY IKHGRL EATTEYGGIKKGTISKKKEGEVH IGFPNSGKHKSIF QRKYEQNFPS
Subjt:  PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS

Query:  YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH
        YISNVSHIPYNSYVP HTVSET K +  NSPRPFVQGQGSKTNSDTWRFDP+PMTYTELLPQLIQNRQLA IP+IPIQPPYPKWYDSNARCDYHAG   H
Subjt:  YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH

Query:  STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHL
        STENC ALKR VQ LIN GWLSFKKSGE+PNV ENPLP+HENPK N VD+LVEKCKNEVHEIV+ M  L
Subjt:  STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHL

TrEMBL top hitse value%identityAlignment
A0A5A7T0H8 Uncharacterized protein6.5e-23184.71Show/hide
Query:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGSL
        +NV QSQTTQHYV TN LYVVPP++P I+HLEAQAKIQDM QNENTPAKQKLDVLEERLRAIE TDVYGNI+ATQLCLV GLIIP KFK+PE DKYDGS 
Subjt:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGSL

Query:  ------------YGAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ
                       +INNDKLLVHCF  SLT PASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMA DRLDLQ++EKKSSESF EYAQRWRDM AEVQ
Subjt:  ------------YGAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ

Query:  PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS
        PPLTDKEMTSMFMN LRAPFY RMIGNASTNFSDIIVIGERIEY IKHGRL EATTEYGGIKKGTISKKKEGEVH IGFPNSGKHKSIFGQRKYEQNFPS
Subjt:  PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS

Query:  YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH
        YISNVSHIPYNSYVP HTVSETPK +  NSPRPFVQGQGSKTNSDTWRFDP+PMTYTELLPQLIQNRQLA IP+IPIQPPYPKWYDSNARCDYHAG  GH
Subjt:  YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH

Query:  STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHLLK
        STENC ALKR VQSLIN GWLSFKKSGE+ NV ENPLP+HENPK N VD LVEKC+NEVHEIV+ M  L +
Subjt:  STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHLLK

A0A5A7T5W6 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein1.0e-22884.08Show/hide
Query:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGSL
        +NV QSQTTQHYV TN LYVVPP++P I+HLEAQAKIQDM QNENTPAKQKLDVLEERLRAIE TDVYGNI+ATQLCLV GLIIP KFK+PE DKYDGS 
Subjt:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGSL

Query:  ------------YGAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ
                       +INNDKLLVHCF  SLT PASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMA D LDLQ+MEKKSSESF EYAQRWRDM AEVQ
Subjt:  ------------YGAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ

Query:  PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS
        PPLTDKEMTSMFMN LRAPFY RMIGNASTNFSDIIVIGERIEY IKHGRL EATTEYG IKKGTISKKKEGEVH IGFPNSGKHKSIFGQRKYEQNFPS
Subjt:  PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS

Query:  YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH
        YISNVSHIPYNSYVP HTVSETPK +  NSPRPFVQGQGSKTNSDTWRFDP+PMTYTE+LPQLIQNRQLA IP+IPIQPPY KWYDSNARCDYHAG  GH
Subjt:  YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH

Query:  STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHLLK
        S ENC ALKR VQSLINVGWLSFKKSGE+ NV ENPLP+HENPK NAVD  VEKCKNE+HEIV+ M  L +
Subjt:  STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHLLK

A0A5A7V3W7 Retrotrans_gag domain-containing protein1.0e-23184.71Show/hide
Query:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGSL
        MNV QSQTTQHY+ T+ LYVVPP+VP ++HLEAQAKIQDM QNENT AKQKLDVLEERLRAIEGTDVYGNI+ATQLCLV GLIIP KFK+PE DKYDGS 
Subjt:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGSL

Query:  ------------YGAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ
                       +INNDKLLVHCF  SLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMA +RLDLQ+MEKKSSESF EYAQRW+DM AEVQ
Subjt:  ------------YGAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ

Query:  PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS
        PPLTDKEMTSMFMN LRAPFY RMIGNASTNFSDIIVIGERIEY IKHGRL E TTEYGGIKKGTISKKKEGE+H IGFPNSGKHKSIFGQRKYEQNFPS
Subjt:  PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS

Query:  YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH
        YISNVS+IPYNSYVP HTVSETPK +  NSPRPFVQGQGSK NSDTWRFDP+PMTYTELLPQLIQNRQLA IP+IPIQPPYPKWYDSNARCDYHAG  GH
Subjt:  YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH

Query:  STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHLLK
        STENC ALKR VQSLIN GWLSFKKSGE+PNVNENPLPNHENPK NAVD LVEKCKNEVHEIV+ M  L +
Subjt:  STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHLLK

A0A5D3CWZ3 Retrotrans_gag domain-containing protein9.9e-27297.1Show/hide
Query:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGSL
        MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGSL
Subjt:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGSL

Query:  ------------YGAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ
                      AYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ
Subjt:  ------------YGAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQ

Query:  PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS
        PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS
Subjt:  PPLTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPS

Query:  YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH
        YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH
Subjt:  YISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGH

Query:  STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHLLKVFLKQDMLVRNI
        STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHLLKVFLKQDMLVRNI
Subjt:  STENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHLLKVFLKQDMLVRNI

A0A5D3DEB3 Retrotrans_gag domain-containing protein7.2e-20676.97Show/hide
Query:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGS-
        MNV QSQT QHYV TN LYVVPP+V  I+HLEAQAKIQDM QNENTPAKQKLDVLEERL+ IEGTDVYGNI+ATQLCLV GLIIP KFK+P+ +KYDGS 
Subjt:  MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGS-

Query:  -------LY--GAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQPP
               +Y     INNDKLLVHCF  SLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMA DRLDLQ+MEKKSSESF EYAQRWRDM AEVQPP
Subjt:  -------LY--GAYINNDKLLVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQPP

Query:  LTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPSYI
        LTDKEMTSMFMN LRAPFY RMI                           +ATTEYG IKKGTISKKKEGEVH IGFPNSGKHKSIFGQRKYEQNFPSYI
Subjt:  LTDKEMTSMFMNILRAPFYVRMIGNASTNFSDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPSYI

Query:  SNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGHST
        SNVS+IPYNSYV  HTVSETPK +  NSP+PFVQ QGSKTNSDTWRFDP+PMTYTELLPQLIQNRQLA IP+IPI+PPYPKW+DSNARCDYHAG  GHST
Subjt:  SNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKTNSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGHST

Query:  ENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHLLKV-FLKQDMLVRNI
        ENC ALKRKVQSLIN GWLSFKKSGE+PNVNENPL +HENPK N VD LVEKCK+EVHEIV+ M  L +  ++  + L  NI
Subjt:  ENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLVEKCKNEVHEIVIAMNHLLKV-FLKQDMLVRNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGTTTCGCAGTCTCAAACCACTCAACACTATGTTGCTACGAATCTGTTGTATGTTGTTCCACCTCTTGTCCCAAGTATAAAACATTTGGAAGCTCAAGCTAAAAT
TCAAGACATGAGACAAAATGAGAACACTCCGGCTAAGCAAAAGCTGGATGTTTTGGAAGAAAGGTTGCGAGCAATTGAAGGAACCGATGTCTATGGAAATATAAATGCAA
CACAATTGTGCTTGGTGTCAGGCTTGATCATTCCAACAAAGTTTAAAATTCCTGAAATTGATAAATATGATGGATCATTGTATGGCGCGTATATTAATAATGATAAATTG
CTAGTTCATTGCTTCTATTATAGCTTGACTGGTCCAGCTAGTCGATGGTATATTCAATTAGATAATGCACACATTCATGTTTGGAAGGACTTAGCTGATGCATTTCTAAA
GCAATACAAACACAACATTGATATGGCTCTAGATCGTTTAGACTTGCAACAGATGGAGAAGAAGAGTTCGGAAAGCTTCAATGAATATGCTCAACGATGGAGAGATATGC
CTGCCGAGGTTCAGCCACCGTTAACAGACAAAGAAATGACATCTATGTTTATGAATATCTTGCGGGCTCCATTCTATGTTCGAATGATTGGTAATGCATCAACAAATTTT
TCTGACATTATTGTTATTGGCGAAAGAATTGAATATGAGATAAAACACGGGAGGTTAACAGAGGCTACAACTGAATATGGTGGAATAAAGAAAGGAACAATATCTAAGAA
GAAAGAAGGAGAGGTTCATACAATTGGTTTTCCTAATTCAGGGAAACACAAATCAATTTTTGGTCAGAGAAAATATGAGCAAAACTTTCCGTCATATATAAGCAATGTTT
CTCATATTCCTTATAATAGCTATGTACCAGTCCATACCGTCTCTGAAACTCCAAAACTCATTATCTTAAATTCTCCTCGACCATTTGTACAGGGTCAAGGTAGCAAGACC
AATTCAGATACATGGCGATTTGATCCAGTTCCTATGACTTATACAGAGCTTTTACCTCAGCTAATTCAAAATCGACAGTTAGCTCTTATTCCAATTATTCCTATACAACC
TCCTTACCCAAAATGGTATGATTCAAATGCTCGATGTGATTATCATGCTGGAGAAGCGGGACACTCAACTGAAAATTGTTCGGCTTTGAAAAGAAAGGTGCAATCTTTAA
TTAATGTTGGATGGTTGAGCTTCAAAAAATCTGGTGAGAGGCCGAATGTCAATGAAAATCCATTGCCTAATCATGAAAATCCAAAAGCGAACGCTGTGGATGACCTTGTT
GAAAAGTGCAAAAATGAAGTCCATGAGATTGTGATAGCTATGAATCACTTATTGAAGGTCTTTTTGAAGCAGGATATGTTAGTCAGGAATATCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATGTTTCGCAGTCTCAAACCACTCAACACTATGTTGCTACGAATCTGTTGTATGTTGTTCCACCTCTTGTCCCAAGTATAAAACATTTGGAAGCTCAAGCTAAAAT
TCAAGACATGAGACAAAATGAGAACACTCCGGCTAAGCAAAAGCTGGATGTTTTGGAAGAAAGGTTGCGAGCAATTGAAGGAACCGATGTCTATGGAAATATAAATGCAA
CACAATTGTGCTTGGTGTCAGGCTTGATCATTCCAACAAAGTTTAAAATTCCTGAAATTGATAAATATGATGGATCATTGTATGGCGCGTATATTAATAATGATAAATTG
CTAGTTCATTGCTTCTATTATAGCTTGACTGGTCCAGCTAGTCGATGGTATATTCAATTAGATAATGCACACATTCATGTTTGGAAGGACTTAGCTGATGCATTTCTAAA
GCAATACAAACACAACATTGATATGGCTCTAGATCGTTTAGACTTGCAACAGATGGAGAAGAAGAGTTCGGAAAGCTTCAATGAATATGCTCAACGATGGAGAGATATGC
CTGCCGAGGTTCAGCCACCGTTAACAGACAAAGAAATGACATCTATGTTTATGAATATCTTGCGGGCTCCATTCTATGTTCGAATGATTGGTAATGCATCAACAAATTTT
TCTGACATTATTGTTATTGGCGAAAGAATTGAATATGAGATAAAACACGGGAGGTTAACAGAGGCTACAACTGAATATGGTGGAATAAAGAAAGGAACAATATCTAAGAA
GAAAGAAGGAGAGGTTCATACAATTGGTTTTCCTAATTCAGGGAAACACAAATCAATTTTTGGTCAGAGAAAATATGAGCAAAACTTTCCGTCATATATAAGCAATGTTT
CTCATATTCCTTATAATAGCTATGTACCAGTCCATACCGTCTCTGAAACTCCAAAACTCATTATCTTAAATTCTCCTCGACCATTTGTACAGGGTCAAGGTAGCAAGACC
AATTCAGATACATGGCGATTTGATCCAGTTCCTATGACTTATACAGAGCTTTTACCTCAGCTAATTCAAAATCGACAGTTAGCTCTTATTCCAATTATTCCTATACAACC
TCCTTACCCAAAATGGTATGATTCAAATGCTCGATGTGATTATCATGCTGGAGAAGCGGGACACTCAACTGAAAATTGTTCGGCTTTGAAAAGAAAGGTGCAATCTTTAA
TTAATGTTGGATGGTTGAGCTTCAAAAAATCTGGTGAGAGGCCGAATGTCAATGAAAATCCATTGCCTAATCATGAAAATCCAAAAGCGAACGCTGTGGATGACCTTGTT
GAAAAGTGCAAAAATGAAGTCCATGAGATTGTGATAGCTATGAATCACTTATTGAAGGTCTTTTTGAAGCAGGATATGTTAGTCAGGAATATCTAG
Protein sequenceShow/hide protein sequence
MNVSQSQTTQHYVATNLLYVVPPLVPSIKHLEAQAKIQDMRQNENTPAKQKLDVLEERLRAIEGTDVYGNINATQLCLVSGLIIPTKFKIPEIDKYDGSLYGAYINNDKL
LVHCFYYSLTGPASRWYIQLDNAHIHVWKDLADAFLKQYKHNIDMALDRLDLQQMEKKSSESFNEYAQRWRDMPAEVQPPLTDKEMTSMFMNILRAPFYVRMIGNASTNF
SDIIVIGERIEYEIKHGRLTEATTEYGGIKKGTISKKKEGEVHTIGFPNSGKHKSIFGQRKYEQNFPSYISNVSHIPYNSYVPVHTVSETPKLIILNSPRPFVQGQGSKT
NSDTWRFDPVPMTYTELLPQLIQNRQLALIPIIPIQPPYPKWYDSNARCDYHAGEAGHSTENCSALKRKVQSLINVGWLSFKKSGERPNVNENPLPNHENPKANAVDDLV
EKCKNEVHEIVIAMNHLLKVFLKQDMLVRNI